EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000001371 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 18911 bases
Position: chrOOHO01000014.1:10728378-10747288
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000001933	zf-met	PF12874.7	2e-26	1	4
ENSATEP00000001933	zf-met	PF12874.7	2e-26	2	4
ENSATEP00000001933	zf-met	PF12874.7	2e-26	3	4
ENSATEP00000001933	zf-met	PF12874.7	2e-26	4	4
ENSATEP00000001933	zf-C2H2_jaz	PF12171.8	2.6e-20	1	2
ENSATEP00000001933	zf-C2H2_jaz	PF12171.8	2.6e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000001956	-	675	-	ENSATEP00000001933	224 (aa)	-	-

Gene Model

Click here to download ENSATEG00000001371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000001371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000001371	zgc:171482	100	64.286	ENSATEG00000012630	zmat4a	76	72.477
ENSATEG00000001371	zgc:171482	96	42.731	ENSATEG00000022779	znf346	70	42.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000001371	zgc:171482	100	87.946	ENSAPOG00000019970	zgc:171482	100	87.946	Acanthochromis_polyacanthus
ENSATEG00000001371	zgc:171482	79	95.082	ENSACIG00000021512	zgc:171482	86	98.261	Amphilophus_citrinellus
ENSATEG00000001371	zgc:171482	79	93.600	ENSAOCG00000000751	zgc:171482	85	97.391	Amphiprion_ocellaris
ENSATEG00000001371	zgc:171482	79	89.474	ENSAPEG00000014154	zgc:171482	83	97.391	Amphiprion_percula
ENSATEG00000001371	zgc:171482	79	94.215	ENSACLG00000010511	zgc:171482	80	96.522	Astatotilapia_calliptera
ENSATEG00000001371	zgc:171482	100	83.036	ENSAMXG00000002299	zgc:171482	100	83.482	Astyanax_mexicanus
ENSATEG00000001371	zgc:171482	100	69.822	ENSCSEG00000006509	zgc:171482	100	94.783	Cynoglossus_semilaevis
ENSATEG00000001371	zgc:171482	100	87.826	ENSCVAG00000013606	zgc:171482	100	88.546	Cyprinodon_variegatus
ENSATEG00000001371	zgc:171482	99	83.550	ENSDARG00000074415	zgc:171482	97	82.301	Danio_rerio
ENSATEG00000001371	zgc:171482	81	65.241	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSATEG00000001371	zgc:171482	79	93.277	ENSELUG00000021817	zgc:171482	81	96.429	Esox_lucius
ENSATEG00000001371	zgc:171482	100	87.225	ENSFHEG00000002233	zgc:171482	90	97.391	Fundulus_heteroclitus
ENSATEG00000001371	zgc:171482	100	85.714	ENSGMOG00000010508	zgc:171482	100	84.821	Gadus_morhua
ENSATEG00000001371	zgc:171482	100	96.667	ENSGAFG00000009398	zgc:171482	100	98.261	Gambusia_affinis
ENSATEG00000001371	zgc:171482	100	85.776	ENSGACG00000007680	zgc:171482	100	85.345	Gasterosteus_aculeatus
ENSATEG00000001371	zgc:171482	79	94.215	ENSHBUG00000023289	zgc:171482	86	96.522	Haplochromis_burtoni
ENSATEG00000001371	zgc:171482	79	90.083	ENSHCOG00000018086	zgc:171482	86	93.043	Hippocampus_comes
ENSATEG00000001371	zgc:171482	79	93.277	ENSIPUG00000000361	zgc:171482	83	93.913	Ictalurus_punctatus
ENSATEG00000001371	zgc:171482	100	87.336	ENSKMAG00000005077	zgc:171482	86	86.607	Kryptolebias_marmoratus
ENSATEG00000001371	zgc:171482	79	94.215	ENSLBEG00000023823	zgc:171482	90	97.391	Labrus_bergylta
ENSATEG00000001371	zgc:171482	100	81.938	ENSLOCG00000008863	zgc:171482	97	82.456	Lepisosteus_oculatus
ENSATEG00000001371	zgc:171482	88	94.215	ENSMAMG00000001031	zgc:171482	72	96.522	Mastacembelus_armatus
ENSATEG00000001371	zgc:171482	100	82.328	ENSMZEG00005027721	zgc:171482	100	84.513	Maylandia_zebra
ENSATEG00000001371	zgc:171482	79	95.041	ENSMMOG00000010523	zgc:171482	97	97.391	Mola_mola
ENSATEG00000001371	zgc:171482	100	88.646	ENSMALG00000017883	zgc:171482	100	88.646	Monopterus_albus
ENSATEG00000001371	zgc:171482	79	96.552	ENSNBRG00000021035	zgc:171482	85	97.368	Neolamprologus_brichardi
ENSATEG00000001371	zgc:171482	99	87.225	ENSONIG00000018365	zgc:171482	98	87.611	Oreochromis_niloticus
ENSATEG00000001371	zgc:171482	100	86.784	ENSORLG00000007607	zgc:171482	100	86.784	Oryzias_latipes
ENSATEG00000001371	zgc:171482	100	84.348	ENSORLG00020003563	zgc:171482	100	83.843	Oryzias_latipes_hni
ENSATEG00000001371	zgc:171482	100	86.784	ENSORLG00015008552	zgc:171482	100	86.784	Oryzias_latipes_hsok
ENSATEG00000001371	zgc:171482	79	92.800	ENSOMEG00000003526	zgc:171482	81	98.261	Oryzias_melastigma
ENSATEG00000001371	zgc:171482	79	90.909	ENSPKIG00000016244	zgc:171482	82	88.696	Paramormyrops_kingsleyae
ENSATEG00000001371	zgc:171482	79	89.516	ENSPKIG00000015911	-	84	93.913	Paramormyrops_kingsleyae
ENSATEG00000001371	zgc:171482	99	85.774	ENSPMGG00000020230	zgc:171482	100	85.774	Periophthalmus_magnuspinnatus
ENSATEG00000001371	zgc:171482	99	87.866	ENSPFOG00000001974	zgc:171482	96	85.774	Poecilia_formosa
ENSATEG00000001371	zgc:171482	100	88.393	ENSPLAG00000003327	zgc:171482	100	88.393	Poecilia_latipinna
ENSATEG00000001371	zgc:171482	99	95.833	ENSPMEG00000004988	zgc:171482	100	83.111	Poecilia_mexicana
ENSATEG00000001371	zgc:171482	79	95.041	ENSPREG00000019241	zgc:171482	83	98.261	Poecilia_reticulata
ENSATEG00000001371	zgc:171482	79	94.215	ENSPNYG00000007773	zgc:171482	80	96.522	Pundamilia_nyererei
ENSATEG00000001371	zgc:171482	99	82.969	ENSPNAG00000007619	zgc:171482	97	83.043	Pygocentrus_nattereri
ENSATEG00000001371	zgc:171482	79	88.034	ENSSFOG00015016149	zgc:171482	90	89.381	Scleropages_formosus
ENSATEG00000001371	zgc:171482	79	83.465	ENSSFOG00015021238	zgc:171482	78	88.696	Scleropages_formosus
ENSATEG00000001371	zgc:171482	79	90.152	ENSSMAG00000002715	zgc:171482	74	97.391	Scophthalmus_maximus
ENSATEG00000001371	zgc:171482	79	89.630	ENSSDUG00000008773	zgc:171482	81	98.261	Seriola_dumerili
ENSATEG00000001371	zgc:171482	79	95.868	ENSSLDG00000019510	zgc:171482	81	98.261	Seriola_lalandi_dorsalis
ENSATEG00000001371	zgc:171482	79	98.291	ENSSPAG00000013724	zgc:171482	93	98.291	Stegastes_partitus
ENSATEG00000001371	zgc:171482	85	91.667	ENSTRUG00000005705	zgc:171482	71	95.652	Takifugu_rubripes
ENSATEG00000001371	zgc:171482	100	75.439	ENSTNIG00000008679	zgc:171482	100	75.330	Tetraodon_nigroviridis
ENSATEG00000001371	zgc:171482	84	60.294	ENSXETG00000013525	zmat4	83	60.000	Xenopus_tropicalis
ENSATEG00000001371	zgc:171482	100	85.950	ENSXMAG00000002641	zgc:171482	100	64.706	Xiphophorus_maculatus