EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000001527 (Gene tree)
Gene ID: 113170957
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 12064 bases
Position: chrOOHO01000006.1:31413693-31425756
Accession: 113170957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000002212	ResIII	PF04851.15	6.3e-10	1	1
ENSATEP00000002230	ResIII	PF04851.15	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000002254	-	2589	-	ENSATEP00000002230	862 (aa)	-	-
ENSATET00000002236	-	3206	XM_026373288	ENSATEP00000002212	933 (aa)	XP_026229073	UPI000E45C8DD

Gene Model

Click here to download ENSATEG00000001527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000001527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000001527	rad54b	78	43.541	ENSATEG00000006767	rad54l	94	43.541
ENSATEG00000001527	rad54b	62	33.741	ENSATEG00000012969	ercc6l	51	33.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000001527	rad54b	99	54.198	ENSG00000197275	RAD54B	99	54.198	Homo_sapiens
ENSATEG00000001527	rad54b	83	57.844	ENSG00000265817	FSBP	99	58.038	Homo_sapiens
ENSATEG00000001527	rad54b	99	54.317	ENSAMEG00000005834	-	99	54.317	Ailuropoda_melanoleuca
ENSATEG00000001527	rad54b	100	83.790	ENSACIG00000013005	rad54b	100	83.790	Amphilophus_citrinellus
ENSATEG00000001527	rad54b	100	83.957	ENSAOCG00000008523	rad54b	100	84.171	Amphiprion_ocellaris
ENSATEG00000001527	rad54b	100	81.072	ENSAPEG00000001673	rad54b	100	81.072	Amphiprion_percula
ENSATEG00000001527	rad54b	99	56.678	ENSAPLG00000014366	-	99	56.678	Anas_platyrhynchos
ENSATEG00000001527	rad54b	91	60.556	ENSACAG00000003671	-	98	60.606	Anolis_carolinensis
ENSATEG00000001527	rad54b	74	59.443	ENSANAG00000019528	-	99	59.443	Aotus_nancymaae
ENSATEG00000001527	rad54b	100	85.040	ENSACLG00000007826	rad54b	100	85.040	Astatotilapia_calliptera
ENSATEG00000001527	rad54b	90	68.542	ENSAMXG00000039985	rad54b	94	68.314	Astyanax_mexicanus
ENSATEG00000001527	rad54b	99	54.267	ENSBTAG00000000632	RAD54B	99	54.267	Bos_taurus
ENSATEG00000001527	rad54b	82	35.414	WBGene00013792	Y116A8C.13	86	34.194	Caenorhabditis_elegans
ENSATEG00000001527	rad54b	99	54.853	ENSCJAG00000000080	-	99	58.060	Callithrix_jacchus
ENSATEG00000001527	rad54b	99	55.098	ENSCAFG00000009179	RAD54B	99	55.098	Canis_familiaris
ENSATEG00000001527	rad54b	99	55.206	ENSCAFG00020012084	-	99	55.206	Canis_lupus_dingo
ENSATEG00000001527	rad54b	99	54.874	ENSCHIG00000008230	-	99	54.874	Capra_hircus
ENSATEG00000001527	rad54b	99	54.853	ENSTSYG00000013234	-	99	54.853	Carlito_syrichta
ENSATEG00000001527	rad54b	99	54.757	ENSCPOG00000011643	-	99	54.796	Cavia_porcellus
ENSATEG00000001527	rad54b	99	54.684	ENSCCAG00000011754	-	99	58.060	Cebus_capucinus
ENSATEG00000001527	rad54b	99	54.208	ENSCATG00000030661	-	99	58.003	Cercocebus_atys
ENSATEG00000001527	rad54b	99	55.196	ENSCLAG00000010476	-	99	55.196	Chinchilla_lanigera
ENSATEG00000001527	rad54b	99	54.208	ENSCSAG00000012712	-	99	54.208	Chlorocebus_sabaeus
ENSATEG00000001527	rad54b	99	56.457	ENSCPBG00000003204	-	98	58.169	Chrysemys_picta_bellii
ENSATEG00000001527	rad54b	99	54.645	ENSCANG00000017939	-	99	58.413	Colobus_angolensis_palliatus
ENSATEG00000001527	rad54b	99	54.977	ENSCGRG00001020184	Rad54b	99	54.977	Cricetulus_griseus_chok1gshd
ENSATEG00000001527	rad54b	99	53.013	ENSCGRG00000016752	Rad54b	99	53.013	Cricetulus_griseus_crigri
ENSATEG00000001527	rad54b	99	82.407	ENSCSEG00000001601	rad54b	99	85.894	Cynoglossus_semilaevis
ENSATEG00000001527	rad54b	100	81.050	ENSCVAG00000009200	rad54b	100	81.050	Cyprinodon_variegatus
ENSATEG00000001527	rad54b	99	64.009	ENSDARG00000092134	rad54b	99	70.000	Danio_rerio
ENSATEG00000001527	rad54b	99	54.468	ENSDNOG00000015535	-	99	54.733	Dasypus_novemcinctus
ENSATEG00000001527	rad54b	99	56.004	ENSDORG00000002492	Rad54b	99	56.166	Dipodomys_ordii
ENSATEG00000001527	rad54b	87	57.377	ENSETEG00000010605	-	100	57.377	Echinops_telfairi
ENSATEG00000001527	rad54b	99	47.671	ENSEBUG00000009104	rad54b	98	47.619	Eptatretus_burgeri
ENSATEG00000001527	rad54b	90	58.543	ENSEASG00005004021	-	89	58.543	Equus_asinus_asinus
ENSATEG00000001527	rad54b	99	54.457	ENSECAG00000021949	-	99	54.457	Equus_caballus
ENSATEG00000001527	rad54b	75	50.314	ENSEEUG00000008056	-	72	50.314	Erinaceus_europaeus
ENSATEG00000001527	rad54b	100	72.899	ENSELUG00000009287	rad54b	100	72.689	Esox_lucius
ENSATEG00000001527	rad54b	99	54.466	ENSFCAG00000015513	-	99	59.072	Felis_catus
ENSATEG00000001527	rad54b	99	56.678	ENSFALG00000005467	-	99	56.678	Ficedula_albicollis
ENSATEG00000001527	rad54b	99	54.189	ENSFDAG00000020541	-	99	54.189	Fukomys_damarensis
ENSATEG00000001527	rad54b	94	80.220	ENSFHEG00000014382	rad54b	90	80.437	Fundulus_heteroclitus
ENSATEG00000001527	rad54b	90	82.449	ENSGMOG00000014774	rad54b	99	82.702	Gadus_morhua
ENSATEG00000001527	rad54b	99	56.707	ENSGALG00000043597	RAD54B	99	56.707	Gallus_gallus
ENSATEG00000001527	rad54b	99	82.019	ENSGAFG00000007901	rad54b	98	83.730	Gambusia_affinis
ENSATEG00000001527	rad54b	99	78.182	ENSGACG00000009128	rad54b	99	77.861	Gasterosteus_aculeatus
ENSATEG00000001527	rad54b	99	56.172	ENSGAGG00000018747	-	99	56.172	Gopherus_agassizii
ENSATEG00000001527	rad54b	99	54.098	ENSGGOG00000023516	-	99	54.098	Gorilla_gorilla
ENSATEG00000001527	rad54b	100	84.154	ENSHBUG00000016017	rad54b	99	83.940	Haplochromis_burtoni
ENSATEG00000001527	rad54b	99	53.846	ENSHGLG00000008263	RAD54B	99	53.846	Heterocephalus_glaber_female
ENSATEG00000001527	rad54b	99	53.175	ENSHGLG00100008108	-	99	53.175	Heterocephalus_glaber_male
ENSATEG00000001527	rad54b	99	74.219	ENSHCOG00000004764	rad54b	98	76.654	Hippocampus_comes
ENSATEG00000001527	rad54b	99	62.137	ENSIPUG00000018531	rad54b	99	62.008	Ictalurus_punctatus
ENSATEG00000001527	rad54b	99	53.465	ENSSTOG00000010791	-	99	53.465	Ictidomys_tridecemlineatus
ENSATEG00000001527	rad54b	99	53.370	ENSJJAG00000010314	Rad54b	99	53.261	Jaculus_jaculus
ENSATEG00000001527	rad54b	100	77.880	ENSKMAG00000004744	rad54b	100	77.880	Kryptolebias_marmoratus
ENSATEG00000001527	rad54b	86	63.249	ENSLACG00000000859	-	100	63.515	Latimeria_chalumnae
ENSATEG00000001527	rad54b	99	63.319	ENSLOCG00000010100	rad54b	94	68.165	Lepisosteus_oculatus
ENSATEG00000001527	rad54b	90	57.107	ENSLAFG00000015315	-	97	57.107	Loxodonta_africana
ENSATEG00000001527	rad54b	99	54.208	ENSMFAG00000031629	-	99	58.003	Macaca_fascicularis
ENSATEG00000001527	rad54b	99	54.208	ENSMMUG00000005659	-	99	54.208	Macaca_mulatta
ENSATEG00000001527	rad54b	99	53.980	ENSMNEG00000016408	-	99	53.980	Macaca_nemestrina
ENSATEG00000001527	rad54b	99	54.317	ENSMLEG00000006946	-	99	54.317	Mandrillus_leucophaeus
ENSATEG00000001527	rad54b	100	85.747	ENSMAMG00000012269	rad54b	99	85.747	Mastacembelus_armatus
ENSATEG00000001527	rad54b	100	84.154	ENSMZEG00005005281	rad54b	100	83.940	Maylandia_zebra
ENSATEG00000001527	rad54b	99	56.598	ENSMGAG00000012024	-	99	56.598	Meleagris_gallopavo
ENSATEG00000001527	rad54b	99	55.192	ENSMAUG00000013586	Rad54b	99	55.192	Mesocricetus_auratus
ENSATEG00000001527	rad54b	99	55.832	ENSMICG00000000754	-	99	55.832	Microcebus_murinus
ENSATEG00000001527	rad54b	99	54.292	ENSMOCG00000020035	Rad54b	99	54.292	Microtus_ochrogaster
ENSATEG00000001527	rad54b	99	82.633	ENSMMOG00000003394	rad54b	97	85.006	Mola_mola
ENSATEG00000001527	rad54b	90	58.312	ENSMODG00000007343	-	97	58.491	Monodelphis_domestica
ENSATEG00000001527	rad54b	74	88.801	ENSMALG00000001520	rad54b	100	88.801	Monopterus_albus
ENSATEG00000001527	rad54b	99	55.407	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.407	Mus_caroli
ENSATEG00000001527	rad54b	99	55.295	ENSMUSG00000078773	Rad54b	99	55.295	Mus_musculus
ENSATEG00000001527	rad54b	99	55.072	MGP_PahariEiJ_G0023933	Rad54b	99	55.072	Mus_pahari
ENSATEG00000001527	rad54b	99	55.518	MGP_SPRETEiJ_G0026758	Rad54b	99	55.518	Mus_spretus
ENSATEG00000001527	rad54b	90	59.045	ENSMPUG00000008878	-	97	59.097	Mustela_putorius_furo
ENSATEG00000001527	rad54b	99	54.239	ENSMLUG00000008953	-	99	54.239	Myotis_lucifugus
ENSATEG00000001527	rad54b	99	53.905	ENSNGAG00000017537	Rad54b	99	53.905	Nannospalax_galili
ENSATEG00000001527	rad54b	100	85.155	ENSNBRG00000013394	rad54b	100	85.155	Neolamprologus_brichardi
ENSATEG00000001527	rad54b	99	53.762	ENSNLEG00000003062	-	99	57.629	Nomascus_leucogenys
ENSATEG00000001527	rad54b	73	62.500	ENSMEUG00000012426	-	69	62.660	Notamacropus_eugenii
ENSATEG00000001527	rad54b	99	55.275	ENSODEG00000019564	-	99	55.275	Octodon_degus
ENSATEG00000001527	rad54b	79	73.913	ENSODEG00000002650	-	93	73.913	Octodon_degus
ENSATEG00000001527	rad54b	100	85.011	ENSONIG00000006067	rad54b	100	84.797	Oreochromis_niloticus
ENSATEG00000001527	rad54b	86	59.817	ENSOANG00000011348	-	99	59.817	Ornithorhynchus_anatinus
ENSATEG00000001527	rad54b	99	54.180	ENSOCUG00000016478	-	99	54.180	Oryctolagus_cuniculus
ENSATEG00000001527	rad54b	100	77.754	ENSORLG00000008918	rad54b	100	85.581	Oryzias_latipes
ENSATEG00000001527	rad54b	74	85.226	ENSORLG00020012171	rad54b	100	85.426	Oryzias_latipes_hni
ENSATEG00000001527	rad54b	100	77.143	ENSORLG00015018536	rad54b	100	77.143	Oryzias_latipes_hsok
ENSATEG00000001527	rad54b	89	83.399	ENSOMEG00000004345	rad54b	100	83.399	Oryzias_melastigma
ENSATEG00000001527	rad54b	99	52.711	ENSOGAG00000007854	-	99	52.826	Otolemur_garnettii
ENSATEG00000001527	rad54b	90	59.194	ENSOARG00000007691	-	97	59.194	Ovis_aries
ENSATEG00000001527	rad54b	99	52.890	ENSPPAG00000029572	-	99	52.890	Pan_paniscus
ENSATEG00000001527	rad54b	99	53.913	ENSPPRG00000007571	-	99	58.799	Panthera_pardus
ENSATEG00000001527	rad54b	83	58.663	ENSPTIG00000012670	-	99	58.663	Panthera_tigris_altaica
ENSATEG00000001527	rad54b	99	53.980	ENSPTRG00000020427	-	99	57.766	Pan_troglodytes
ENSATEG00000001527	rad54b	99	54.208	ENSPANG00000019566	-	99	54.208	Papio_anubis
ENSATEG00000001527	rad54b	99	64.432	ENSPKIG00000014974	rad54b	99	64.432	Paramormyrops_kingsleyae
ENSATEG00000001527	rad54b	99	56.399	ENSPSIG00000002383	-	95	61.820	Pelodiscus_sinensis
ENSATEG00000001527	rad54b	99	54.828	ENSPEMG00000012133	Rad54b	99	54.828	Peromyscus_maniculatus_bairdii
ENSATEG00000001527	rad54b	90	58.028	ENSPMAG00000002916	rad54b	98	58.081	Petromyzon_marinus
ENSATEG00000001527	rad54b	94	57.369	ENSPCIG00000020151	-	94	57.143	Phascolarctos_cinereus
ENSATEG00000001527	rad54b	99	83.578	ENSPFOG00000023411	rad54b	98	83.578	Poecilia_formosa
ENSATEG00000001527	rad54b	99	83.456	ENSPLAG00000010430	rad54b	98	83.456	Poecilia_latipinna
ENSATEG00000001527	rad54b	99	83.824	ENSPMEG00000016873	rad54b	98	83.824	Poecilia_mexicana
ENSATEG00000001527	rad54b	99	83.678	ENSPREG00000018443	rad54b	99	83.455	Poecilia_reticulata
ENSATEG00000001527	rad54b	99	53.980	ENSPPYG00000018750	-	99	53.980	Pongo_abelii
ENSATEG00000001527	rad54b	99	54.348	ENSPCOG00000026845	-	99	57.844	Propithecus_coquereli
ENSATEG00000001527	rad54b	85	57.636	ENSPVAG00000000261	-	86	57.656	Pteropus_vampyrus
ENSATEG00000001527	rad54b	91	85.316	ENSPNYG00000018303	rad54b	97	85.316	Pundamilia_nyererei
ENSATEG00000001527	rad54b	99	63.605	ENSPNAG00000000295	rad54b	99	63.605	Pygocentrus_nattereri
ENSATEG00000001527	rad54b	99	55.580	ENSRNOG00000039949	Rad54b	99	55.580	Rattus_norvegicus
ENSATEG00000001527	rad54b	99	54.426	ENSRBIG00000020419	-	99	54.426	Rhinopithecus_bieti
ENSATEG00000001527	rad54b	99	54.426	ENSRROG00000039897	-	99	54.426	Rhinopithecus_roxellana
ENSATEG00000001527	rad54b	87	37.530	YBR073W	RDH54	96	34.238	Saccharomyces_cerevisiae
ENSATEG00000001527	rad54b	99	54.526	ENSSBOG00000028501	-	99	54.526	Saimiri_boliviensis_boliviensis
ENSATEG00000001527	rad54b	99	54.348	ENSSHAG00000017038	-	99	54.348	Sarcophilus_harrisii
ENSATEG00000001527	rad54b	66	71.479	ENSSFOG00015008483	rad54b	89	70.599	Scleropages_formosus
ENSATEG00000001527	rad54b	99	86.909	ENSSMAG00000018659	rad54b	99	85.381	Scophthalmus_maximus
ENSATEG00000001527	rad54b	97	89.139	ENSSDUG00000001122	rad54b	96	86.980	Seriola_dumerili
ENSATEG00000001527	rad54b	100	89.049	ENSSLDG00000013787	rad54b	100	86.970	Seriola_lalandi_dorsalis
ENSATEG00000001527	rad54b	99	57.430	ENSSPUG00000016497	-	99	57.430	Sphenodon_punctatus
ENSATEG00000001527	rad54b	100	84.677	ENSSPAG00000012800	rad54b	100	84.677	Stegastes_partitus
ENSATEG00000001527	rad54b	99	54.878	ENSSSCG00000006101	-	98	59.142	Sus_scrofa
ENSATEG00000001527	rad54b	99	56.338	ENSTGUG00000011880	-	99	56.338	Taeniopygia_guttata
ENSATEG00000001527	rad54b	100	79.936	ENSTRUG00000010015	rad54b	99	79.936	Takifugu_rubripes
ENSATEG00000001527	rad54b	99	50.493	ENSTTRG00000006312	-	99	50.493	Tursiops_truncatus
ENSATEG00000001527	rad54b	99	54.208	ENSUMAG00000016401	-	99	54.208	Ursus_maritimus
ENSATEG00000001527	rad54b	99	53.241	ENSVPAG00000003157	-	87	59.874	Vicugna_pacos
ENSATEG00000001527	rad54b	99	49.390	ENSXETG00000025924	rad54b	99	52.736	Xenopus_tropicalis
ENSATEG00000001527	rad54b	99	81.178	ENSXMAG00000013141	rad54b	99	81.178	Xiphophorus_maculatus