EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000001894 (Gene tree)
Gene ID: 113157308
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 10098 bases
Position: chrOOHO01000015.1:16427916-16438013
Accession: 113157308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000002634	KH_1	PF00013.29	3.9e-06	1	1
ENSATEP00000002634	zf-CCHC	PF00098.23	0.00054	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000002660	-	3586	-	ENSATEP00000002634	676 (aa)	XP_026208510	UPI000E464B50

Gene Model

Click here to download ENSATEG00000001894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000001894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000001894	sf1	97	93.646	ENSAPOG00000012341	sf1	67	92.105	Acanthochromis_polyacanthus
ENSATEG00000001894	sf1	97	94.091	ENSAOCG00000010934	sf1	67	92.325	Amphiprion_ocellaris
ENSATEG00000001894	sf1	97	94.091	ENSAPEG00000009498	sf1	67	92.325	Amphiprion_percula
ENSATEG00000001894	sf1	84	65.733	ENSANAG00000022607	-	88	72.922	Aotus_nancymaae
ENSATEG00000001894	sf1	60	78.436	ENSANAG00000026664	-	89	81.579	Aotus_nancymaae
ENSATEG00000001894	sf1	67	91.189	ENSACLG00000007633	sf1	69	90.508	Astatotilapia_calliptera
ENSATEG00000001894	sf1	69	84.958	ENSAMXG00000003630	sf1	59	84.211	Astyanax_mexicanus
ENSATEG00000001894	sf1	60	77.327	ENSBTAG00000001035	SF1	61	81.579	Bos_taurus
ENSATEG00000001894	sf1	60	77.327	ENSCJAG00000002780	SF1	75	69.455	Callithrix_jacchus
ENSATEG00000001894	sf1	60	77.327	ENSCAFG00000014239	SF1	58	81.579	Canis_familiaris
ENSATEG00000001894	sf1	60	77.327	ENSCAFG00020014381	SF1	58	82.105	Canis_lupus_dingo
ENSATEG00000001894	sf1	60	77.327	ENSCHIG00000025867	SF1	58	82.105	Capra_hircus
ENSATEG00000001894	sf1	59	77.724	ENSCAPG00000010762	SF1	65	82.086	Cavia_aperea
ENSATEG00000001894	sf1	60	77.327	ENSCCAG00000037881	SF1	89	81.579	Cebus_capucinus
ENSATEG00000001894	sf1	60	70.944	ENSCCAG00000023781	-	82	71.579	Cebus_capucinus
ENSATEG00000001894	sf1	60	77.327	ENSCATG00000011564	SF1	89	81.579	Cercocebus_atys
ENSATEG00000001894	sf1	57	72.362	ENSCHOG00000006008	SF1	78	67.442	Choloepus_hoffmanni
ENSATEG00000001894	sf1	63	81.713	ENSCPBG00000023763	SF1	68	66.353	Chrysemys_picta_bellii
ENSATEG00000001894	sf1	60	57.007	ENSCING00000005564	-	85	57.541	Ciona_intestinalis
ENSATEG00000001894	sf1	51	55.914	ENSCSAVG00000009055	-	64	64.706	Ciona_savignyi
ENSATEG00000001894	sf1	60	77.327	ENSCANG00000042201	SF1	89	81.579	Colobus_angolensis_palliatus
ENSATEG00000001894	sf1	60	77.488	ENSCGRG00001003677	Sf1	65	82.105	Cricetulus_griseus_chok1gshd
ENSATEG00000001894	sf1	59	78.125	ENSCGRG00000001708	Sf1	68	81.316	Cricetulus_griseus_crigri
ENSATEG00000001894	sf1	97	90.498	ENSCSEG00000014375	sf1	65	90.153	Cynoglossus_semilaevis
ENSATEG00000001894	sf1	98	89.458	ENSCVAG00000001670	sf1	67	89.474	Cyprinodon_variegatus
ENSATEG00000001894	sf1	85	83.042	ENSDARG00000008188	sf1	65	91.081	Danio_rerio
ENSATEG00000001894	sf1	60	77.327	ENSDORG00000016334	Sf1	58	82.105	Dipodomys_ordii
ENSATEG00000001894	sf1	86	48.649	ENSEBUG00000012728	sf1	61	55.699	Eptatretus_burgeri
ENSATEG00000001894	sf1	53	78.075	ENSEEUG00000001058	SF1	83	82.335	Erinaceus_europaeus
ENSATEG00000001894	sf1	78	79.330	ENSELUG00000013225	sf1	60	84.783	Esox_lucius
ENSATEG00000001894	sf1	60	77.327	ENSFCAG00000012231	SF1	75	69.531	Felis_catus
ENSATEG00000001894	sf1	59	77.724	ENSFDAG00000009833	SF1	65	82.086	Fukomys_damarensis
ENSATEG00000001894	sf1	97	88.333	ENSFHEG00000022656	sf1	67	89.912	Fundulus_heteroclitus
ENSATEG00000001894	sf1	71	78.468	ENSGMOG00000007469	sf1	61	93.713	Gadus_morhua
ENSATEG00000001894	sf1	89	88.962	ENSGAFG00000019284	sf1	74	89.035	Gambusia_affinis
ENSATEG00000001894	sf1	63	81.481	ENSGAGG00000021691	SF1	68	71.811	Gopherus_agassizii
ENSATEG00000001894	sf1	67	91.685	ENSHBUG00000011598	sf1	67	91.009	Haplochromis_burtoni
ENSATEG00000001894	sf1	60	77.327	ENSHGLG00000009541	SF1	65	81.579	Heterocephalus_glaber_female
ENSATEG00000001894	sf1	55	71.007	ENSHGLG00100008255	-	70	77.208	Heterocephalus_glaber_male
ENSATEG00000001894	sf1	59	77.724	ENSHGLG00100013879	-	65	82.086	Heterocephalus_glaber_male
ENSATEG00000001894	sf1	69	86.141	ENSHCOG00000011388	sf1	67	86.534	Hippocampus_comes
ENSATEG00000001894	sf1	54	71.618	ENSSTOG00000024353	-	66	72.032	Ictidomys_tridecemlineatus
ENSATEG00000001894	sf1	59	77.724	ENSSTOG00000009790	-	58	82.620	Ictidomys_tridecemlineatus
ENSATEG00000001894	sf1	60	77.566	ENSJJAG00000011788	Sf1	58	82.368	Jaculus_jaculus
ENSATEG00000001894	sf1	84	91.419	ENSKMAG00000005854	sf1	70	89.497	Kryptolebias_marmoratus
ENSATEG00000001894	sf1	97	79.186	ENSLBEG00000019836	sf1	72	90.196	Labrus_bergylta
ENSATEG00000001894	sf1	60	78.102	ENSLACG00000018493	SF1	67	79.412	Latimeria_chalumnae
ENSATEG00000001894	sf1	67	80.000	ENSLOCG00000002130	sf1	66	81.489	Lepisosteus_oculatus
ENSATEG00000001894	sf1	60	78.795	ENSLAFG00000007201	SF1	63	82.759	Loxodonta_africana
ENSATEG00000001894	sf1	60	77.327	ENSMFAG00000033122	SF1	89	81.579	Macaca_fascicularis
ENSATEG00000001894	sf1	60	77.327	ENSMMUG00000022606	SF1	90	81.579	Macaca_mulatta
ENSATEG00000001894	sf1	60	77.327	ENSMNEG00000037901	SF1	89	81.579	Macaca_nemestrina
ENSATEG00000001894	sf1	60	77.381	ENSMLEG00000040706	SF1	90	80.779	Mandrillus_leucophaeus
ENSATEG00000001894	sf1	100	93.913	ENSMAMG00000001780	sf1	100	93.913	Mastacembelus_armatus
ENSATEG00000001894	sf1	67	91.685	ENSMZEG00005009196	sf1	67	91.009	Maylandia_zebra
ENSATEG00000001894	sf1	60	77.488	ENSMAUG00000014064	Sf1	65	82.105	Mesocricetus_auratus
ENSATEG00000001894	sf1	60	77.327	ENSMICG00000001202	SF1	89	81.365	Microcebus_murinus
ENSATEG00000001894	sf1	60	77.566	ENSMOCG00000022038	Sf1	65	82.105	Microtus_ochrogaster
ENSATEG00000001894	sf1	86	89.119	ENSMMOG00000020474	sf1	84	91.519	Mola_mola
ENSATEG00000001894	sf1	60	77.857	ENSMODG00000029407	SF1	80	81.842	Monodelphis_domestica
ENSATEG00000001894	sf1	84	86.926	ENSMALG00000020521	sf1	92	89.223	Monopterus_albus
ENSATEG00000001894	sf1	60	77.488	MGP_CAROLIEiJ_G0022607	Sf1	99	95.113	Mus_caroli
ENSATEG00000001894	sf1	60	77.488	ENSMUSG00000024949	Sf1	99	95.113	Mus_musculus
ENSATEG00000001894	sf1	60	77.488	MGP_PahariEiJ_G0014101	Sf1	99	95.113	Mus_pahari
ENSATEG00000001894	sf1	60	77.488	MGP_SPRETEiJ_G0023518	Sf1	99	95.113	Mus_spretus
ENSATEG00000001894	sf1	60	77.327	ENSMPUG00000012684	SF1	58	82.105	Mustela_putorius_furo
ENSATEG00000001894	sf1	60	77.327	ENSMLUG00000015217	-	58	82.105	Myotis_lucifugus
ENSATEG00000001894	sf1	63	74.434	ENSMLUG00000029800	-	64	77.895	Myotis_lucifugus
ENSATEG00000001894	sf1	60	77.566	ENSNGAG00000005550	Sf1	65	81.842	Nannospalax_galili
ENSATEG00000001894	sf1	60	77.488	ENSNLEG00000005236	-	89	81.579	Nomascus_leucogenys
ENSATEG00000001894	sf1	58	78.293	ENSMEUG00000013424	SF1	68	82.480	Notamacropus_eugenii
ENSATEG00000001894	sf1	67	91.247	ENSONIG00000015728	sf1	67	90.570	Oreochromis_niloticus
ENSATEG00000001894	sf1	60	77.327	ENSOCUG00000026486	SF1	59	82.105	Oryctolagus_cuniculus
ENSATEG00000001894	sf1	69	86.596	ENSORLG00000011853	sf1	66	87.692	Oryzias_latipes
ENSATEG00000001894	sf1	69	86.864	ENSORLG00020011834	sf1	66	87.719	Oryzias_latipes_hni
ENSATEG00000001894	sf1	68	86.900	ENSORLG00015012855	sf1	66	87.473	Oryzias_latipes_hsok
ENSATEG00000001894	sf1	97	89.666	ENSOMEG00000005210	sf1	67	89.035	Oryzias_melastigma
ENSATEG00000001894	sf1	60	77.327	ENSOGAG00000016196	SF1	58	82.105	Otolemur_garnettii
ENSATEG00000001894	sf1	60	77.327	ENSOARG00000009166	SF1	65	81.579	Ovis_aries
ENSATEG00000001894	sf1	60	78.810	ENSPPAG00000002799	-	90	81.579	Pan_paniscus
ENSATEG00000001894	sf1	59	77.724	ENSPPRG00000013566	SF1	57	84.211	Panthera_pardus
ENSATEG00000001894	sf1	60	77.327	ENSPTIG00000016141	SF1	67	81.579	Panthera_tigris_altaica
ENSATEG00000001894	sf1	60	78.810	ENSPTRG00000003846	SF1	89	81.579	Pan_troglodytes
ENSATEG00000001894	sf1	60	77.327	ENSPANG00000020754	SF1	89	81.579	Papio_anubis
ENSATEG00000001894	sf1	60	77.488	ENSPEMG00000010463	Sf1	65	82.105	Peromyscus_maniculatus_bairdii
ENSATEG00000001894	sf1	60	77.804	ENSPCIG00000018173	SF1	60	82.895	Phascolarctos_cinereus
ENSATEG00000001894	sf1	97	89.848	ENSPFOG00000013683	sf1	67	89.254	Poecilia_formosa
ENSATEG00000001894	sf1	90	89.739	ENSPLAG00000018076	sf1	61	90.099	Poecilia_latipinna
ENSATEG00000001894	sf1	97	89.848	ENSPMEG00000005726	sf1	67	89.254	Poecilia_mexicana
ENSATEG00000001894	sf1	97	89.545	ENSPREG00000004155	sf1	67	88.596	Poecilia_reticulata
ENSATEG00000001894	sf1	60	77.327	ENSPPYG00000003098	-	70	81.579	Pongo_abelii
ENSATEG00000001894	sf1	60	77.069	ENSPCAG00000013631	SF1	75	69.396	Procavia_capensis
ENSATEG00000001894	sf1	60	77.327	ENSPCOG00000027546	SF1	89	81.365	Propithecus_coquereli
ENSATEG00000001894	sf1	67	91.466	ENSPNYG00000004673	sf1	67	90.789	Pundamilia_nyererei
ENSATEG00000001894	sf1	67	83.983	ENSPNAG00000013072	sf1	67	83.224	Pygocentrus_nattereri
ENSATEG00000001894	sf1	60	77.488	ENSRNOG00000021085	Sf1	58	82.105	Rattus_norvegicus
ENSATEG00000001894	sf1	60	77.327	ENSRBIG00000042818	SF1	89	81.579	Rhinopithecus_bieti
ENSATEG00000001894	sf1	60	76.887	ENSRROG00000045655	SF1	91	80.779	Rhinopithecus_roxellana
ENSATEG00000001894	sf1	81	66.381	ENSSBOG00000022267	-	84	72.934	Saimiri_boliviensis_boliviensis
ENSATEG00000001894	sf1	71	71.281	ENSSHAG00000006841	SF1	68	83.646	Sarcophilus_harrisii
ENSATEG00000001894	sf1	71	80.873	ENSSFOG00015021978	sf1	66	80.349	Scleropages_formosus
ENSATEG00000001894	sf1	84	89.501	ENSSMAG00000007549	sf1	70	91.048	Scophthalmus_maximus
ENSATEG00000001894	sf1	94	94.844	ENSSDUG00000003903	sf1	98	94.844	Seriola_dumerili
ENSATEG00000001894	sf1	59	73.366	ENSSARG00000008180	SF1	71	77.273	Sorex_araneus
ENSATEG00000001894	sf1	59	79.535	ENSSPUG00000012907	SF1	58	85.915	Sphenodon_punctatus
ENSATEG00000001894	sf1	97	94.394	ENSSPAG00000019060	sf1	67	92.763	Stegastes_partitus
ENSATEG00000001894	sf1	60	77.327	ENSSSCG00000013021	SF1	58	82.632	Sus_scrofa
ENSATEG00000001894	sf1	72	71.698	ENSTNIG00000004820	sf1	72	75.835	Tetraodon_nigroviridis
ENSATEG00000001894	sf1	59	72.525	ENSTBEG00000013133	SF1	55	74.211	Tupaia_belangeri
ENSATEG00000001894	sf1	60	79.369	ENSUMAG00000007268	SF1	71	81.579	Ursus_maritimus
ENSATEG00000001894	sf1	85	73.559	ENSXETG00000008434	sf1	60	87.429	Xenopus_tropicalis
ENSATEG00000001894	sf1	71	89.293	ENSXCOG00000003704	sf1	68	93.113	Xiphophorus_couchianus
ENSATEG00000001894	sf1	97	90.455	ENSXMAG00000007822	sf1	70	89.693	Xiphophorus_maculatus