EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000001904 (Gene tree)
Gene ID: 113157623
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 6155 bases
Position: chrOOHO01000015.1:16438722-16444876
Accession: 113157623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000002648	zf-CCHC	PF00098.23	4.3e-08	1	1
ENSATEP00000002648	RRM_5	PF13893.6	1.4e-07	1	1
ENSATEP00000002648	RRM_1	PF00076.22	2.6e-31	1	2
ENSATEP00000002648	RRM_1	PF00076.22	2.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000002674	-	2667	-	ENSATEP00000002648	421 (aa)	XP_026208999	UPI000E45794E

Gene Model

Click here to download ENSATEG00000001904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000001904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000001904	rbm4.1	64	55.921	ENSATEG00000019395	rbm4.3	99	56.209
ENSATEG00000001904	rbm4.1	64	56.000	ENSATEG00000019375	rbm4.3	97	39.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000001904	rbm4.1	100	91.686	ENSAPOG00000012353	rbm4.1	100	91.686	Acanthochromis_polyacanthus
ENSATEG00000001904	rbm4.1	100	91.211	ENSACIG00000016482	rbm4.1	100	91.211	Amphilophus_citrinellus
ENSATEG00000001904	rbm4.1	100	92.637	ENSAOCG00000010915	rbm4.1	100	92.637	Amphiprion_ocellaris
ENSATEG00000001904	rbm4.1	100	92.637	ENSAPEG00000009494	rbm4.1	100	92.637	Amphiprion_percula
ENSATEG00000001904	rbm4.1	99	46.062	ENSACLG00000007740	-	99	44.471	Astatotilapia_calliptera
ENSATEG00000001904	rbm4.1	100	90.736	ENSACLG00000007722	rbm4.1	100	90.736	Astatotilapia_calliptera
ENSATEG00000001904	rbm4.1	96	50.120	ENSCSEG00000014359	-	97	49.048	Cynoglossus_semilaevis
ENSATEG00000001904	rbm4.1	100	75.059	ENSCSEG00000014365	rbm4.1	100	75.059	Cynoglossus_semilaevis
ENSATEG00000001904	rbm4.1	100	79.810	ENSCVAG00000019349	rbm4.1	100	79.810	Cyprinodon_variegatus
ENSATEG00000001904	rbm4.1	100	69.176	ENSDARG00000036386	rbm4.1	100	68.706	Danio_rerio
ENSATEG00000001904	rbm4.1	100	67.681	ENSELUG00000013205	rbm4.1	100	65.826	Esox_lucius
ENSATEG00000001904	rbm4.1	100	78.199	ENSFHEG00000022926	rbm4.1	100	77.725	Fundulus_heteroclitus
ENSATEG00000001904	rbm4.1	92	52.152	ENSGMOG00000007455	-	92	52.369	Gadus_morhua
ENSATEG00000001904	rbm4.1	100	67.606	ENSGMOG00000007464	rbm4.1	100	69.340	Gadus_morhua
ENSATEG00000001904	rbm4.1	100	79.669	ENSGAFG00000019302	rbm4.1	100	78.960	Gambusia_affinis
ENSATEG00000001904	rbm4.1	97	49.758	ENSGACG00000000821	-	97	47.754	Gasterosteus_aculeatus
ENSATEG00000001904	rbm4.1	100	80.095	ENSGACG00000000822	rbm4.1	100	91.667	Gasterosteus_aculeatus
ENSATEG00000001904	rbm4.1	100	90.736	ENSHBUG00000011610	rbm4.1	100	90.736	Haplochromis_burtoni
ENSATEG00000001904	rbm4.1	92	73.077	ENSHCOG00000011403	rbm4.1	95	72.564	Hippocampus_comes
ENSATEG00000001904	rbm4.1	100	64.384	ENSIPUG00000022931	rbm4.1	100	65.455	Ictalurus_punctatus
ENSATEG00000001904	rbm4.1	100	50.353	ENSIPUG00000022937	rbm4.2	100	49.769	Ictalurus_punctatus
ENSATEG00000001904	rbm4.1	100	78.014	ENSKMAG00000006556	rbm4.1	100	77.778	Kryptolebias_marmoratus
ENSATEG00000001904	rbm4.1	98	50.239	ENSLBEG00000019756	-	90	60.256	Labrus_bergylta
ENSATEG00000001904	rbm4.1	100	85.748	ENSLBEG00000019782	rbm4.1	100	85.748	Labrus_bergylta
ENSATEG00000001904	rbm4.1	100	95.012	ENSMAMG00000001765	rbm4.1	100	95.012	Mastacembelus_armatus
ENSATEG00000001904	rbm4.1	98	52.153	ENSMAMG00000001760	-	98	49.528	Mastacembelus_armatus
ENSATEG00000001904	rbm4.1	100	90.736	ENSMZEG00005009205	rbm4.1	100	90.736	Maylandia_zebra
ENSATEG00000001904	rbm4.1	100	87.707	ENSMMOG00000020479	rbm4.1	100	87.707	Mola_mola
ENSATEG00000001904	rbm4.1	98	51.807	ENSMALG00000020557	-	98	49.644	Monopterus_albus
ENSATEG00000001904	rbm4.1	100	91.211	ENSMALG00000020544	rbm4.1	100	91.211	Monopterus_albus
ENSATEG00000001904	rbm4.1	100	90.974	ENSNBRG00000017755	rbm4.1	100	90.974	Neolamprologus_brichardi
ENSATEG00000001904	rbm4.1	100	91.211	ENSONIG00000015730	rbm4.1	100	91.211	Oreochromis_niloticus
ENSATEG00000001904	rbm4.1	100	78.147	ENSORLG00000012496	rbm4.1	100	78.147	Oryzias_latipes
ENSATEG00000001904	rbm4.1	100	78.147	ENSORLG00020012454	rbm4.1	100	78.147	Oryzias_latipes_hni
ENSATEG00000001904	rbm4.1	100	78.385	ENSORLG00015013678	rbm4.1	100	78.385	Oryzias_latipes_hsok
ENSATEG00000001904	rbm4.1	100	79.097	ENSOMEG00000001001	rbm4.1	100	79.097	Oryzias_melastigma
ENSATEG00000001904	rbm4.1	100	64.252	ENSPKIG00000020805	rbm4.1	85	81.159	Paramormyrops_kingsleyae
ENSATEG00000001904	rbm4.1	100	79.433	ENSPFOG00000012675	rbm4.1	100	78.723	Poecilia_formosa
ENSATEG00000001904	rbm4.1	99	47.129	ENSPFOG00000012685	-	99	46.136	Poecilia_formosa
ENSATEG00000001904	rbm4.1	100	79.433	ENSPLAG00000018572	rbm4.1	100	78.723	Poecilia_latipinna
ENSATEG00000001904	rbm4.1	100	79.433	ENSPMEG00000006290	rbm4.1	100	78.723	Poecilia_mexicana
ENSATEG00000001904	rbm4.1	99	45.735	ENSPREG00000003764	-	88	64.706	Poecilia_reticulata
ENSATEG00000001904	rbm4.1	100	79.433	ENSPREG00000003724	rbm4.1	100	78.723	Poecilia_reticulata
ENSATEG00000001904	rbm4.1	100	90.736	ENSPNYG00000004662	rbm4.1	100	90.736	Pundamilia_nyererei
ENSATEG00000001904	rbm4.1	100	68.000	ENSPNAG00000002539	rbm4.1	100	68.618	Pygocentrus_nattereri
ENSATEG00000001904	rbm4.1	100	52.436	ENSPNAG00000013057	rbm4.2	100	51.508	Pygocentrus_nattereri
ENSATEG00000001904	rbm4.1	100	64.252	ENSSFOG00015021996	sf1	100	63.785	Scleropages_formosus
ENSATEG00000001904	rbm4.1	100	87.886	ENSSMAG00000007571	rbm4.1	100	85.748	Scophthalmus_maximus
ENSATEG00000001904	rbm4.1	100	94.774	ENSSDUG00000003925	rbm4.1	100	94.774	Seriola_dumerili
ENSATEG00000001904	rbm4.1	97	52.745	ENSSDUG00000003936	-	99	49.765	Seriola_dumerili
ENSATEG00000001904	rbm4.1	100	94.774	ENSSLDG00000013147	rbm4.1	100	94.774	Seriola_lalandi_dorsalis
ENSATEG00000001904	rbm4.1	97	50.358	ENSSLDG00000013157	-	99	50.117	Seriola_lalandi_dorsalis
ENSATEG00000001904	rbm4.1	100	92.180	ENSSPAG00000019053	rbm4.1	100	94.076	Stegastes_partitus
ENSATEG00000001904	rbm4.1	99	48.571	ENSSPAG00000019046	-	99	46.279	Stegastes_partitus
ENSATEG00000001904	rbm4.1	99	46.905	ENSTRUG00000013328	-	99	45.708	Takifugu_rubripes
ENSATEG00000001904	rbm4.1	100	80.048	ENSTRUG00000013334	rbm4.1	100	79.097	Takifugu_rubripes
ENSATEG00000001904	rbm4.1	82	82.096	ENSTNIG00000004821	rbm4.1	97	92.821	Tetraodon_nigroviridis
ENSATEG00000001904	rbm4.1	97	47.087	ENSTNIG00000000316	-	97	47.031	Tetraodon_nigroviridis
ENSATEG00000001904	rbm4.1	100	78.960	ENSXCOG00000003731	rbm4.1	100	78.251	Xiphophorus_couchianus
ENSATEG00000001904	rbm4.1	100	79.196	ENSXMAG00000008069	rbm4.1	100	78.487	Xiphophorus_maculatus
ENSATEG00000001904	rbm4.1	99	48.104	ENSXMAG00000008059	-	87	66.310	Xiphophorus_maculatus