EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSATEG00000001937 (Gene tree)
Gene ID
113162653
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Anabas_testudineus
Status
putative
Strand
Minus strand
Length
11807 bases
Position
chrOOHO01000019.1:9139891-9151697
Accession
113162653
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSATEP00000002711MMR_HSR1PF01926.230.0001411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSATET00000002760-534-ENSATEP00000002732177 (aa)--
ENSATET00000002739-2771-ENSATEP00000002711218 (aa)XP_026216699UPI000E45EBEE
Gene Model
Click here to download ENSATEG00000001937's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000001937's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSATEG00000001937rab5c7942.697ENSATEG00000002860RAB7A9939.320
ENSATEG00000001937rab5c7934.021ENSATEG00000022993-7734.595
ENSATEG00000001937rab5c5431.148ENSATEG00000021432arl8a6631.061
ENSATEG00000001937rab5c7249.045ENSATEG00000006156rab11al7349.045
ENSATEG00000001937rab5c8236.066ENSATEG00000017702rab33a8036.066
ENSATEG00000001937rab5c8936.364ENSATEG00000012781-7341.358
ENSATEG00000001937rab5c7437.195ENSATEG00000013086-7737.195
ENSATEG00000001937rab5c10084.862ENSATEG00000014748rab5aa10083.945
ENSATEG00000001937rab5c9050.000ENSATEG00000025079rab22a8453.988
ENSATEG00000001937rab5c7731.579ENSATEG00000023047rab34a6331.579
ENSATEG00000001937rab5c7330.435ENSATEG00000008400rras8130.435
ENSATEG00000001937rab5c7744.910ENSATEG00000010475rab308244.910
ENSATEG00000001937rab5c5431.148ENSATEG00000024817arl8ba6231.148
ENSATEG00000001937rab5c8043.678ENSATEG00000015992rab418243.678
ENSATEG00000001937rab5c9041.117ENSATEG00000006124rab25b9541.117
ENSATEG00000001937rab5c7942.697ENSATEG00000017237RAB7A9939.320
ENSATEG00000001937rab5c8943.367ENSATEG00000002479rab1ba8147.239
ENSATEG00000001937rab5c8337.368ENSATEG00000016312rab33ba7537.569
ENSATEG00000001937rab5c7448.447ENSATEG00000023730rab11ba7448.447
ENSATEG00000001937rab5c7740.719ENSATEG00000019238si:dkey-16l2.169636.318
ENSATEG00000001937rab5c8742.328ENSATEG00000012604-8742.328
ENSATEG00000001937rab5c7737.791ENSATEG00000019683rab127137.791
ENSATEG00000001937rab5c8944.615ENSATEG00000015844-8147.853
ENSATEG00000001937rab5c7438.415ENSATEG00000009865RAB39B7738.415
ENSATEG00000001937rab5c8943.216ENSATEG00000014851rab25a8047.929
ENSATEG00000001937rab5c7237.576ENSATEG00000014958si:dkey-13a21.47937.576
ENSATEG00000001937rab5c7434.337ENSATEG00000018261RAB9A7634.337
ENSATEG00000001937rab5c7436.585ENSATEG00000009052rab42a7536.585
ENSATEG00000001937rab5c8241.573ENSATEG00000002553rab2a8144.099
ENSATEG00000001937rab5c6733.784ENSATEG00000004893si:cabz01085950.17233.784
ENSATEG00000001937rab5c7431.737ENSATEG00000024739RAB298131.737
ENSATEG00000001937rab5c9032.589ENSATEG00000010784si:dkey-34d22.56435.542
ENSATEG00000001937rab5c8942.647ENSATEG00000023725-7547.853
ENSATEG00000001937rab5c8936.923ENSATEG00000013281rab35b9636.923
ENSATEG00000001937rab5c9041.748ENSATEG00000022531rab11a9442.233
ENSATEG00000001937rab5c7844.944ENSATEG00000002952rab18b8046.061
ENSATEG00000001937rab5c7730.178ENSATEG00000007298rras28330.178
ENSATEG00000001937rab5c8940.000ENSATEG00000023662-8343.030
ENSATEG00000001937rab5c8342.051ENSATEG00000021911rab18a8044.242
ENSATEG00000001937rab5c7639.181ENSATEG00000007761zgc:1015597339.181
ENSATEG00000001937rab5c7437.195ENSATEG00000001111rabl27137.195
ENSATEG00000001937rab5c7944.253ENSATEG00000003430zgc:1719277645.399
ENSATEG00000001937rab5c5532.258ENSATEG00000009204arl8bb6332.258
ENSATEG00000001937rab5c7440.373ENSATEG00000019023rab157640.373
ENSATEG00000001937rab5c9042.718ENSATEG00000017696rab11bb7547.853
ENSATEG00000001937rab5c9233.173ENSATEG00000004488rab9b9532.692
ENSATEG00000001937rab5c6236.296ENSATEG00000011117rab205136.296
ENSATEG00000001937rab5c9141.414ENSATEG00000018600rab149241.414
ENSATEG00000001937rab5c7542.945ENSATEG00000011879rab6bb8042.262
ENSATEG00000001937rab5c7731.579ENSATEG00000017315-9230.588
ENSATEG00000001937rab5c7631.737ENSATEG00000020001hrasb8731.737
ENSATEG00000001937rab5c7234.177ENSATEG00000020913rab237436.184
ENSATEG00000001937rab5c7744.910ENSATEG00000012459-8044.910
ENSATEG00000001937rab5c7734.286ENSATEG00000013396rab9a8534.286
ENSATEG00000001937rab5c7633.133ENSATEG00000021300kras9032.164
ENSATEG00000001937rab5c7033.117ENSATEG00000020171rheb8333.117
ENSATEG00000001937rab5c7232.298ENSATEG00000006851rab34b6532.298
ENSATEG00000001937rab5c8945.918ENSATEG00000008052rab1ab8048.466
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSATEG00000001937rab5c10090.826ENSG00000108774RAB5C10095.968Homo_sapiens
ENSATEG00000001937rab5c9997.235ENSAPOG00000016864rab5c9997.235Acanthochromis_polyacanthus
ENSATEG00000001937rab5c10090.826ENSAMEG00000006003RAB5C10089.908Ailuropoda_melanoleuca
ENSATEG00000001937rab5c9997.696ENSACIG00000010896rab5c9997.696Amphilophus_citrinellus
ENSATEG00000001937rab5c9997.235ENSAOCG00000016614rab5c9997.235Amphiprion_ocellaris
ENSATEG00000001937rab5c9797.170ENSAPEG00000017868-9797.170Amphiprion_percula
ENSATEG00000001937rab5c9493.171ENSANAG00000025390RAB5C10091.707Aotus_nancymaae
ENSATEG00000001937rab5c9996.774ENSACLG00000002706rab5c9996.774Astatotilapia_calliptera
ENSATEG00000001937rab5c9690.476ENSACLG00000008615-9989.091Astatotilapia_calliptera
ENSATEG00000001937rab5c9997.706ENSAMXG00000043717rab5c9997.706Astyanax_mexicanus
ENSATEG00000001937rab5c9592.308ENSAMXG00000037267-9991.866Astyanax_mexicanus
ENSATEG00000001937rab5c10090.826ENSBTAG00000006982RAB5C10089.450Bos_taurus
ENSATEG00000001937rab5c9975.115WBGene00004268rab-59975.115Caenorhabditis_elegans
ENSATEG00000001937rab5c10090.826ENSCAFG00000015629RAB5C10089.908Canis_familiaris
ENSATEG00000001937rab5c10090.826ENSCAFG00020013537RAB5C10089.908Canis_lupus_dingo
ENSATEG00000001937rab5c10090.826ENSCHIG00000012960RAB5C10089.450Capra_hircus
ENSATEG00000001937rab5c10091.284ENSTSYG00000030531RAB5C10089.908Carlito_syrichta
ENSATEG00000001937rab5c10090.826ENSCCAG00000025940RAB5C10089.450Cebus_capucinus
ENSATEG00000001937rab5c10090.826ENSCATG00000040873RAB5C10089.450Cercocebus_atys
ENSATEG00000001937rab5c10090.367ENSCLAG00000016650RAB5C10088.991Chinchilla_lanigera
ENSATEG00000001937rab5c8295.506ENSCHOG00000009886RAB5C10095.506Choloepus_hoffmanni
ENSATEG00000001937rab5c10074.886ENSCING00000003340-9974.312Ciona_intestinalis
ENSATEG00000001937rab5c10075.771ENSCSAVG00000000613-9984.568Ciona_savignyi
ENSATEG00000001937rab5c10090.826ENSCGRG00001014226Rab5c10088.991Cricetulus_griseus_chok1gshd
ENSATEG00000001937rab5c10090.826ENSCGRG00000007534Rab5c10088.991Cricetulus_griseus_crigri
ENSATEG00000001937rab5c9996.313ENSCSEG00000017024rab5c9996.313Cynoglossus_semilaevis
ENSATEG00000001937rab5c9996.774ENSCVAG00000009550rab5c9996.774Cyprinodon_variegatus
ENSATEG00000001937rab5c10090.826ENSDNOG00000038853RAB5C10088.991Dasypus_novemcinctus
ENSATEG00000001937rab5c10091.743ENSDORG00000006819Rab5c10090.367Dipodomys_ordii
ENSATEG00000001937rab5c8581.081FBgn0014010Rab58481.081Drosophila_melanogaster
ENSATEG00000001937rab5c8586.559ENSEBUG00000014794rab5c8886.559Eptatretus_burgeri
ENSATEG00000001937rab5c10090.826ENSEASG00005009281RAB5C10089.908Equus_asinus_asinus
ENSATEG00000001937rab5c10091.284ENSECAG00000025054RAB5C10089.908Equus_caballus
ENSATEG00000001937rab5c10090.826ENSEEUG00000002790RAB5C10089.450Erinaceus_europaeus
ENSATEG00000001937rab5c9990.783ENSELUG00000010439-9990.783Esox_lucius
ENSATEG00000001937rab5c9995.370ENSELUG00000018516rab5c9995.370Esox_lucius
ENSATEG00000001937rab5c10090.826ENSFCAG00000002148RAB5C10089.450Felis_catus
ENSATEG00000001937rab5c10089.450ENSFDAG00000021541RAB5C10088.532Fukomys_damarensis
ENSATEG00000001937rab5c9991.284ENSFHEG00000015268-9991.284Fundulus_heteroclitus
ENSATEG00000001937rab5c9998.157ENSFHEG00000012117rab5c9998.157Fundulus_heteroclitus
ENSATEG00000001937rab5c7788.690ENSGMOG00000001876-9788.690Gadus_morhua
ENSATEG00000001937rab5c9996.774ENSGMOG00000015096rab5c9996.774Gadus_morhua
ENSATEG00000001937rab5c9997.235ENSGAFG00000000884rab5c9997.235Gambusia_affinis
ENSATEG00000001937rab5c9591.388ENSGAFG00000003642-9988.288Gambusia_affinis
ENSATEG00000001937rab5c9993.088ENSGACG00000008659rab5c9993.088Gasterosteus_aculeatus
ENSATEG00000001937rab5c10090.826ENSGGOG00000005472RAB5C10089.450Gorilla_gorilla
ENSATEG00000001937rab5c9996.774ENSHBUG00000002014rab5c9996.774Haplochromis_burtoni
ENSATEG00000001937rab5c9690.476ENSHBUG00000006823-9989.091Haplochromis_burtoni
ENSATEG00000001937rab5c10089.450ENSHGLG00000012067RAB5C10088.073Heterocephalus_glaber_female
ENSATEG00000001937rab5c9998.165ENSHCOG00000004662rab5c9798.165Hippocampus_comes
ENSATEG00000001937rab5c9780.660ENSHCOG00000020238-10080.090Hippocampus_comes
ENSATEG00000001937rab5c9296.500ENSIPUG00000020082rab5c9994.521Ictalurus_punctatus
ENSATEG00000001937rab5c10090.367ENSSTOG00000006620RAB5C10089.450Ictidomys_tridecemlineatus
ENSATEG00000001937rab5c10091.284ENSJJAG00000021181Rab5c10089.450Jaculus_jaculus
ENSATEG00000001937rab5c9998.618ENSKMAG00000020038rab5c9998.618Kryptolebias_marmoratus
ENSATEG00000001937rab5c9991.284ENSKMAG00000017417-9991.284Kryptolebias_marmoratus
ENSATEG00000001937rab5c10091.324ENSLBEG00000010408-9892.166Labrus_bergylta
ENSATEG00000001937rab5c9998.157ENSLBEG00000004128rab5c9998.157Labrus_bergylta
ENSATEG00000001937rab5c9993.056ENSLOCG00000012566rab5c10092.130Lepisosteus_oculatus
ENSATEG00000001937rab5c10090.826ENSMFAG00000039627RAB5C10089.450Macaca_fascicularis
ENSATEG00000001937rab5c10090.826ENSMNEG00000000355RAB5C10089.450Macaca_nemestrina
ENSATEG00000001937rab5c9997.696ENSMAMG00000022322rab5c9997.696Mastacembelus_armatus
ENSATEG00000001937rab5c9992.202ENSMAMG00000016207-9992.202Mastacembelus_armatus
ENSATEG00000001937rab5c9996.774ENSMZEG00005022735rab5c9996.774Maylandia_zebra
ENSATEG00000001937rab5c9690.476ENSMZEG00005021090-9989.091Maylandia_zebra
ENSATEG00000001937rab5c10091.284ENSMAUG00000015005Rab5c10089.908Mesocricetus_auratus
ENSATEG00000001937rab5c10091.284ENSMICG00000041608RAB5C10089.908Microcebus_murinus
ENSATEG00000001937rab5c10091.284ENSMOCG00000018531-10089.450Microtus_ochrogaster
ENSATEG00000001937rab5c10097.248ENSMMOG00000020621rab5c9997.248Mola_mola
ENSATEG00000001937rab5c9791.509ENSMALG00000006052rab5c9691.667Monopterus_albus
ENSATEG00000001937rab5c9988.940ENSMALG00000022348-9988.940Monopterus_albus
ENSATEG00000001937rab5c10091.284MGP_CAROLIEiJ_G0017184Rab5c10089.908Mus_caroli
ENSATEG00000001937rab5c10091.284ENSMUSG00000019173Rab5c10089.908Mus_musculus
ENSATEG00000001937rab5c10091.284MGP_PahariEiJ_G0018314Rab5c10089.908Mus_pahari
ENSATEG00000001937rab5c10091.284MGP_SPRETEiJ_G0018027Rab5c10089.908Mus_spretus
ENSATEG00000001937rab5c10090.826ENSMPUG00000010554RAB5C10089.908Mustela_putorius_furo
ENSATEG00000001937rab5c10090.826ENSNGAG00000010286Rab5c10089.450Nannospalax_galili
ENSATEG00000001937rab5c9690.476ENSNBRG00000016922-9989.091Neolamprologus_brichardi
ENSATEG00000001937rab5c9997.696ENSNBRG00000018165rab5c9997.696Neolamprologus_brichardi
ENSATEG00000001937rab5c8288.764ENSOPRG00000008255RAB5C10088.764Ochotona_princeps
ENSATEG00000001937rab5c10089.908ENSODEG00000017920RAB5C10088.532Octodon_degus
ENSATEG00000001937rab5c9997.235ENSONIG00000001113rab5c9997.235Oreochromis_niloticus
ENSATEG00000001937rab5c10098.624ENSORLG00000003882rab5c10098.624Oryzias_latipes
ENSATEG00000001937rab5c10098.165ENSORLG00020008388rab5c10098.165Oryzias_latipes_hni
ENSATEG00000001937rab5c10098.624ENSORLG00015021900rab5c10098.624Oryzias_latipes_hsok
ENSATEG00000001937rab5c10098.624ENSOMEG00000023078rab5c10098.624Oryzias_melastigma
ENSATEG00000001937rab5c10091.284ENSOGAG00000009456RAB5C10089.908Otolemur_garnettii
ENSATEG00000001937rab5c10090.826ENSOARG00000018768RAB5C10089.450Ovis_aries
ENSATEG00000001937rab5c10090.826ENSPPAG00000037206RAB5C10089.450Pan_paniscus
ENSATEG00000001937rab5c10090.826ENSPPRG00000005745RAB5C10089.450Panthera_pardus
ENSATEG00000001937rab5c10090.826ENSPTIG00000008177RAB5C10089.450Panthera_tigris_altaica
ENSATEG00000001937rab5c10090.826ENSPTRG00000009194RAB5C10089.450Pan_troglodytes
ENSATEG00000001937rab5c9989.352ENSPKIG00000001237-9987.963Paramormyrops_kingsleyae
ENSATEG00000001937rab5c9989.352ENSPKIG00000020112-9989.352Paramormyrops_kingsleyae
ENSATEG00000001937rab5c9993.088ENSPMGG00000010792rab5c9894.811Periophthalmus_magnuspinnatus
ENSATEG00000001937rab5c10091.284ENSPEMG00000017971Rab5c10089.450Peromyscus_maniculatus_bairdii
ENSATEG00000001937rab5c9976.852ENSPMAG00000001399rab5c9976.852Petromyzon_marinus
ENSATEG00000001937rab5c9978.733ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSATEG00000001937rab5c10074.771ENSPMAG00000007867rab5c8983.511Petromyzon_marinus
ENSATEG00000001937rab5c10090.826ENSPCIG00000020225-10089.450Phascolarctos_cinereus
ENSATEG00000001937rab5c9990.367ENSPLAG00000016333-10090.367Poecilia_latipinna
ENSATEG00000001937rab5c9997.235ENSPLAG00000004790rab5c9997.235Poecilia_latipinna
ENSATEG00000001937rab5c9791.549ENSPMEG00000012614-9989.593Poecilia_mexicana
ENSATEG00000001937rab5c9997.235ENSPMEG00000011336rab5c9997.235Poecilia_mexicana
ENSATEG00000001937rab5c8692.063ENSPREG00000022167-8993.443Poecilia_reticulata
ENSATEG00000001937rab5c9997.235ENSPREG00000010146rab5c9997.235Poecilia_reticulata
ENSATEG00000001937rab5c10090.826ENSPPYG00000008398RAB5C10089.450Pongo_abelii
ENSATEG00000001937rab5c10089.908ENSPCAG00000016412RAB5C10088.532Procavia_capensis
ENSATEG00000001937rab5c10090.367ENSPCOG00000026327RAB5C10089.450Propithecus_coquereli
ENSATEG00000001937rab5c10091.284ENSPVAG00000003867RAB5C10089.908Pteropus_vampyrus
ENSATEG00000001937rab5c9996.774ENSPNYG00000010615rab5c9996.774Pundamilia_nyererei
ENSATEG00000001937rab5c9690.476ENSPNYG00000015851-9989.091Pundamilia_nyererei
ENSATEG00000001937rab5c9996.789ENSPNAG00000028138rab5c9996.789Pygocentrus_nattereri
ENSATEG00000001937rab5c9690.000ENSPNAG00000002218-9989.573Pygocentrus_nattereri
ENSATEG00000001937rab5c10091.284ENSRNOG00000018568Rab5c10089.908Rattus_norvegicus
ENSATEG00000001937rab5c10090.826ENSRBIG00000031376RAB5C10089.450Rhinopithecus_bieti
ENSATEG00000001937rab5c10090.826ENSRROG00000032895RAB5C10089.450Rhinopithecus_roxellana
ENSATEG00000001937rab5c10090.826ENSSBOG00000032552-10089.450Saimiri_boliviensis_boliviensis
ENSATEG00000001937rab5c10091.284ENSSHAG00000005267-10089.908Sarcophilus_harrisii
ENSATEG00000001937rab5c9987.963ENSSFOG00015009988-9887.963Scleropages_formosus
ENSATEG00000001937rab5c9996.313ENSSMAG00000007323rab5c9996.313Scophthalmus_maximus
ENSATEG00000001937rab5c9997.235ENSSDUG00000023008rab5c9997.235Seriola_dumerili
ENSATEG00000001937rab5c9996.313ENSSLDG00000017771rab5c9996.313Seriola_lalandi_dorsalis
ENSATEG00000001937rab5c10090.826ENSSPUG00000012950-10089.908Sphenodon_punctatus
ENSATEG00000001937rab5c9998.618ENSSPAG00000006436rab5c9998.618Stegastes_partitus
ENSATEG00000001937rab5c10090.826ENSSSCG00000032467RAB5C10089.450Sus_scrofa
ENSATEG00000001937rab5c9996.774ENSTRUG00000015590rab5c9996.774Takifugu_rubripes
ENSATEG00000001937rab5c9698.095ENSTNIG00000011711rab5c9598.095Tetraodon_nigroviridis
ENSATEG00000001937rab5c10090.826ENSTBEG00000007092RAB5C10089.450Tupaia_belangeri
ENSATEG00000001937rab5c10090.826ENSTTRG00000006673RAB5C10088.991Tursiops_truncatus
ENSATEG00000001937rab5c10090.826ENSUAMG00000024343RAB5C10089.908Ursus_americanus
ENSATEG00000001937rab5c10090.826ENSUMAG00000023270RAB5C10089.908Ursus_maritimus
ENSATEG00000001937rab5c9997.235ENSXCOG00000016788rab5c9997.235Xiphophorus_couchianus
ENSATEG00000001937rab5c9591.866ENSXCOG00000006300-9988.739Xiphophorus_couchianus
ENSATEG00000001937rab5c9990.323ENSXMAG00000022179-9990.323Xiphophorus_maculatus
ENSATEG00000001937rab5c9997.235ENSXMAG00000003266rab5c9997.235Xiphophorus_maculatus

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