EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000002182 (Gene tree)
Gene ID: -
Gene Symbol: smn1
Alias: fa12d01|smn|wu:fa12d01
Full Name: survival of motor neuron 1%2C telomeric
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 6419 bases
Position: chrOOHO01000012.1:9271999-9278417
Accession: ZDB-GENE-990715-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000003045	SMN	PF06003.12	1.3e-106	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000003074	-	3746	-	ENSATEP00000003045	328 (aa)	-	-

Gene Model

Click here to download ENSATEG00000002182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000002182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000002182	smn1	83	53.710	ENSG00000205571	SMN2	92	53.506	Homo_sapiens
ENSATEG00000002182	smn1	83	53.710	ENSG00000172062	SMN1	92	53.506	Homo_sapiens
ENSATEG00000002182	smn1	82	83.704	ENSAPOG00000011324	smn1	95	85.556	Acanthochromis_polyacanthus
ENSATEG00000002182	smn1	83	53.381	ENSAMEG00000003316	-	88	53.237	Ailuropoda_melanoleuca
ENSATEG00000002182	smn1	52	81.765	ENSACIG00000007598	smn1	94	81.765	Amphilophus_citrinellus
ENSATEG00000002182	smn1	80	79.545	ENSACIG00000019772	-	99	79.545	Amphilophus_citrinellus
ENSATEG00000002182	smn1	82	84.074	ENSAOCG00000024444	smn1	95	85.926	Amphiprion_ocellaris
ENSATEG00000002182	smn1	82	84.815	ENSAPEG00000016504	smn1	95	86.667	Amphiprion_percula
ENSATEG00000002182	smn1	58	43.350	ENSAPLG00000010912	-	93	48.744	Anas_platyrhynchos
ENSATEG00000002182	smn1	81	53.309	ENSACAG00000010017	-	91	52.347	Anolis_carolinensis
ENSATEG00000002182	smn1	83	52.113	ENSANAG00000032133	-	89	50.373	Aotus_nancymaae
ENSATEG00000002182	smn1	84	82.971	ENSACLG00000007308	smn1	94	82.971	Astatotilapia_calliptera
ENSATEG00000002182	smn1	82	59.259	ENSAMXG00000013884	smn1	95	65.314	Astyanax_mexicanus
ENSATEG00000002182	smn1	92	49.675	ENSBTAG00000005743	SMN2	91	52.190	Bos_taurus
ENSATEG00000002182	smn1	83	52.297	ENSCJAG00000016290	-	89	50.370	Callithrix_jacchus
ENSATEG00000002182	smn1	79	53.585	ENSCAFG00000007812	SMN	90	52.593	Canis_familiaris
ENSATEG00000002182	smn1	90	49.505	ENSCAFG00020019229	-	93	48.701	Canis_lupus_dingo
ENSATEG00000002182	smn1	80	53.532	ENSCHIG00000015559	-	89	53.571	Capra_hircus
ENSATEG00000002182	smn1	79	55.597	ENSTSYG00000012058	-	90	55.019	Carlito_syrichta
ENSATEG00000002182	smn1	67	44.444	ENSCAPG00000011021	-	53	55.085	Cavia_aperea
ENSATEG00000002182	smn1	79	52.830	ENSCPOG00000036973	-	89	53.903	Cavia_porcellus
ENSATEG00000002182	smn1	81	52.128	ENSCPOG00000012328	-	92	53.497	Cavia_porcellus
ENSATEG00000002182	smn1	83	47.636	ENSCCAG00000018127	-	88	50.558	Cebus_capucinus
ENSATEG00000002182	smn1	79	54.982	ENSCATG00000037002	-	92	53.875	Cercocebus_atys
ENSATEG00000002182	smn1	79	53.903	ENSCLAG00000000284	-	89	54.945	Chinchilla_lanigera
ENSATEG00000002182	smn1	79	54.924	ENSCSAG00000015688	-	88	54.244	Chlorocebus_sabaeus
ENSATEG00000002182	smn1	81	48.944	ENSCPBG00000010968	-	94	48.496	Chrysemys_picta_bellii
ENSATEG00000002182	smn1	79	52.768	ENSCANG00000033324	-	88	52.727	Colobus_angolensis_palliatus
ENSATEG00000002182	smn1	79	55.303	ENSCANG00000038242	-	93	54.647	Colobus_angolensis_palliatus
ENSATEG00000002182	smn1	79	40.684	ENSCGRG00001016998	-	87	41.445	Cricetulus_griseus_chok1gshd
ENSATEG00000002182	smn1	79	54.198	ENSCGRG00001017959	-	90	53.731	Cricetulus_griseus_chok1gshd
ENSATEG00000002182	smn1	79	54.198	ENSCGRG00000007698	Smn1	90	53.731	Cricetulus_griseus_crigri
ENSATEG00000002182	smn1	82	68.214	ENSCSEG00000015227	smn1	98	68.571	Cynoglossus_semilaevis
ENSATEG00000002182	smn1	82	81.111	ENSCVAG00000007498	smn1	95	81.111	Cyprinodon_variegatus
ENSATEG00000002182	smn1	82	63.004	ENSDARG00000018494	smn1	95	61.172	Danio_rerio
ENSATEG00000002182	smn1	71	44.255	ENSDNOG00000045949	-	63	57.616	Dasypus_novemcinctus
ENSATEG00000002182	smn1	69	49.573	ENSDNOG00000007283	-	95	47.917	Dasypus_novemcinctus
ENSATEG00000002182	smn1	80	45.660	ENSDORG00000007082	Smn1	92	45.185	Dipodomys_ordii
ENSATEG00000002182	smn1	51	47.059	ENSETEG00000001406	-	76	49.682	Echinops_telfairi
ENSATEG00000002182	smn1	81	37.884	ENSEBUG00000011902	smn1	51	82.609	Eptatretus_burgeri
ENSATEG00000002182	smn1	76	47.287	ENSEASG00005018000	-	89	48.462	Equus_asinus_asinus
ENSATEG00000002182	smn1	79	52.060	ENSECAG00000015215	-	90	53.160	Equus_caballus
ENSATEG00000002182	smn1	76	52.874	ENSEEUG00000015777	-	100	48.106	Erinaceus_europaeus
ENSATEG00000002182	smn1	82	67.407	ENSELUG00000018067	smn1	95	66.667	Esox_lucius
ENSATEG00000002182	smn1	79	54.444	ENSFCAG00000028292	SMN	90	53.875	Felis_catus
ENSATEG00000002182	smn1	78	56.489	ENSFALG00000012320	-	90	55.344	Ficedula_albicollis
ENSATEG00000002182	smn1	79	49.817	ENSFDAG00000017683	-	89	51.460	Fukomys_damarensis
ENSATEG00000002182	smn1	80	81.749	ENSFHEG00000018508	smn1	95	81.749	Fundulus_heteroclitus
ENSATEG00000002182	smn1	82	65.926	ENSGMOG00000017279	smn1	93	65.926	Gadus_morhua
ENSATEG00000002182	smn1	80	56.134	ENSGALG00000002430	SMN	93	54.380	Gallus_gallus
ENSATEG00000002182	smn1	82	82.593	ENSGAFG00000009501	smn1	95	82.593	Gambusia_affinis
ENSATEG00000002182	smn1	82	81.481	ENSGACG00000010584	smn1	92	79.630	Gasterosteus_aculeatus
ENSATEG00000002182	smn1	58	37.056	ENSGAGG00000013639	-	92	36.620	Gopherus_agassizii
ENSATEG00000002182	smn1	81	51.282	ENSGAGG00000011374	-	93	50.179	Gopherus_agassizii
ENSATEG00000002182	smn1	83	50.362	ENSGGOG00000003872	-	93	50.379	Gorilla_gorilla
ENSATEG00000002182	smn1	82	84.074	ENSHBUG00000013987	smn1	95	84.074	Haplochromis_burtoni
ENSATEG00000002182	smn1	79	52.809	ENSHGLG00000001018	-	89	52.206	Heterocephalus_glaber_female
ENSATEG00000002182	smn1	80	48.699	ENSHGLG00000001905	-	90	50.558	Heterocephalus_glaber_female
ENSATEG00000002182	smn1	79	52.809	ENSHGLG00100011252	-	89	52.206	Heterocephalus_glaber_male
ENSATEG00000002182	smn1	79	49.057	ENSHGLG00100018676	-	94	50.558	Heterocephalus_glaber_male
ENSATEG00000002182	smn1	90	70.608	ENSHCOG00000017136	smn1	99	70.608	Hippocampus_comes
ENSATEG00000002182	smn1	82	64.103	ENSIPUG00000012580	smn1	84	63.736	Ictalurus_punctatus
ENSATEG00000002182	smn1	79	53.640	ENSSTOG00000012288	-	93	52.963	Ictidomys_tridecemlineatus
ENSATEG00000002182	smn1	82	81.319	ENSKMAG00000007239	smn1	95	81.319	Kryptolebias_marmoratus
ENSATEG00000002182	smn1	82	83.333	ENSLBEG00000022550	smn1	95	83.333	Labrus_bergylta
ENSATEG00000002182	smn1	81	33.101	ENSLACG00000009808	-	89	35.401	Latimeria_chalumnae
ENSATEG00000002182	smn1	82	52.982	ENSLOCG00000011339	smn1	95	59.273	Lepisosteus_oculatus
ENSATEG00000002182	smn1	79	52.273	ENSLAFG00000003425	-	86	52.747	Loxodonta_africana
ENSATEG00000002182	smn1	79	55.303	ENSMFAG00000031523	SMN1	92	54.613	Macaca_fascicularis
ENSATEG00000002182	smn1	79	49.430	ENSMFAG00000008812	-	88	50.368	Macaca_fascicularis
ENSATEG00000002182	smn1	79	55.303	ENSMMUG00000020214	SMN1	92	54.613	Macaca_mulatta
ENSATEG00000002182	smn1	79	48.669	ENSMMUG00000030594	-	88	49.632	Macaca_mulatta
ENSATEG00000002182	smn1	64	38.967	ENSMNEG00000036423	-	82	41.071	Macaca_nemestrina
ENSATEG00000002182	smn1	81	53.875	ENSMNEG00000035094	-	92	54.613	Macaca_nemestrina
ENSATEG00000002182	smn1	79	55.720	ENSMLEG00000041902	-	93	54.613	Mandrillus_leucophaeus
ENSATEG00000002182	smn1	87	83.099	ENSMAMG00000011034	smn1	95	85.185	Mastacembelus_armatus
ENSATEG00000002182	smn1	82	84.074	ENSMZEG00005013634	smn1	95	84.074	Maylandia_zebra
ENSATEG00000002182	smn1	58	51.795	ENSMGAG00000008889	-	91	48.718	Meleagris_gallopavo
ENSATEG00000002182	smn1	79	53.008	ENSMAUG00000010262	Smn1	90	53.358	Mesocricetus_auratus
ENSATEG00000002182	smn1	71	47.034	ENSMICG00000034708	-	71	62.658	Microcebus_murinus
ENSATEG00000002182	smn1	79	55.133	ENSMOCG00000017833	Smn1	90	53.731	Microtus_ochrogaster
ENSATEG00000002182	smn1	84	72.000	ENSMMOG00000005504	smn1	99	67.014	Mola_mola
ENSATEG00000002182	smn1	80	53.704	ENSMODG00000001436	-	90	50.923	Monodelphis_domestica
ENSATEG00000002182	smn1	82	85.556	ENSMALG00000008025	smn1	95	85.556	Monopterus_albus
ENSATEG00000002182	smn1	79	54.580	MGP_CAROLIEiJ_G0018836	Smn1	90	53.788	Mus_caroli
ENSATEG00000002182	smn1	79	54.198	ENSMUSG00000021645	Smn1	90	52.788	Mus_musculus
ENSATEG00000002182	smn1	79	54.580	MGP_PahariEiJ_G0015911	Smn1	90	55.133	Mus_pahari
ENSATEG00000002182	smn1	79	52.788	MGP_SPRETEiJ_G0019718	Smn1	90	52.788	Mus_spretus
ENSATEG00000002182	smn1	79	54.717	ENSMPUG00000014470	-	93	54.380	Mustela_putorius_furo
ENSATEG00000002182	smn1	83	52.465	ENSMLUG00000010603	-	87	51.971	Myotis_lucifugus
ENSATEG00000002182	smn1	79	52.416	ENSNGAG00000019833	Smn1	90	52.768	Nannospalax_galili
ENSATEG00000002182	smn1	82	85.556	ENSNBRG00000023000	smn1	95	85.556	Neolamprologus_brichardi
ENSATEG00000002182	smn1	81	53.957	ENSNLEG00000004454	-	92	53.875	Nomascus_leucogenys
ENSATEG00000002182	smn1	58	48.768	ENSMEUG00000011393	-	100	49.367	Notamacropus_eugenii
ENSATEG00000002182	smn1	76	52.713	ENSOPRG00000002015	-	100	53.435	Ochotona_princeps
ENSATEG00000002182	smn1	80	53.160	ENSODEG00000015976	-	92	55.351	Octodon_degus
ENSATEG00000002182	smn1	82	84.815	ENSONIG00000011799	smn1	95	84.815	Oreochromis_niloticus
ENSATEG00000002182	smn1	80	46.763	ENSOANG00000001626	-	93	48.188	Ornithorhynchus_anatinus
ENSATEG00000002182	smn1	79	42.545	ENSOCUG00000025183	-	89	43.369	Oryctolagus_cuniculus
ENSATEG00000002182	smn1	79	49.110	ENSOCUG00000026649	-	89	50.182	Oryctolagus_cuniculus
ENSATEG00000002182	smn1	79	49.638	ENSOCUG00000017097	-	88	50.929	Oryctolagus_cuniculus
ENSATEG00000002182	smn1	82	78.519	ENSORLG00000010552	smn1	95	78.519	Oryzias_latipes
ENSATEG00000002182	smn1	82	73.432	ENSORLG00020007936	smn1	95	71.956	Oryzias_latipes_hni
ENSATEG00000002182	smn1	82	77.778	ENSORLG00015022425	smn1	95	77.778	Oryzias_latipes_hsok
ENSATEG00000002182	smn1	82	80.000	ENSOMEG00000007824	smn1	95	80.000	Oryzias_melastigma
ENSATEG00000002182	smn1	79	47.273	ENSOGAG00000031414	-	92	48.889	Otolemur_garnettii
ENSATEG00000002182	smn1	80	52.045	ENSOARG00000005425	-	95	52.190	Ovis_aries
ENSATEG00000002182	smn1	83	53.710	ENSPPAG00000036640	-	92	53.506	Pan_paniscus
ENSATEG00000002182	smn1	79	54.275	ENSPPRG00000005575	-	90	53.875	Panthera_pardus
ENSATEG00000002182	smn1	79	54.982	ENSPTIG00000007745	-	90	53.676	Panthera_tigris_altaica
ENSATEG00000002182	smn1	83	53.147	ENSPTRG00000016955	-	92	54.104	Pan_troglodytes
ENSATEG00000002182	smn1	80	49.438	ENSPANG00000000253	-	89	50.916	Papio_anubis
ENSATEG00000002182	smn1	79	55.303	ENSPANG00000013601	-	89	54.412	Papio_anubis
ENSATEG00000002182	smn1	82	60.294	ENSPKIG00000011096	smn1	95	59.926	Paramormyrops_kingsleyae
ENSATEG00000002182	smn1	78	49.624	ENSPSIG00000014787	-	81	48.315	Pelodiscus_sinensis
ENSATEG00000002182	smn1	83	77.091	ENSPMGG00000012285	smn1	99	74.113	Periophthalmus_magnuspinnatus
ENSATEG00000002182	smn1	77	40.385	ENSPMAG00000005004	smn1	88	39.015	Petromyzon_marinus
ENSATEG00000002182	smn1	80	54.444	ENSPCIG00000025764	-	92	51.661	Phascolarctos_cinereus
ENSATEG00000002182	smn1	82	82.593	ENSPFOG00000007786	smn1	95	82.593	Poecilia_formosa
ENSATEG00000002182	smn1	82	82.963	ENSPLAG00000012071	smn1	95	82.963	Poecilia_latipinna
ENSATEG00000002182	smn1	82	82.593	ENSPMEG00000017085	smn1	95	82.593	Poecilia_mexicana
ENSATEG00000002182	smn1	82	82.222	ENSPREG00000005824	smn1	95	82.222	Poecilia_reticulata
ENSATEG00000002182	smn1	77	53.030	ENSPPYG00000015533	-	92	51.894	Pongo_abelii
ENSATEG00000002182	smn1	78	50.579	ENSPCAG00000004187	-	96	51.351	Procavia_capensis
ENSATEG00000002182	smn1	54	53.846	ENSPCOG00000022307	-	65	61.806	Propithecus_coquereli
ENSATEG00000002182	smn1	83	53.261	ENSPVAG00000005977	-	90	53.597	Pteropus_vampyrus
ENSATEG00000002182	smn1	82	85.556	ENSPNYG00000014148	smn1	95	85.556	Pundamilia_nyererei
ENSATEG00000002182	smn1	82	63.736	ENSPNAG00000014007	smn1	83	65.441	Pygocentrus_nattereri
ENSATEG00000002182	smn1	79	53.817	ENSRNOG00000018067	Smn1	89	52.612	Rattus_norvegicus
ENSATEG00000002182	smn1	79	49.810	ENSRBIG00000036775	-	88	49.442	Rhinopithecus_bieti
ENSATEG00000002182	smn1	79	54.924	ENSRBIG00000037052	-	89	54.044	Rhinopithecus_bieti
ENSATEG00000002182	smn1	79	54.924	ENSRROG00000039399	-	92	54.244	Rhinopithecus_roxellana
ENSATEG00000002182	smn1	80	50.943	ENSRROG00000031088	-	91	50.189	Rhinopithecus_roxellana
ENSATEG00000002182	smn1	83	54.480	ENSSBOG00000011665	-	88	51.493	Saimiri_boliviensis_boliviensis
ENSATEG00000002182	smn1	80	54.074	ENSSHAG00000001499	-	96	48.708	Sarcophilus_harrisii
ENSATEG00000002182	smn1	82	60.650	ENSSFOG00015015507	smn1	95	61.011	Scleropages_formosus
ENSATEG00000002182	smn1	82	78.148	ENSSMAG00000007922	smn1	95	80.741	Scophthalmus_maximus
ENSATEG00000002182	smn1	82	89.259	ENSSDUG00000018533	smn1	95	89.259	Seriola_dumerili
ENSATEG00000002182	smn1	82	89.630	ENSSLDG00000021135	smn1	95	89.630	Seriola_lalandi_dorsalis
ENSATEG00000002182	smn1	81	55.474	ENSSPUG00000000373	-	93	51.246	Sphenodon_punctatus
ENSATEG00000002182	smn1	82	87.037	ENSSPAG00000004345	smn1	95	87.407	Stegastes_partitus
ENSATEG00000002182	smn1	79	53.409	ENSSSCG00000016970	-	90	53.405	Sus_scrofa
ENSATEG00000002182	smn1	81	51.237	ENSTGUG00000001548	-	97	48.571	Taeniopygia_guttata
ENSATEG00000002182	smn1	81	66.917	ENSTRUG00000000736	smn	94	71.053	Takifugu_rubripes
ENSATEG00000002182	smn1	81	67.766	ENSTNIG00000009892	smn1	94	70.330	Tetraodon_nigroviridis
ENSATEG00000002182	smn1	83	54.448	ENSUMAG00000007842	-	68	53.957	Ursus_maritimus
ENSATEG00000002182	smn1	52	77.778	ENSVPAG00000009887	-	93	50.566	Vicugna_pacos
ENSATEG00000002182	smn1	80	53.160	ENSVVUG00000006934	-	90	52.593	Vulpes_vulpes
ENSATEG00000002182	smn1	80	55.147	ENSXETG00000018189	smn2	90	51.449	Xenopus_tropicalis
ENSATEG00000002182	smn1	76	32.046	ENSXETG00000004912	-	79	63.793	Xenopus_tropicalis
ENSATEG00000002182	smn1	82	81.852	ENSXMAG00000001521	smn1	95	81.852	Xiphophorus_maculatus