EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000002196 (Gene tree)
Gene ID: 113171821
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 8090 bases
Position: chrOOHO01000003.1:286160-294249
Accession: 113171821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000003060	RRM_1	PF00076.22	2.3e-30	1	2
ENSATEP00000003060	RRM_1	PF00076.22	2.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000003089	-	2137	-	ENSATEP00000003060	340 (aa)	XP_026230334	UPI000E457F12

Gene Model

Click here to download ENSATEG00000002196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000002196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000002196	trnau1apb	96	43.363	ENSATEG00000012140	trnau1apa	94	40.462
ENSATEG00000002196	trnau1apb	50	32.847	ENSATEG00000014593	-	65	32.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000002196	trnau1apb	100	78.529	ENSAPOG00000010086	trnau1apb	100	80.294	Acanthochromis_polyacanthus
ENSATEG00000002196	trnau1apb	100	85.000	ENSACIG00000001863	trnau1apb	100	82.991	Amphilophus_citrinellus
ENSATEG00000002196	trnau1apb	100	93.235	ENSAOCG00000011891	trnau1apb	100	93.235	Amphiprion_ocellaris
ENSATEG00000002196	trnau1apb	100	84.706	ENSAPEG00000008029	trnau1apb	100	92.059	Amphiprion_percula
ENSATEG00000002196	trnau1apb	100	83.965	ENSACLG00000003016	trnau1apb	100	81.977	Astatotilapia_calliptera
ENSATEG00000002196	trnau1apb	99	66.077	ENSAMXG00000001805	trnau1apb	99	65.680	Astyanax_mexicanus
ENSATEG00000002196	trnau1apb	99	85.882	ENSCSEG00000018215	trnau1apb	99	85.882	Cynoglossus_semilaevis
ENSATEG00000002196	trnau1apb	95	81.515	ENSCVAG00000017866	trnau1apb	100	82.424	Cyprinodon_variegatus
ENSATEG00000002196	trnau1apb	100	64.035	ENSDARG00000056475	trnau1apb	98	65.385	Danio_rerio
ENSATEG00000002196	trnau1apb	100	64.327	ENSELUG00000016683	trnau1apb	99	66.667	Esox_lucius
ENSATEG00000002196	trnau1apb	100	84.682	ENSFHEG00000001267	trnau1apb	100	84.242	Fundulus_heteroclitus
ENSATEG00000002196	trnau1apb	100	71.751	ENSGMOG00000001160	trnau1apb	100	75.660	Gadus_morhua
ENSATEG00000002196	trnau1apb	52	95.480	ENSGAFG00000006770	trnau1apb	100	74.344	Gambusia_affinis
ENSATEG00000002196	trnau1apb	100	82.647	ENSGACG00000014944	trnau1apb	100	83.529	Gasterosteus_aculeatus
ENSATEG00000002196	trnau1apb	71	38.934	ENSGAGG00000022384	-	78	39.754	Gopherus_agassizii
ENSATEG00000002196	trnau1apb	100	91.176	ENSHBUG00000018944	trnau1apb	99	90.294	Haplochromis_burtoni
ENSATEG00000002196	trnau1apb	68	83.478	ENSHCOG00000011350	trnau1apb	78	80.816	Hippocampus_comes
ENSATEG00000002196	trnau1apb	99	64.223	ENSIPUG00000008843	tsp1l	99	65.976	Ictalurus_punctatus
ENSATEG00000002196	trnau1apb	64	90.411	ENSKMAG00000010082	trnau1apb	99	85.714	Kryptolebias_marmoratus
ENSATEG00000002196	trnau1apb	100	90.000	ENSLBEG00000020480	trnau1apb	100	89.706	Labrus_bergylta
ENSATEG00000002196	trnau1apb	100	53.623	ENSLOCG00000013175	trnau1apb	99	54.227	Lepisosteus_oculatus
ENSATEG00000002196	trnau1apb	100	92.647	ENSMAMG00000012192	trnau1apb	100	92.647	Mastacembelus_armatus
ENSATEG00000002196	trnau1apb	100	91.176	ENSMZEG00005014852	trnau1apb	99	90.294	Maylandia_zebra
ENSATEG00000002196	trnau1apb	71	38.525	ENSMGAG00000003234	-	98	39.184	Meleagris_gallopavo
ENSATEG00000002196	trnau1apb	97	78.551	ENSMMOG00000021521	trnau1apb	100	77.681	Mola_mola
ENSATEG00000002196	trnau1apb	99	77.219	ENSMALG00000003772	trnau1apb	100	76.765	Monopterus_albus
ENSATEG00000002196	trnau1apb	97	83.784	ENSNBRG00000000751	trnau1apb	99	81.737	Neolamprologus_brichardi
ENSATEG00000002196	trnau1apb	99	78.635	ENSONIG00000016639	trnau1apb	100	76.331	Oreochromis_niloticus
ENSATEG00000002196	trnau1apb	100	77.326	ENSORLG00000013265	trnau1apb	99	86.919	Oryzias_latipes
ENSATEG00000002196	trnau1apb	100	87.719	ENSORLG00020004464	trnau1apb	100	87.117	Oryzias_latipes_hni
ENSATEG00000002196	trnau1apb	100	88.012	ENSORLG00015021098	trnau1apb	99	88.012	Oryzias_latipes_hsok
ENSATEG00000002196	trnau1apb	100	79.360	ENSOMEG00000016531	trnau1apb	99	88.372	Oryzias_melastigma
ENSATEG00000002196	trnau1apb	53	81.967	ENSPKIG00000007995	trnau1apb	99	61.383	Paramormyrops_kingsleyae
ENSATEG00000002196	trnau1apb	71	41.532	ENSPSIG00000004189	-	78	40.400	Pelodiscus_sinensis
ENSATEG00000002196	trnau1apb	79	79.070	ENSPMGG00000018509	trnau1apb	96	79.070	Periophthalmus_magnuspinnatus
ENSATEG00000002196	trnau1apb	100	81.609	ENSPFOG00000003938	trnau1apb	99	83.526	Poecilia_formosa
ENSATEG00000002196	trnau1apb	100	81.609	ENSPLAG00000015480	trnau1apb	99	83.526	Poecilia_latipinna
ENSATEG00000002196	trnau1apb	100	81.609	ENSPMEG00000012743	trnau1apb	99	83.526	Poecilia_mexicana
ENSATEG00000002196	trnau1apb	100	80.172	ENSPREG00000015035	trnau1apb	99	82.081	Poecilia_reticulata
ENSATEG00000002196	trnau1apb	100	81.341	ENSPNYG00000012127	trnau1apb	100	79.360	Pundamilia_nyererei
ENSATEG00000002196	trnau1apb	99	65.982	ENSPNAG00000019138	trnau1apb	98	68.047	Pygocentrus_nattereri
ENSATEG00000002196	trnau1apb	99	61.561	ENSSFOG00015014158	trnau1apb	99	64.723	Scleropages_formosus
ENSATEG00000002196	trnau1apb	99	87.906	ENSSMAG00000001745	trnau1apb	99	87.906	Scophthalmus_maximus
ENSATEG00000002196	trnau1apb	99	93.805	ENSSDUG00000011109	trnau1apb	99	93.805	Seriola_dumerili
ENSATEG00000002196	trnau1apb	99	94.100	ENSSLDG00000012947	trnau1apb	99	94.100	Seriola_lalandi_dorsalis
ENSATEG00000002196	trnau1apb	71	35.659	ENSSPUG00000016701	-	82	35.887	Sphenodon_punctatus
ENSATEG00000002196	trnau1apb	100	93.529	ENSSPAG00000006917	trnau1apb	100	93.529	Stegastes_partitus
ENSATEG00000002196	trnau1apb	100	80.409	ENSTRUG00000008608	trnau1apb	99	79.539	Takifugu_rubripes
ENSATEG00000002196	trnau1apb	99	69.139	ENSTNIG00000000916	trnau1apb	100	65.579	Tetraodon_nigroviridis
ENSATEG00000002196	trnau1apb	94	73.860	ENSXCOG00000007974	trnau1apb	94	75.229	Xiphophorus_couchianus
ENSATEG00000002196	trnau1apb	100	81.897	ENSXMAG00000029918	trnau1apb	99	83.815	Xiphophorus_maculatus