EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000002230 (Gene tree)
Gene ID: 113161317
Gene Symbol: patl1
Alias: fa11d04|wu:fa11d04|zgc:158239
Full Name: PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 13599 bases
Position: chrOOHO01000002.1:25641150-25654748
Accession: 113161317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000003116	PAT1	PF09770.9	8.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000003145	-	2665	XM_026358829	ENSATEP00000003116	816 (aa)	XP_026214614	UPI000E4561A1

Gene Model

Click here to download ENSATEG00000002230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000002230's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000002230	patl1	83	53.409	ENSG00000166889	PATL1	91	63.333	Homo_sapiens
ENSATEG00000002230	patl1	80	65.000	ENSAMEG00000014215	PATL1	91	61.667	Ailuropoda_melanoleuca
ENSATEG00000002230	patl1	99	78.458	ENSACIG00000005182	patl1	96	91.429	Amphilophus_citrinellus
ENSATEG00000002230	patl1	94	83.075	ENSAOCG00000021993	patl1	95	80.695	Amphiprion_ocellaris
ENSATEG00000002230	patl1	56	34.362	ENSAOCG00000023738	patl2	51	35.443	Amphiprion_ocellaris
ENSATEG00000002230	patl1	56	33.958	ENSAPEG00000011299	patl2	61	34.937	Amphiprion_percula
ENSATEG00000002230	patl1	100	84.267	ENSAPEG00000021391	patl1	100	83.890	Amphiprion_percula
ENSATEG00000002230	patl1	60	42.857	ENSAPLG00000013394	PATL1	99	43.646	Anas_platyrhynchos
ENSATEG00000002230	patl1	80	52.326	ENSACAG00000006607	PATL1	89	59.322	Anolis_carolinensis
ENSATEG00000002230	patl1	80	66.667	ENSANAG00000023078	PATL1	91	63.333	Aotus_nancymaae
ENSATEG00000002230	patl1	100	82.754	ENSACLG00000005144	patl1	100	84.910	Astatotilapia_calliptera
ENSATEG00000002230	patl1	52	36.569	ENSAMXG00000020293	patl2	59	36.715	Astyanax_mexicanus
ENSATEG00000002230	patl1	100	72.019	ENSAMXG00000010731	patl1	100	75.211	Astyanax_mexicanus
ENSATEG00000002230	patl1	83	53.933	ENSBTAG00000005913	PATL1	84	78.788	Bos_taurus
ENSATEG00000002230	patl1	83	52.809	ENSCJAG00000016192	PATL1	91	63.333	Callithrix_jacchus
ENSATEG00000002230	patl1	52	36.303	ENSCJAG00000002379	PATL2	73	37.349	Callithrix_jacchus
ENSATEG00000002230	patl1	80	66.667	ENSCAFG00000007581	PATL1	91	63.333	Canis_familiaris
ENSATEG00000002230	patl1	80	66.667	ENSCAFG00020001648	PATL1	86	78.788	Canis_lupus_dingo
ENSATEG00000002230	patl1	83	54.545	ENSCHIG00000025913	PATL1	91	63.333	Capra_hircus
ENSATEG00000002230	patl1	53	36.748	ENSCHIG00000026665	PATL2	73	38.404	Capra_hircus
ENSATEG00000002230	patl1	83	55.682	ENSTSYG00000012748	PATL1	88	63.333	Carlito_syrichta
ENSATEG00000002230	patl1	51	36.343	ENSTSYG00000032456	PATL2	72	37.469	Carlito_syrichta
ENSATEG00000002230	patl1	83	52.809	ENSCAPG00000013668	PATL1	88	81.818	Cavia_aperea
ENSATEG00000002230	patl1	83	55.056	ENSCPOG00000006827	PATL1	92	65.000	Cavia_porcellus
ENSATEG00000002230	patl1	80	66.667	ENSCCAG00000023759	PATL1	91	63.333	Cebus_capucinus
ENSATEG00000002230	patl1	80	66.667	ENSCATG00000009629	PATL1	91	63.333	Cercocebus_atys
ENSATEG00000002230	patl1	82	55.422	ENSCLAG00000003427	PATL1	89	81.818	Chinchilla_lanigera
ENSATEG00000002230	patl1	73	49.541	ENSCSAG00000006095	PATL1	93	50.230	Chlorocebus_sabaeus
ENSATEG00000002230	patl1	60	56.000	ENSCHOG00000001611	PATL1	81	56.000	Choloepus_hoffmanni
ENSATEG00000002230	patl1	52	38.031	ENSCPBG00000006150	PATL2	60	39.206	Chrysemys_picta_bellii
ENSATEG00000002230	patl1	52	32.692	ENSCING00000021535	-	76	32.196	Ciona_intestinalis
ENSATEG00000002230	patl1	80	66.102	ENSCANG00000039197	PATL1	84	78.788	Colobus_angolensis_palliatus
ENSATEG00000002230	patl1	80	66.667	ENSCGRG00001024927	Patl1	91	63.333	Cricetulus_griseus_chok1gshd
ENSATEG00000002230	patl1	79	67.308	ENSCGRG00000000461	Patl1	89	78.788	Cricetulus_griseus_crigri
ENSATEG00000002230	patl1	100	81.699	ENSCSEG00000008261	patl1	100	81.504	Cynoglossus_semilaevis
ENSATEG00000002230	patl1	90	82.125	ENSCVAG00000006664	patl1	100	82.125	Cyprinodon_variegatus
ENSATEG00000002230	patl1	100	72.993	ENSDARG00000017423	patl1	100	71.551	Danio_rerio
ENSATEG00000002230	patl1	69	65.385	ENSDNOG00000038865	PATL1	99	48.991	Dasypus_novemcinctus
ENSATEG00000002230	patl1	80	66.667	ENSDORG00000000237	Patl1	77	78.788	Dipodomys_ordii
ENSATEG00000002230	patl1	52	34.624	ENSEASG00005017984	PATL2	71	35.732	Equus_asinus_asinus
ENSATEG00000002230	patl1	83	54.545	ENSEASG00005007963	PATL1	86	78.788	Equus_asinus_asinus
ENSATEG00000002230	patl1	83	54.545	ENSECAG00000011411	PATL1	86	78.788	Equus_caballus
ENSATEG00000002230	patl1	52	35.227	ENSECAG00000013462	PATL2	72	36.386	Equus_caballus
ENSATEG00000002230	patl1	97	74.906	ENSELUG00000024249	patl1	100	74.275	Esox_lucius
ENSATEG00000002230	patl1	59	34.195	ENSELUG00000023244	patl2	66	33.996	Esox_lucius
ENSATEG00000002230	patl1	83	54.545	ENSFCAG00000015573	PATL1	91	63.333	Felis_catus
ENSATEG00000002230	patl1	52	37.020	ENSFCAG00000027170	PATL2	74	37.838	Felis_catus
ENSATEG00000002230	patl1	59	34.462	ENSFALG00000009768	PATL2	69	34.462	Ficedula_albicollis
ENSATEG00000002230	patl1	83	51.613	ENSFALG00000012150	PATL1	92	56.897	Ficedula_albicollis
ENSATEG00000002230	patl1	82	53.086	ENSFDAG00000016128	PATL1	89	81.818	Fukomys_damarensis
ENSATEG00000002230	patl1	99	80.049	ENSFHEG00000017790	patl1	100	79.927	Fundulus_heteroclitus
ENSATEG00000002230	patl1	50	36.111	ENSGMOG00000005666	patl2	99	37.010	Gadus_morhua
ENSATEG00000002230	patl1	55	36.501	ENSGALG00000002167	PATL2	57	36.933	Gallus_gallus
ENSATEG00000002230	patl1	84	55.056	ENSGALG00000042641	PATL1	94	65.000	Gallus_gallus
ENSATEG00000002230	patl1	100	81.685	ENSGAFG00000006508	patl1	100	79.731	Gambusia_affinis
ENSATEG00000002230	patl1	99	70.107	ENSGACG00000016448	patl1	99	73.397	Gasterosteus_aculeatus
ENSATEG00000002230	patl1	80	65.000	ENSGAGG00000004461	PATL1	92	61.667	Gopherus_agassizii
ENSATEG00000002230	patl1	80	66.667	ENSGGOG00000004335	PATL1	92	63.333	Gorilla_gorilla
ENSATEG00000002230	patl1	100	82.754	ENSHBUG00000005365	patl1	100	84.910	Haplochromis_burtoni
ENSATEG00000002230	patl1	83	55.056	ENSHGLG00000018173	PATL1	91	65.000	Heterocephalus_glaber_female
ENSATEG00000002230	patl1	82	50.000	ENSHGLG00100003453	PATL1	89	72.414	Heterocephalus_glaber_male
ENSATEG00000002230	patl1	100	80.385	ENSHCOG00000001898	patl1	100	79.614	Hippocampus_comes
ENSATEG00000002230	patl1	50	34.824	ENSHCOG00000016754	patl2	56	34.719	Hippocampus_comes
ENSATEG00000002230	patl1	51	36.866	ENSIPUG00000020692	patl2	56	37.500	Ictalurus_punctatus
ENSATEG00000002230	patl1	52	36.036	ENSSTOG00000033848	PATL2	73	37.346	Ictidomys_tridecemlineatus
ENSATEG00000002230	patl1	80	63.158	ENSSTOG00000013764	PATL1	89	78.788	Ictidomys_tridecemlineatus
ENSATEG00000002230	patl1	82	53.750	ENSJJAG00000010135	Patl1	89	81.818	Jaculus_jaculus
ENSATEG00000002230	patl1	100	81.014	ENSKMAG00000020848	patl1	100	81.796	Kryptolebias_marmoratus
ENSATEG00000002230	patl1	54	35.011	ENSKMAG00000021275	patl2	53	35.768	Kryptolebias_marmoratus
ENSATEG00000002230	patl1	100	87.966	ENSLBEG00000023617	patl1	100	88.327	Labrus_bergylta
ENSATEG00000002230	patl1	81	52.280	ENSLACG00000004640	PATL1	87	78.788	Latimeria_chalumnae
ENSATEG00000002230	patl1	76	69.278	ENSLOCG00000000717	patl1	81	69.832	Lepisosteus_oculatus
ENSATEG00000002230	patl1	80	66.667	ENSLAFG00000015161	PATL1	91	63.333	Loxodonta_africana
ENSATEG00000002230	patl1	80	66.667	ENSMFAG00000040851	PATL1	85	78.788	Macaca_fascicularis
ENSATEG00000002230	patl1	80	66.667	ENSMMUG00000017287	PATL1	91	63.333	Macaca_mulatta
ENSATEG00000002230	patl1	80	66.667	ENSMNEG00000038692	PATL1	91	63.333	Macaca_nemestrina
ENSATEG00000002230	patl1	80	66.667	ENSMLEG00000030044	PATL1	91	63.333	Mandrillus_leucophaeus
ENSATEG00000002230	patl1	100	85.921	ENSMAMG00000003950	patl1	100	85.921	Mastacembelus_armatus
ENSATEG00000002230	patl1	100	82.994	ENSMZEG00005013404	patl1	100	84.790	Maylandia_zebra
ENSATEG00000002230	patl1	54	36.761	ENSMGAG00000001309	PATL2	76	36.439	Meleagris_gallopavo
ENSATEG00000002230	patl1	73	64.912	ENSMGAG00000003406	PATL1	88	78.788	Meleagris_gallopavo
ENSATEG00000002230	patl1	74	44.055	ENSMAUG00000012059	Patl1	86	44.992	Mesocricetus_auratus
ENSATEG00000002230	patl1	57	33.267	ENSMAUG00000001008	Patl2	91	33.267	Mesocricetus_auratus
ENSATEG00000002230	patl1	80	66.667	ENSMICG00000004172	PATL1	89	63.333	Microcebus_murinus
ENSATEG00000002230	patl1	80	66.667	ENSMOCG00000010087	Patl1	91	63.333	Microtus_ochrogaster
ENSATEG00000002230	patl1	95	82.783	ENSMMOG00000013711	patl1	84	82.812	Mola_mola
ENSATEG00000002230	patl1	84	53.409	ENSMODG00000020201	PATL1	93	61.667	Monodelphis_domestica
ENSATEG00000002230	patl1	95	75.544	ENSMALG00000018706	patl1	100	76.607	Monopterus_albus
ENSATEG00000002230	patl1	99	44.545	MGP_CAROLIEiJ_G0022739	Patl1	91	63.333	Mus_caroli
ENSATEG00000002230	patl1	83	53.409	ENSMUSG00000046139	Patl1	91	63.333	Mus_musculus
ENSATEG00000002230	patl1	83	53.409	MGP_PahariEiJ_G0014233	Patl1	91	63.333	Mus_pahari
ENSATEG00000002230	patl1	83	53.409	MGP_SPRETEiJ_G0023652	Patl1	91	63.333	Mus_spretus
ENSATEG00000002230	patl1	83	53.409	ENSMPUG00000014607	PATL1	91	63.333	Mustela_putorius_furo
ENSATEG00000002230	patl1	83	53.933	ENSMLUG00000011169	PATL1	91	63.333	Myotis_lucifugus
ENSATEG00000002230	patl1	80	66.667	ENSNGAG00000003682	Patl1	88	78.788	Nannospalax_galili
ENSATEG00000002230	patl1	66	91.515	ENSNBRG00000015372	patl1	93	51.897	Neolamprologus_brichardi
ENSATEG00000002230	patl1	83	53.409	ENSNLEG00000013081	PATL1	92	63.333	Nomascus_leucogenys
ENSATEG00000002230	patl1	58	55.844	ENSMEUG00000009391	PATL1	73	55.844	Notamacropus_eugenii
ENSATEG00000002230	patl1	62	53.266	ENSOPRG00000007963	PATL1	78	53.266	Ochotona_princeps
ENSATEG00000002230	patl1	51	46.117	ENSODEG00000001792	PATL1	79	45.122	Octodon_degus
ENSATEG00000002230	patl1	100	80.838	ENSONIG00000004170	patl1	100	84.772	Oreochromis_niloticus
ENSATEG00000002230	patl1	83	53.933	ENSOCUG00000002156	PATL1	91	63.333	Oryctolagus_cuniculus
ENSATEG00000002230	patl1	53	34.755	ENSOCUG00000006339	PATL2	74	36.776	Oryctolagus_cuniculus
ENSATEG00000002230	patl1	73	80.725	ENSORLG00015022240	patl1	77	82.702	Oryzias_latipes_hsok
ENSATEG00000002230	patl1	80	66.667	ENSOGAG00000004351	PATL1	91	63.333	Otolemur_garnettii
ENSATEG00000002230	patl1	51	35.550	ENSOARG00000003762	PATL2	72	37.056	Ovis_aries
ENSATEG00000002230	patl1	82	53.086	ENSOARG00000012005	PATL1	85	78.788	Ovis_aries
ENSATEG00000002230	patl1	80	66.667	ENSPPAG00000034275	PATL1	91	63.333	Pan_paniscus
ENSATEG00000002230	patl1	52	36.161	ENSPPRG00000004279	PATL2	73	37.346	Panthera_pardus
ENSATEG00000002230	patl1	82	53.750	ENSPPRG00000020639	PATL1	89	78.788	Panthera_pardus
ENSATEG00000002230	patl1	52	36.384	ENSPTIG00000018964	PATL2	74	37.592	Panthera_tigris_altaica
ENSATEG00000002230	patl1	83	54.545	ENSPTIG00000019298	PATL1	91	63.333	Panthera_tigris_altaica
ENSATEG00000002230	patl1	80	66.667	ENSPTRG00000003697	PATL1	92	63.333	Pan_troglodytes
ENSATEG00000002230	patl1	80	66.667	ENSPANG00000035620	PATL1	91	63.333	Papio_anubis
ENSATEG00000002230	patl1	100	73.839	ENSPKIG00000016224	patl1	100	72.960	Paramormyrops_kingsleyae
ENSATEG00000002230	patl1	83	63.333	ENSPSIG00000016206	PATL1	88	60.000	Pelodiscus_sinensis
ENSATEG00000002230	patl1	100	77.952	ENSPMGG00000002644	patl1	100	78.788	Periophthalmus_magnuspinnatus
ENSATEG00000002230	patl1	80	66.667	ENSPEMG00000014215	Patl1	89	78.788	Peromyscus_maniculatus_bairdii
ENSATEG00000002230	patl1	50	36.259	ENSPEMG00000016509	Patl2	67	38.547	Peromyscus_maniculatus_bairdii
ENSATEG00000002230	patl1	84	54.023	ENSPCIG00000010852	PATL1	93	61.667	Phascolarctos_cinereus
ENSATEG00000002230	patl1	100	79.584	ENSPFOG00000007768	patl1	100	79.178	Poecilia_formosa
ENSATEG00000002230	patl1	100	80.923	ENSPLAG00000018465	patl1	100	80.194	Poecilia_latipinna
ENSATEG00000002230	patl1	100	81.553	ENSPMEG00000006555	patl1	100	79.830	Poecilia_mexicana
ENSATEG00000002230	patl1	89	78.862	ENSPREG00000003874	patl1	95	76.965	Poecilia_reticulata
ENSATEG00000002230	patl1	80	66.667	ENSPPYG00000003230	PATL1	91	63.333	Pongo_abelii
ENSATEG00000002230	patl1	52	37.360	ENSPCOG00000000295	PATL2	100	39.837	Propithecus_coquereli
ENSATEG00000002230	patl1	80	66.667	ENSPCOG00000020770	PATL1	91	63.333	Propithecus_coquereli
ENSATEG00000002230	patl1	73	47.699	ENSPVAG00000015239	PATL1	98	47.773	Pteropus_vampyrus
ENSATEG00000002230	patl1	62	94.099	ENSPNYG00000018936	patl1	98	94.118	Pundamilia_nyererei
ENSATEG00000002230	patl1	51	36.585	ENSPNAG00000002315	patl2	57	37.845	Pygocentrus_nattereri
ENSATEG00000002230	patl1	100	74.756	ENSPNAG00000017907	patl1	100	74.607	Pygocentrus_nattereri
ENSATEG00000002230	patl1	83	53.409	ENSRNOG00000021052	Patl1	84	50.230	Rattus_norvegicus
ENSATEG00000002230	patl1	80	66.667	ENSRBIG00000032263	PATL1	92	63.333	Rhinopithecus_bieti
ENSATEG00000002230	patl1	83	52.809	ENSRROG00000032861	PATL1	91	63.333	Rhinopithecus_roxellana
ENSATEG00000002230	patl1	80	66.667	ENSSBOG00000025195	PATL1	91	63.333	Saimiri_boliviensis_boliviensis
ENSATEG00000002230	patl1	84	54.023	ENSSHAG00000004309	PATL1	91	61.667	Sarcophilus_harrisii
ENSATEG00000002230	patl1	100	72.583	ENSSFOG00015009614	patl1	100	73.504	Scleropages_formosus
ENSATEG00000002230	patl1	100	86.811	ENSSMAG00000009482	patl1	100	86.826	Scophthalmus_maximus
ENSATEG00000002230	patl1	100	83.274	ENSSDUG00000005362	patl1	100	84.798	Seriola_dumerili
ENSATEG00000002230	patl1	100	82.901	ENSSLDG00000019146	patl1	100	84.423	Seriola_lalandi_dorsalis
ENSATEG00000002230	patl1	57	49.343	ENSSARG00000009600	PATL1	68	51.238	Sorex_araneus
ENSATEG00000002230	patl1	82	56.322	ENSSPUG00000009453	PATL1	91	65.000	Sphenodon_punctatus
ENSATEG00000002230	patl1	50	34.615	ENSSPAG00000004784	patl2	60	35.190	Stegastes_partitus
ENSATEG00000002230	patl1	65	94.697	ENSSPAG00000003187	patl1	99	80.467	Stegastes_partitus
ENSATEG00000002230	patl1	83	53.933	ENSSSCG00000013124	PATL1	86	78.788	Sus_scrofa
ENSATEG00000002230	patl1	79	63.462	ENSTGUG00000006222	PATL1	91	59.615	Taeniopygia_guttata
ENSATEG00000002230	patl1	100	72.216	ENSTRUG00000000709	patl1	100	71.308	Takifugu_rubripes
ENSATEG00000002230	patl1	70	61.538	ENSTBEG00000000796	PATL1	79	69.697	Tupaia_belangeri
ENSATEG00000002230	patl1	64	54.308	ENSTTRG00000009389	PATL1	81	54.308	Tursiops_truncatus
ENSATEG00000002230	patl1	80	56.250	ENSUMAG00000018634	PATL1	91	81.818	Ursus_maritimus
ENSATEG00000002230	patl1	79	67.308	ENSVVUG00000016668	PATL1	88	78.788	Vulpes_vulpes
ENSATEG00000002230	patl1	69	85.965	ENSXCOG00000010808	patl1	99	86.792	Xiphophorus_couchianus
ENSATEG00000002230	patl1	100	80.900	ENSXMAG00000013834	patl1	100	79.319	Xiphophorus_maculatus