EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000002534 (Gene tree)
Gene ID: 113147725
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 3800 bases
Position: chrOOHO01000007.1:16681676-16685475
Accession: 113147725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000003595	zf-C2H2	PF00096.26	2.1e-25	1	5
ENSATEP00000003595	zf-C2H2	PF00096.26	2.1e-25	2	5
ENSATEP00000003595	zf-C2H2	PF00096.26	2.1e-25	3	5
ENSATEP00000003595	zf-C2H2	PF00096.26	2.1e-25	4	5
ENSATEP00000003595	zf-C2H2	PF00096.26	2.1e-25	5	5
ENSATEP00000003595	zf-met	PF12874.7	2.1e-08	1	2
ENSATEP00000003595	zf-met	PF12874.7	2.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000003626	-	2077	XM_026338902	ENSATEP00000003595	329 (aa)	XP_026194687	UPI000E463CE5

Gene Model

Click here to download ENSATEG00000002534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000002534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000002534	gfi1b	65	41.026	ENSATEG00000011212	-	66	41.026
ENSATEG00000002534	gfi1b	59	43.750	ENSATEG00000006085	-	83	43.750
ENSATEG00000002534	gfi1b	52	42.771	ENSATEG00000011235	-	62	42.771
ENSATEG00000002534	gfi1b	53	41.379	ENSATEG00000009436	-	84	41.379
ENSATEG00000002534	gfi1b	51	45.455	ENSATEG00000022064	-	99	43.478
ENSATEG00000002534	gfi1b	58	40.833	ENSATEG00000008649	-	66	40.367
ENSATEG00000002534	gfi1b	51	45.930	ENSATEG00000002726	-	72	42.331
ENSATEG00000002534	gfi1b	61	43.558	ENSATEG00000007658	-	69	43.558
ENSATEG00000002534	gfi1b	69	46.753	ENSATEG00000024503	znf236	57	46.753
ENSATEG00000002534	gfi1b	54	45.652	ENSATEG00000008761	-	56	45.652
ENSATEG00000002534	gfi1b	56	43.478	ENSATEG00000015238	-	64	43.478
ENSATEG00000002534	gfi1b	51	39.259	ENSATEG00000000589	znf652	77	39.259
ENSATEG00000002534	gfi1b	58	42.857	ENSATEG00000010560	-	87	42.857
ENSATEG00000002534	gfi1b	54	43.609	ENSATEG00000022839	ZNF319	93	43.609
ENSATEG00000002534	gfi1b	53	45.000	ENSATEG00000008320	-	86	45.000
ENSATEG00000002534	gfi1b	60	44.361	ENSATEG00000005519	-	96	42.500
ENSATEG00000002534	gfi1b	53	43.382	ENSATEG00000024551	-	66	43.382
ENSATEG00000002534	gfi1b	52	31.538	ENSATEG00000004944	-	98	31.538
ENSATEG00000002534	gfi1b	78	45.625	ENSATEG00000018051	-	97	46.203
ENSATEG00000002534	gfi1b	75	43.125	ENSATEG00000004127	-	96	41.259
ENSATEG00000002534	gfi1b	69	43.119	ENSATEG00000018931	-	94	43.119
ENSATEG00000002534	gfi1b	58	44.172	ENSATEG00000017618	-	90	44.172
ENSATEG00000002534	gfi1b	59	39.881	ENSATEG00000007325	-	81	39.881
ENSATEG00000002534	gfi1b	61	39.535	ENSATEG00000019378	-	59	39.535
ENSATEG00000002534	gfi1b	57	45.000	ENSATEG00000003344	-	70	45.000
ENSATEG00000002534	gfi1b	100	51.832	ENSATEG00000009167	gfi1ab	89	51.832
ENSATEG00000002534	gfi1b	51	34.759	ENSATEG00000022022	-	93	34.225
ENSATEG00000002534	gfi1b	51	42.754	ENSATEG00000008683	si:ch211-241b2.1	71	42.754
ENSATEG00000002534	gfi1b	51	40.972	ENSATEG00000019261	-	80	41.216
ENSATEG00000002534	gfi1b	77	40.777	ENSATEG00000011221	-	54	37.821
ENSATEG00000002534	gfi1b	51	45.865	ENSATEG00000021602	-	65	45.865
ENSATEG00000002534	gfi1b	58	44.172	ENSATEG00000015695	-	90	44.172
ENSATEG00000002534	gfi1b	58	44.737	ENSATEG00000014684	-	96	44.737
ENSATEG00000002534	gfi1b	52	41.818	ENSATEG00000010859	-	86	41.818
ENSATEG00000002534	gfi1b	53	39.375	ENSATEG00000013871	-	52	39.375
ENSATEG00000002534	gfi1b	100	57.402	ENSATEG00000019026	gfi1aa	100	57.402
ENSATEG00000002534	gfi1b	64	41.250	ENSATEG00000018374	GZF1	87	41.250
ENSATEG00000002534	gfi1b	57	43.373	ENSATEG00000023044	-	86	43.373
ENSATEG00000002534	gfi1b	62	43.787	ENSATEG00000008674	-	58	43.787
ENSATEG00000002534	gfi1b	54	43.609	ENSATEG00000009345	znf319b	86	43.609
ENSATEG00000002534	gfi1b	52	32.184	ENSATEG00000024492	znf407	60	32.184
ENSATEG00000002534	gfi1b	58	33.005	ENSATEG00000014755	-	79	33.005
ENSATEG00000002534	gfi1b	70	47.059	ENSATEG00000014239	-	87	47.059
ENSATEG00000002534	gfi1b	50	45.000	ENSATEG00000011115	-	98	45.000
ENSATEG00000002534	gfi1b	54	40.854	ENSATEG00000013829	prdm5	73	40.854
ENSATEG00000002534	gfi1b	78	45.625	ENSATEG00000001815	-	97	45.695
ENSATEG00000002534	gfi1b	55	44.375	ENSATEG00000018195	-	87	44.375
ENSATEG00000002534	gfi1b	58	42.857	ENSATEG00000011202	-	63	42.857
ENSATEG00000002534	gfi1b	50	45.946	ENSATEG00000002302	scrt1b	53	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000002534	gfi1b	100	83.587	ENSAPOG00000001296	gfi1b	100	83.587	Acanthochromis_polyacanthus
ENSATEG00000002534	gfi1b	99	70.517	ENSACIG00000002190	gfi1b	99	70.517	Amphilophus_citrinellus
ENSATEG00000002534	gfi1b	100	84.498	ENSAOCG00000021187	gfi1b	100	84.498	Amphiprion_ocellaris
ENSATEG00000002534	gfi1b	100	84.498	ENSAPEG00000016196	gfi1b	100	84.498	Amphiprion_percula
ENSATEG00000002534	gfi1b	100	60.117	ENSAPLG00000003373	GFI1B	100	60.117	Anas_platyrhynchos
ENSATEG00000002534	gfi1b	100	78.419	ENSACLG00000027053	gfi1b	100	78.419	Astatotilapia_calliptera
ENSATEG00000002534	gfi1b	100	74.118	ENSAMXG00000037544	GFI1B	100	74.118	Astyanax_mexicanus
ENSATEG00000002534	gfi1b	100	58.876	ENSCAPG00000010404	GFI1B	100	58.876	Cavia_aperea
ENSATEG00000002534	gfi1b	100	58.841	ENSCPBG00000021186	GFI1B	100	58.841	Chrysemys_picta_bellii
ENSATEG00000002534	gfi1b	100	79.341	ENSCSEG00000001315	gfi1b	100	79.341	Cynoglossus_semilaevis
ENSATEG00000002534	gfi1b	100	77.204	ENSCVAG00000017168	gfi1b	100	77.204	Cyprinodon_variegatus
ENSATEG00000002534	gfi1b	100	70.588	ENSDARG00000079947	gfi1b	99	85.654	Danio_rerio
ENSATEG00000002534	gfi1b	69	50.220	ENSEEUG00000012609	-	100	50.220	Erinaceus_europaeus
ENSATEG00000002534	gfi1b	100	77.448	ENSELUG00000016933	gfi1b	100	77.448	Esox_lucius
ENSATEG00000002534	gfi1b	100	54.201	ENSFALG00000001479	GFI1B	100	54.201	Ficedula_albicollis
ENSATEG00000002534	gfi1b	100	85.410	ENSFHEG00000015138	gfi1b	100	85.410	Fundulus_heteroclitus
ENSATEG00000002534	gfi1b	78	80.934	ENSGMOG00000019123	gfi1b	94	80.934	Gadus_morhua
ENSATEG00000002534	gfi1b	100	58.908	ENSGALG00000003478	GFI1B	100	58.908	Gallus_gallus
ENSATEG00000002534	gfi1b	71	92.308	ENSGAFG00000003059	gfi1b	100	92.308	Gambusia_affinis
ENSATEG00000002534	gfi1b	100	76.554	ENSGACG00000018134	gfi1b	100	76.554	Gasterosteus_aculeatus
ENSATEG00000002534	gfi1b	100	59.459	ENSGAGG00000021327	GFI1B	100	59.459	Gopherus_agassizii
ENSATEG00000002534	gfi1b	100	78.419	ENSHBUG00000005451	gfi1b	100	78.419	Haplochromis_burtoni
ENSATEG00000002534	gfi1b	100	77.204	ENSHCOG00000013713	gfi1b	100	77.204	Hippocampus_comes
ENSATEG00000002534	gfi1b	100	73.952	ENSIPUG00000012769	gfi1b	100	73.952	Ictalurus_punctatus
ENSATEG00000002534	gfi1b	99	54.301	ENSJJAG00000016355	Gfi1b	100	54.301	Jaculus_jaculus
ENSATEG00000002534	gfi1b	100	81.928	ENSKMAG00000016047	gfi1b	100	81.928	Kryptolebias_marmoratus
ENSATEG00000002534	gfi1b	100	82.583	ENSLBEG00000020297	gfi1b	99	83.483	Labrus_bergylta
ENSATEG00000002534	gfi1b	100	61.194	ENSLACG00000012207	GFI1B	100	61.194	Latimeria_chalumnae
ENSATEG00000002534	gfi1b	100	68.824	ENSLOCG00000005750	gfi1b	100	68.824	Lepisosteus_oculatus
ENSATEG00000002534	gfi1b	100	58.892	ENSLAFG00000022367	GFI1B	100	58.430	Loxodonta_africana
ENSATEG00000002534	gfi1b	100	89.970	ENSMAMG00000003040	gfi1b	100	89.970	Mastacembelus_armatus
ENSATEG00000002534	gfi1b	99	78.354	ENSMZEG00005015594	gfi1b	99	78.354	Maylandia_zebra
ENSATEG00000002534	gfi1b	100	58.523	ENSMGAG00000006129	GFI1B	100	58.523	Meleagris_gallopavo
ENSATEG00000002534	gfi1b	100	84.848	ENSMMOG00000011764	gfi1b	100	84.848	Mola_mola
ENSATEG00000002534	gfi1b	100	54.247	ENSMODG00000012600	GFI1B	100	54.247	Monodelphis_domestica
ENSATEG00000002534	gfi1b	100	86.626	ENSMALG00000004034	gfi1b	100	86.626	Monopterus_albus
ENSATEG00000002534	gfi1b	100	57.738	ENSNGAG00000003333	Gfi1b	100	58.580	Nannospalax_galili
ENSATEG00000002534	gfi1b	100	78.485	ENSNBRG00000012391	gfi1b	100	78.485	Neolamprologus_brichardi
ENSATEG00000002534	gfi1b	100	79.091	ENSONIG00000013011	gfi1b	94	92.179	Oreochromis_niloticus
ENSATEG00000002534	gfi1b	100	59.763	ENSOANG00000014723	GFI1B	100	59.763	Ornithorhynchus_anatinus
ENSATEG00000002534	gfi1b	84	76.534	ENSORLG00000014390	GFI1B	96	76.534	Oryzias_latipes
ENSATEG00000002534	gfi1b	100	81.155	ENSORLG00020003719	GFI1B	100	81.155	Oryzias_latipes_hni
ENSATEG00000002534	gfi1b	100	80.547	ENSORLG00015017142	gfi1b	100	80.547	Oryzias_latipes_hsok
ENSATEG00000002534	gfi1b	100	78.116	ENSOMEG00000015149	GFI1B	100	78.419	Oryzias_melastigma
ENSATEG00000002534	gfi1b	100	56.980	ENSOGAG00000008879	GFI1B	100	56.980	Otolemur_garnettii
ENSATEG00000002534	gfi1b	100	73.156	ENSPKIG00000007643	gfi1b	100	73.156	Paramormyrops_kingsleyae
ENSATEG00000002534	gfi1b	100	60.465	ENSPSIG00000012112	GFI1B	100	60.465	Pelodiscus_sinensis
ENSATEG00000002534	gfi1b	99	69.162	ENSPMGG00000006021	gfi1b	99	70.060	Periophthalmus_magnuspinnatus
ENSATEG00000002534	gfi1b	100	52.033	ENSPCIG00000019724	GFI1B	100	52.033	Phascolarctos_cinereus
ENSATEG00000002534	gfi1b	100	82.738	ENSPFOG00000003460	gfi1b	100	82.738	Poecilia_formosa
ENSATEG00000002534	gfi1b	100	84.242	ENSPLAG00000021960	GFI1B	100	84.242	Poecilia_latipinna
ENSATEG00000002534	gfi1b	100	81.121	ENSPLAG00000017181	GFI1B	100	81.121	Poecilia_latipinna
ENSATEG00000002534	gfi1b	100	83.939	ENSPMEG00000019220	gfi1b	100	83.939	Poecilia_mexicana
ENSATEG00000002534	gfi1b	100	83.939	ENSPMEG00000001556	GFI1B	100	83.939	Poecilia_mexicana
ENSATEG00000002534	gfi1b	100	82.979	ENSPREG00000021718	gfi1b	100	82.979	Poecilia_reticulata
ENSATEG00000002534	gfi1b	100	77.108	ENSPNYG00000018422	gfi1b	100	77.108	Pundamilia_nyererei
ENSATEG00000002534	gfi1b	100	73.214	ENSPNAG00000021118	gfi1b	100	73.214	Pygocentrus_nattereri
ENSATEG00000002534	gfi1b	100	48.925	ENSSHAG00000006462	GFI1B	100	48.925	Sarcophilus_harrisii
ENSATEG00000002534	gfi1b	83	65.000	ENSSFOG00015011566	gfi1b	90	65.000	Scleropages_formosus
ENSATEG00000002534	gfi1b	100	84.545	ENSSMAG00000015181	gfi1b	98	84.545	Scophthalmus_maximus
ENSATEG00000002534	gfi1b	100	89.970	ENSSDUG00000011604	gfi1b	100	89.970	Seriola_dumerili
ENSATEG00000002534	gfi1b	100	89.970	ENSSLDG00000013823	gfi1b	100	89.970	Seriola_lalandi_dorsalis
ENSATEG00000002534	gfi1b	100	50.729	ENSSPUG00000016039	GFI1B	100	50.729	Sphenodon_punctatus
ENSATEG00000002534	gfi1b	100	86.018	ENSSPAG00000022914	gfi1b	100	86.018	Stegastes_partitus
ENSATEG00000002534	gfi1b	64	48.408	ENSTGUG00000015953	-	82	48.408	Taeniopygia_guttata
ENSATEG00000002534	gfi1b	50	92.105	ENSTGUG00000005282	-	99	92.105	Taeniopygia_guttata
ENSATEG00000002534	gfi1b	100	80.243	ENSTRUG00000004525	gfi1b	100	80.243	Takifugu_rubripes
ENSATEG00000002534	gfi1b	100	78.485	ENSTNIG00000003834	gfi1b	100	78.485	Tetraodon_nigroviridis
ENSATEG00000002534	gfi1b	100	44.868	ENSTBEG00000014459	GFI1B	100	44.868	Tupaia_belangeri
ENSATEG00000002534	gfi1b	100	55.814	ENSXETG00000006263	gfi1b	100	58.065	Xenopus_tropicalis
ENSATEG00000002534	gfi1b	100	82.979	ENSXMAG00000027589	gfi1b	100	82.979	Xiphophorus_maculatus