EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000002883 (Gene tree)
Gene ID: 113164025
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 5102 bases
Position: chrOOHO01000004.1:37949313-37954414
Accession: 113164025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000004097	Exo_endo_phos	PF03372.23	1.1e-19	1	1
ENSATEP00000004115	Exo_endo_phos	PF03372.23	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000004133	-	3904	-	ENSATEP00000004097	317 (aa)	XP_026218898	UPI000E460966
ENSATET00000004151	-	4154	-	ENSATEP00000004115	317 (aa)	XP_026218898	UPI000E460966

Gene Model

Click here to download ENSATEG00000002883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000002883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000002883	apex1	97	66.772	ENSG00000100823	APEX1	99	59.064	Homo_sapiens
ENSATEG00000002883	apex1	97	88.026	ENSAPOG00000017002	apex1	99	88.026	Acanthochromis_polyacanthus
ENSATEG00000002883	apex1	97	67.089	ENSAMEG00000005418	APEX1	99	67.089	Ailuropoda_melanoleuca
ENSATEG00000002883	apex1	87	92.029	ENSACIG00000010653	apex1	93	91.971	Amphilophus_citrinellus
ENSATEG00000002883	apex1	97	88.997	ENSAOCG00000009649	apex1	99	88.997	Amphiprion_ocellaris
ENSATEG00000002883	apex1	97	89.320	ENSAPEG00000021453	apex1	99	89.320	Amphiprion_percula
ENSATEG00000002883	apex1	88	72.043	ENSACAG00000008099	APEX1	86	72.628	Anolis_carolinensis
ENSATEG00000002883	apex1	97	67.405	ENSANAG00000030117	APEX1	99	66.984	Aotus_nancymaae
ENSATEG00000002883	apex1	97	91.909	ENSACLG00000018441	apex1	99	91.909	Astatotilapia_calliptera
ENSATEG00000002883	apex1	97	85.113	ENSAMXG00000034699	apex1	99	82.201	Astyanax_mexicanus
ENSATEG00000002883	apex1	97	66.032	ENSBTAG00000002745	APEX1	99	66.032	Bos_taurus
ENSATEG00000002883	apex1	89	44.406	WBGene00001372	exo-3	92	45.318	Caenorhabditis_elegans
ENSATEG00000002883	apex1	97	67.405	ENSCJAG00000009726	APEX1	99	67.405	Callithrix_jacchus
ENSATEG00000002883	apex1	97	68.038	ENSCAFG00000032033	APEX1	99	68.038	Canis_familiaris
ENSATEG00000002883	apex1	52	63.158	ENSCAFG00020023002	-	94	63.158	Canis_lupus_dingo
ENSATEG00000002883	apex1	97	68.038	ENSCAFG00020014377	-	99	68.038	Canis_lupus_dingo
ENSATEG00000002883	apex1	97	66.032	ENSCHIG00000007298	-	99	66.032	Capra_hircus
ENSATEG00000002883	apex1	85	57.407	ENSCHIG00000014537	-	86	56.667	Capra_hircus
ENSATEG00000002883	apex1	97	66.139	ENSTSYG00000034813	APEX1	86	69.818	Carlito_syrichta
ENSATEG00000002883	apex1	90	63.322	ENSCAPG00000016235	APEX1	90	71.064	Cavia_aperea
ENSATEG00000002883	apex1	97	67.405	ENSCPOG00000030909	APEX1	86	71.898	Cavia_porcellus
ENSATEG00000002883	apex1	97	67.405	ENSCCAG00000033056	-	99	67.405	Cebus_capucinus
ENSATEG00000002883	apex1	97	57.778	ENSCCAG00000031931	-	86	61.679	Cebus_capucinus
ENSATEG00000002883	apex1	97	66.456	ENSCATG00000015580	APEX1	86	70.803	Cercocebus_atys
ENSATEG00000002883	apex1	97	66.772	ENSCLAG00000001002	APEX1	86	70.909	Chinchilla_lanigera
ENSATEG00000002883	apex1	97	66.772	ENSCSAG00000016670	-	86	71.168	Chlorocebus_sabaeus
ENSATEG00000002883	apex1	97	66.772	ENSCSAG00000016685	-	86	71.168	Chlorocebus_sabaeus
ENSATEG00000002883	apex1	97	70.159	ENSCPBG00000009567	APEX1	86	75.547	Chrysemys_picta_bellii
ENSATEG00000002883	apex1	96	56.721	ENSCING00000008137	-	85	61.278	Ciona_intestinalis
ENSATEG00000002883	apex1	93	49.505	ENSCSAVG00000007144	-	99	55.253	Ciona_savignyi
ENSATEG00000002883	apex1	97	66.667	ENSCANG00000030726	APEX1	99	66.667	Colobus_angolensis_palliatus
ENSATEG00000002883	apex1	97	66.242	ENSCGRG00001017046	Apex1	99	66.242	Cricetulus_griseus_chok1gshd
ENSATEG00000002883	apex1	97	66.242	ENSCGRG00000008984	Apex1	99	66.242	Cricetulus_griseus_crigri
ENSATEG00000002883	apex1	97	87.055	ENSCSEG00000017499	apex1	99	87.055	Cynoglossus_semilaevis
ENSATEG00000002883	apex1	97	92.557	ENSCVAG00000022075	apex1	99	92.557	Cyprinodon_variegatus
ENSATEG00000002883	apex1	97	83.766	ENSDARG00000045843	apex1	99	83.766	Danio_rerio
ENSATEG00000002883	apex1	97	63.291	ENSDNOG00000042234	APEX1	81	68.000	Dasypus_novemcinctus
ENSATEG00000002883	apex1	97	66.456	ENSDORG00000001616	Apex1	86	70.545	Dipodomys_ordii
ENSATEG00000002883	apex1	97	67.405	ENSETEG00000004855	-	86	71.533	Echinops_telfairi
ENSATEG00000002883	apex1	74	62.025	ENSEBUG00000000622	-	91	62.025	Eptatretus_burgeri
ENSATEG00000002883	apex1	97	67.722	ENSEASG00005017489	APEX1	73	67.089	Equus_asinus_asinus
ENSATEG00000002883	apex1	97	67.722	ENSECAG00000022325	APEX1	81	67.089	Equus_caballus
ENSATEG00000002883	apex1	85	70.632	ENSEEUG00000012569	APEX1	92	70.677	Erinaceus_europaeus
ENSATEG00000002883	apex1	97	84.142	ENSELUG00000021706	apex1	99	83.495	Esox_lucius
ENSATEG00000002883	apex1	97	67.722	ENSFCAG00000030869	APEX1	99	67.405	Felis_catus
ENSATEG00000002883	apex1	97	68.354	ENSFDAG00000006120	APEX1	86	72.000	Fukomys_damarensis
ENSATEG00000002883	apex1	97	91.909	ENSFHEG00000009031	apex1	83	91.909	Fundulus_heteroclitus
ENSATEG00000002883	apex1	97	77.994	ENSGMOG00000007943	apex1	99	77.994	Gadus_morhua
ENSATEG00000002883	apex1	97	92.557	ENSGAFG00000005311	apex1	99	92.557	Gambusia_affinis
ENSATEG00000002883	apex1	97	91.262	ENSGACG00000019497	apex1	99	92.453	Gasterosteus_aculeatus
ENSATEG00000002883	apex1	97	70.159	ENSGAGG00000014999	APEX1	99	70.159	Gopherus_agassizii
ENSATEG00000002883	apex1	97	66.456	ENSGGOG00000002128	APEX1	86	70.803	Gorilla_gorilla
ENSATEG00000002883	apex1	97	91.909	ENSHBUG00000005894	apex1	99	91.909	Haplochromis_burtoni
ENSATEG00000002883	apex1	97	68.354	ENSHGLG00000002848	APEX1	86	72.000	Heterocephalus_glaber_female
ENSATEG00000002883	apex1	97	68.354	ENSHGLG00100017878	APEX1	86	72.000	Heterocephalus_glaber_male
ENSATEG00000002883	apex1	97	86.774	ENSHCOG00000009961	apex1	99	83.548	Hippocampus_comes
ENSATEG00000002883	apex1	97	84.142	ENSIPUG00000005799	apex1	99	81.230	Ictalurus_punctatus
ENSATEG00000002883	apex1	97	67.722	ENSSTOG00000010096	APEX1	99	67.405	Ictidomys_tridecemlineatus
ENSATEG00000002883	apex1	97	59.683	ENSJJAG00000003660	-	99	59.683	Jaculus_jaculus
ENSATEG00000002883	apex1	87	62.590	ENSJJAG00000020465	-	88	62.545	Jaculus_jaculus
ENSATEG00000002883	apex1	97	66.349	ENSJJAG00000012067	-	86	70.545	Jaculus_jaculus
ENSATEG00000002883	apex1	97	90.615	ENSKMAG00000021171	apex1	99	90.615	Kryptolebias_marmoratus
ENSATEG00000002883	apex1	97	92.233	ENSLBEG00000010248	apex1	99	92.233	Labrus_bergylta
ENSATEG00000002883	apex1	97	73.482	ENSLACG00000008617	APEX1	87	79.121	Latimeria_chalumnae
ENSATEG00000002883	apex1	97	78.205	ENSLOCG00000015516	apex1	98	77.564	Lepisosteus_oculatus
ENSATEG00000002883	apex1	97	66.984	ENSLAFG00000021872	APEX1	86	72.263	Loxodonta_africana
ENSATEG00000002883	apex1	97	66.456	ENSMFAG00000002565	APEX1	86	70.803	Macaca_fascicularis
ENSATEG00000002883	apex1	97	66.456	ENSMMUG00000048039	APEX1	86	70.803	Macaca_mulatta
ENSATEG00000002883	apex1	97	66.456	ENSMNEG00000036944	APEX1	99	66.139	Macaca_nemestrina
ENSATEG00000002883	apex1	97	66.456	ENSMLEG00000042125	APEX1	86	70.803	Mandrillus_leucophaeus
ENSATEG00000002883	apex1	97	93.204	ENSMAMG00000023526	apex1	99	93.204	Mastacembelus_armatus
ENSATEG00000002883	apex1	97	91.909	ENSMZEG00005014187	apex1	99	91.909	Maylandia_zebra
ENSATEG00000002883	apex1	97	66.349	ENSMAUG00000013994	Apex1	99	66.032	Mesocricetus_auratus
ENSATEG00000002883	apex1	97	67.089	ENSMICG00000043554	APEX1	99	66.456	Microcebus_murinus
ENSATEG00000002883	apex1	97	67.722	ENSMOCG00000013721	Apex1	99	67.197	Microtus_ochrogaster
ENSATEG00000002883	apex1	97	86.129	ENSMMOG00000010031	apex1	97	84.839	Mola_mola
ENSATEG00000002883	apex1	87	70.504	ENSMODG00000007125	APEX1	86	71.168	Monodelphis_domestica
ENSATEG00000002883	apex1	88	84.946	ENSMALG00000011699	apex1	73	84.672	Monopterus_albus
ENSATEG00000002883	apex1	97	67.516	MGP_CAROLIEiJ_G0019209	Apex1	99	67.516	Mus_caroli
ENSATEG00000002883	apex1	97	67.516	ENSMUSG00000035960	Apex1	99	67.516	Mus_musculus
ENSATEG00000002883	apex1	97	67.834	MGP_PahariEiJ_G0030232	Apex1	99	67.834	Mus_pahari
ENSATEG00000002883	apex1	97	67.516	MGP_SPRETEiJ_G0020101	Apex1	99	67.516	Mus_spretus
ENSATEG00000002883	apex1	97	66.352	ENSMLUG00000028957	APEX1	86	70.909	Myotis_lucifugus
ENSATEG00000002883	apex1	85	54.676	ENSNGAG00000021748	-	85	53.597	Nannospalax_galili
ENSATEG00000002883	apex1	97	67.405	ENSNGAG00000002725	-	99	66.456	Nannospalax_galili
ENSATEG00000002883	apex1	97	91.909	ENSNBRG00000005334	apex1	91	91.909	Neolamprologus_brichardi
ENSATEG00000002883	apex1	97	66.774	ENSNLEG00000010839	APEX1	99	66.032	Nomascus_leucogenys
ENSATEG00000002883	apex1	97	66.667	ENSMEUG00000014519	APEX1	87	70.696	Notamacropus_eugenii
ENSATEG00000002883	apex1	97	66.984	ENSOPRG00000014029	APEX1	99	66.984	Ochotona_princeps
ENSATEG00000002883	apex1	95	52.318	ENSODEG00000004777	-	83	57.540	Octodon_degus
ENSATEG00000002883	apex1	97	67.405	ENSODEG00000001703	-	86	71.636	Octodon_degus
ENSATEG00000002883	apex1	97	52.484	ENSODEG00000006583	-	85	55.160	Octodon_degus
ENSATEG00000002883	apex1	97	91.909	ENSONIG00000012089	apex1	99	91.909	Oreochromis_niloticus
ENSATEG00000002883	apex1	89	68.662	ENSOANG00000008836	APEX1	68	70.073	Ornithorhynchus_anatinus
ENSATEG00000002883	apex1	97	67.405	ENSOCUG00000005022	APEX1	99	67.405	Oryctolagus_cuniculus
ENSATEG00000002883	apex1	97	92.581	ENSORLG00000012378	apex1	99	92.581	Oryzias_latipes
ENSATEG00000002883	apex1	97	92.581	ENSORLG00020021371	apex1	99	92.581	Oryzias_latipes_hni
ENSATEG00000002883	apex1	97	92.581	ENSORLG00015020089	apex1	99	92.581	Oryzias_latipes_hsok
ENSATEG00000002883	apex1	97	91.613	ENSOMEG00000018876	apex1	99	91.613	Oryzias_melastigma
ENSATEG00000002883	apex1	87	64.029	ENSOGAG00000029355	-	87	64.000	Otolemur_garnettii
ENSATEG00000002883	apex1	97	68.038	ENSOGAG00000013335	-	99	68.038	Otolemur_garnettii
ENSATEG00000002883	apex1	94	63.072	ENSOARG00000001876	-	99	63.072	Ovis_aries
ENSATEG00000002883	apex1	97	66.032	ENSOARG00000019740	-	99	66.032	Ovis_aries
ENSATEG00000002883	apex1	94	57.475	ENSOARG00000014424	-	88	59.273	Ovis_aries
ENSATEG00000002883	apex1	97	67.097	ENSPPAG00000038760	APEX1	88	71.168	Pan_paniscus
ENSATEG00000002883	apex1	97	67.405	ENSPPRG00000011794	APEX1	99	67.405	Panthera_pardus
ENSATEG00000002883	apex1	97	67.722	ENSPTIG00000014829	APEX1	99	67.405	Panthera_tigris_altaica
ENSATEG00000002883	apex1	97	67.097	ENSPTRG00000006093	APEX1	88	71.168	Pan_troglodytes
ENSATEG00000002883	apex1	97	66.456	ENSPANG00000022757	APEX1	86	70.803	Papio_anubis
ENSATEG00000002883	apex1	87	87.273	ENSPKIG00000003504	apex1	99	81.994	Paramormyrops_kingsleyae
ENSATEG00000002883	apex1	85	76.103	ENSPMGG00000016596	apex1	80	76.103	Periophthalmus_magnuspinnatus
ENSATEG00000002883	apex1	97	66.879	ENSPEMG00000019097	Apex1	99	66.879	Peromyscus_maniculatus_bairdii
ENSATEG00000002883	apex1	91	73.448	ENSPMAG00000007275	-	93	74.818	Petromyzon_marinus
ENSATEG00000002883	apex1	87	69.784	ENSPCIG00000023274	APEX1	86	70.696	Phascolarctos_cinereus
ENSATEG00000002883	apex1	97	92.233	ENSPFOG00000004178	apex1	99	92.233	Poecilia_formosa
ENSATEG00000002883	apex1	97	92.557	ENSPLAG00000012779	apex1	99	92.557	Poecilia_latipinna
ENSATEG00000002883	apex1	97	92.233	ENSPMEG00000019623	apex1	99	92.233	Poecilia_mexicana
ENSATEG00000002883	apex1	97	91.262	ENSPREG00000014298	apex1	99	91.262	Poecilia_reticulata
ENSATEG00000002883	apex1	97	66.772	ENSPPYG00000005565	APEX1	86	70.803	Pongo_abelii
ENSATEG00000002883	apex1	97	65.506	ENSPCAG00000010376	APEX1	99	64.762	Procavia_capensis
ENSATEG00000002883	apex1	97	67.405	ENSPCOG00000021564	APEX1	99	66.772	Propithecus_coquereli
ENSATEG00000002883	apex1	97	66.667	ENSPVAG00000010736	APEX1	86	71.533	Pteropus_vampyrus
ENSATEG00000002883	apex1	97	92.233	ENSPNYG00000023940	apex1	99	92.233	Pundamilia_nyererei
ENSATEG00000002883	apex1	99	78.413	ENSPNAG00000020897	apex1	96	84.912	Pygocentrus_nattereri
ENSATEG00000002883	apex1	97	66.879	ENSRNOG00000009663	Apex1	99	66.879	Rattus_norvegicus
ENSATEG00000002883	apex1	97	66.772	ENSRBIG00000038325	APEX1	85	71.168	Rhinopithecus_bieti
ENSATEG00000002883	apex1	97	60.194	ENSSBOG00000031372	-	89	63.504	Saimiri_boliviensis_boliviensis
ENSATEG00000002883	apex1	97	67.405	ENSSBOG00000018921	-	86	71.898	Saimiri_boliviensis_boliviensis
ENSATEG00000002883	apex1	97	63.190	ENSSHAG00000013524	APEX1	85	69.928	Sarcophilus_harrisii
ENSATEG00000002883	apex1	97	80.583	ENSSFOG00015001948	apex1	99	83.172	Scleropages_formosus
ENSATEG00000002883	apex1	97	88.217	ENSSMAG00000013348	apex1	99	89.137	Scophthalmus_maximus
ENSATEG00000002883	apex1	97	90.291	ENSSDUG00000016377	apex1	99	90.291	Seriola_dumerili
ENSATEG00000002883	apex1	97	89.968	ENSSLDG00000023005	apex1	99	89.968	Seriola_lalandi_dorsalis
ENSATEG00000002883	apex1	88	73.214	ENSSPUG00000000531	APEX1	93	73.723	Sphenodon_punctatus
ENSATEG00000002883	apex1	97	89.320	ENSSPAG00000000458	apex1	99	89.320	Stegastes_partitus
ENSATEG00000002883	apex1	97	66.984	ENSSSCG00000040060	-	99	66.984	Sus_scrofa
ENSATEG00000002883	apex1	93	41.060	ENSSSCG00000039705	-	88	43.116	Sus_scrofa
ENSATEG00000002883	apex1	74	58.120	ENSTGUG00000014378	APEX1	99	58.120	Taeniopygia_guttata
ENSATEG00000002883	apex1	97	83.974	ENSTRUG00000004268	apex1	95	85.577	Takifugu_rubripes
ENSATEG00000002883	apex1	97	85.437	ENSTNIG00000005778	apex1	99	85.437	Tetraodon_nigroviridis
ENSATEG00000002883	apex1	97	64.241	ENSTBEG00000006405	APEX1	99	64.241	Tupaia_belangeri
ENSATEG00000002883	apex1	74	69.658	ENSTTRG00000007860	APEX1	99	69.658	Tursiops_truncatus
ENSATEG00000002883	apex1	97	67.089	ENSUAMG00000010457	APEX1	99	66.772	Ursus_americanus
ENSATEG00000002883	apex1	97	67.089	ENSUMAG00000009178	APEX1	99	66.772	Ursus_maritimus
ENSATEG00000002883	apex1	74	65.385	ENSVPAG00000005083	APEX1	99	65.385	Vicugna_pacos
ENSATEG00000002883	apex1	97	67.722	ENSVVUG00000009010	APEX1	99	67.722	Vulpes_vulpes
ENSATEG00000002883	apex1	97	69.010	ENSXETG00000024773	apex1	99	69.010	Xenopus_tropicalis
ENSATEG00000002883	apex1	97	93.204	ENSXCOG00000015233	apex1	99	93.204	Xiphophorus_couchianus
ENSATEG00000002883	apex1	97	93.204	ENSXMAG00000006195	apex1	99	93.204	Xiphophorus_maculatus