EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000003656 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat containing 6C2
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 14363 bases
Position: chrOOHO01000002.1:15136514-15150876
Accession: ZDB-GENE-061207-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000005336	Ago_hook	PF10427.9	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000005426	-	4542	-	ENSATEP00000005336	1513 (aa)	-	-

Gene Model

Click here to download ENSATEG00000003656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000003656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000003656	tnrc6c2	99	90.177	ENSAOCG00000017648	tnrc6c2	82	90.287	Amphiprion_ocellaris
ENSATEG00000003656	tnrc6c2	100	89.956	ENSACLG00000006469	tnrc6c2	83	89.956	Astatotilapia_calliptera
ENSATEG00000003656	tnrc6c2	57	72.316	ENSAMXG00000009579	tnrc6c2	99	57.704	Astyanax_mexicanus
ENSATEG00000003656	tnrc6c2	100	58.069	ENSDARG00000103851	tnrc6c2	58	72.044	Danio_rerio
ENSATEG00000003656	tnrc6c2	99	67.249	ENSELUG00000008149	-	94	53.892	Esox_lucius
ENSATEG00000003656	tnrc6c2	100	61.368	ENSELUG00000007206	tnrc6c2	99	61.317	Esox_lucius
ENSATEG00000003656	tnrc6c2	57	83.370	ENSFHEG00000003901	tnrc6c2	96	85.683	Fundulus_heteroclitus
ENSATEG00000003656	tnrc6c2	100	77.943	ENSGACG00000019401	tnrc6c2	90	76.766	Gasterosteus_aculeatus
ENSATEG00000003656	tnrc6c2	100	89.956	ENSHBUG00000018310	tnrc6c2	83	89.956	Haplochromis_burtoni
ENSATEG00000003656	tnrc6c2	57	85.526	ENSHCOG00000017802	tnrc6c2	83	84.978	Hippocampus_comes
ENSATEG00000003656	tnrc6c2	100	53.407	ENSIPUG00000022767	tnrc6c2	99	51.035	Ictalurus_punctatus
ENSATEG00000003656	tnrc6c2	57	90.518	ENSMAMG00000001718	tnrc6c2	95	90.077	Mastacembelus_armatus
ENSATEG00000003656	tnrc6c2	100	89.956	ENSMZEG00005023905	tnrc6c2	83	89.956	Maylandia_zebra
ENSATEG00000003656	tnrc6c2	57	89.814	ENSMALG00000020932	tnrc6c2	95	89.266	Monopterus_albus
ENSATEG00000003656	tnrc6c2	100	89.020	ENSNBRG00000000452	tnrc6c2	100	88.355	Neolamprologus_brichardi
ENSATEG00000003656	tnrc6c2	97	84.468	ENSONIG00000018123	tnrc6c2	100	84.395	Oreochromis_niloticus
ENSATEG00000003656	tnrc6c2	57	85.920	ENSORLG00000003327	tnrc6c2	83	82.203	Oryzias_latipes
ENSATEG00000003656	tnrc6c2	57	85.635	ENSORLG00020010730	tnrc6c2	83	85.635	Oryzias_latipes_hni
ENSATEG00000003656	tnrc6c2	57	85.856	ENSORLG00015009232	tnrc6c2	83	81.568	Oryzias_latipes_hsok
ENSATEG00000003656	tnrc6c2	57	86.740	ENSOMEG00000017952	tnrc6c2	83	86.740	Oryzias_melastigma
ENSATEG00000003656	tnrc6c2	99	74.346	ENSPFOG00000011590	tnrc6c2	90	74.226	Poecilia_formosa
ENSATEG00000003656	tnrc6c2	100	76.975	ENSPLAG00000006992	tnrc6c2	100	76.852	Poecilia_latipinna
ENSATEG00000003656	tnrc6c2	100	76.358	ENSPMEG00000012946	tnrc6c2	100	76.235	Poecilia_mexicana
ENSATEG00000003656	tnrc6c2	100	77.729	ENSPREG00000015823	tnrc6c2	100	77.278	Poecilia_reticulata
ENSATEG00000003656	tnrc6c2	100	89.845	ENSPNYG00000002582	tnrc6c2	95	89.845	Pundamilia_nyererei
ENSATEG00000003656	tnrc6c2	57	72.460	ENSPNAG00000026838	tnrc6c2	56	72.998	Pygocentrus_nattereri
ENSATEG00000003656	tnrc6c2	57	91.050	ENSSDUG00000020741	tnrc6c2	95	91.050	Seriola_dumerili
ENSATEG00000003656	tnrc6c2	57	90.829	ENSSLDG00000002077	tnrc6c2	95	90.829	Seriola_lalandi_dorsalis
ENSATEG00000003656	tnrc6c2	99	89.868	ENSSPAG00000013052	tnrc6c2	83	90.308	Stegastes_partitus
ENSATEG00000003656	tnrc6c2	100	74.194	ENSTNIG00000004178	tnrc6c2	95	74.614	Tetraodon_nigroviridis
ENSATEG00000003656	tnrc6c2	100	76.481	ENSXCOG00000013252	tnrc6c2	100	76.665	Xiphophorus_couchianus
ENSATEG00000003656	tnrc6c2	100	73.924	ENSXMAG00000006739	tnrc6c2	96	86.139	Xiphophorus_maculatus