EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000003864 (Gene tree)
Gene ID: 113167028
Gene Symbol: csde1
Alias: fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name: cold shock domain containing E1%2C RNA-binding
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 6373 bases
Position: chrOOHO01000023.1:6234714-6241086
Accession: ZDB-GENE-030131-8623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000005537	CSD	PF00313.22	1.2e-82	1	5
ENSATEP00000005537	CSD	PF00313.22	1.2e-82	2	5
ENSATEP00000005537	CSD	PF00313.22	1.2e-82	3	5
ENSATEP00000005537	CSD	PF00313.22	1.2e-82	4	5
ENSATEP00000005537	CSD	PF00313.22	1.2e-82	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000005628	-	2307	-	ENSATEP00000005537	768 (aa)	-	-

Gene Model

Click here to download ENSATEG00000003864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000003864's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000003864	csde1	100	77.403	ENSG00000009307	CSDE1	100	85.294	Homo_sapiens
ENSATEG00000003864	csde1	100	94.538	ENSAPOG00000015538	csde1	100	94.538	Acanthochromis_polyacanthus
ENSATEG00000003864	csde1	100	76.623	ENSAMEG00000017129	CSDE1	94	76.623	Ailuropoda_melanoleuca
ENSATEG00000003864	csde1	90	94.324	ENSACIG00000015175	csde1	100	94.324	Amphilophus_citrinellus
ENSATEG00000003864	csde1	100	94.668	ENSAOCG00000011510	csde1	100	94.668	Amphiprion_ocellaris
ENSATEG00000003864	csde1	100	94.798	ENSAPEG00000007194	csde1	100	94.798	Amphiprion_percula
ENSATEG00000003864	csde1	100	79.221	ENSAPLG00000008797	CSDE1	100	79.221	Anas_platyrhynchos
ENSATEG00000003864	csde1	100	76.404	ENSACAG00000003120	CSDE1	100	76.404	Anolis_carolinensis
ENSATEG00000003864	csde1	93	61.837	ENSANAG00000028396	-	91	61.837	Aotus_nancymaae
ENSATEG00000003864	csde1	100	77.273	ENSANAG00000024665	CSDE1	95	77.703	Aotus_nancymaae
ENSATEG00000003864	csde1	100	92.718	ENSACLG00000013296	csde1	100	92.718	Astatotilapia_calliptera
ENSATEG00000003864	csde1	100	86.381	ENSAMXG00000007436	csde1	100	86.381	Astyanax_mexicanus
ENSATEG00000003864	csde1	100	77.143	ENSBTAG00000000678	CSDE1	100	77.143	Bos_taurus
ENSATEG00000003864	csde1	100	77.273	ENSCJAG00000012565	CSDE1	94	77.273	Callithrix_jacchus
ENSATEG00000003864	csde1	98	77.851	ENSCAFG00000009618	CSDE1	94	77.851	Canis_familiaris
ENSATEG00000003864	csde1	100	77.662	ENSCAFG00020000481	CSDE1	100	77.662	Canis_lupus_dingo
ENSATEG00000003864	csde1	100	77.143	ENSCHIG00000017250	CSDE1	100	77.143	Capra_hircus
ENSATEG00000003864	csde1	100	77.403	ENSTSYG00000003747	CSDE1	100	77.403	Carlito_syrichta
ENSATEG00000003864	csde1	100	60.925	ENSCAPG00000015128	CSDE1	100	60.925	Cavia_aperea
ENSATEG00000003864	csde1	100	71.970	ENSCPOG00000040388	CSDE1	100	71.970	Cavia_porcellus
ENSATEG00000003864	csde1	100	77.273	ENSCCAG00000036794	CSDE1	100	74.282	Cebus_capucinus
ENSATEG00000003864	csde1	95	55.687	ENSCCAG00000033677	-	99	55.687	Cebus_capucinus
ENSATEG00000003864	csde1	96	54.222	ENSCCAG00000030878	-	91	54.222	Cebus_capucinus
ENSATEG00000003864	csde1	100	77.403	ENSCATG00000036962	CSDE1	97	77.403	Cercocebus_atys
ENSATEG00000003864	csde1	100	77.662	ENSCLAG00000006618	CSDE1	100	77.662	Chinchilla_lanigera
ENSATEG00000003864	csde1	100	74.407	ENSCSAG00000001658	CSDE1	95	74.407	Chlorocebus_sabaeus
ENSATEG00000003864	csde1	100	75.431	ENSCHOG00000000918	CSDE1	89	75.431	Choloepus_hoffmanni
ENSATEG00000003864	csde1	100	79.481	ENSCPBG00000016547	CSDE1	100	79.481	Chrysemys_picta_bellii
ENSATEG00000003864	csde1	97	42.577	ENSCING00000014465	-	96	42.577	Ciona_intestinalis
ENSATEG00000003864	csde1	97	41.613	ENSCSAVG00000008100	-	99	41.493	Ciona_savignyi
ENSATEG00000003864	csde1	89	79.336	ENSCANG00000031069	-	94	79.336	Colobus_angolensis_palliatus
ENSATEG00000003864	csde1	100	77.403	ENSCANG00000035096	CSDE1	97	77.403	Colobus_angolensis_palliatus
ENSATEG00000003864	csde1	100	76.753	ENSCGRG00001016833	-	100	76.753	Cricetulus_griseus_chok1gshd
ENSATEG00000003864	csde1	100	62.987	ENSCGRG00001014011	-	100	62.987	Cricetulus_griseus_chok1gshd
ENSATEG00000003864	csde1	100	73.913	ENSCGRG00000005831	-	100	73.913	Cricetulus_griseus_crigri
ENSATEG00000003864	csde1	96	72.889	ENSCGRG00000002225	-	100	72.889	Cricetulus_griseus_crigri
ENSATEG00000003864	csde1	100	90.637	ENSCSEG00000002620	csde1	100	90.637	Cynoglossus_semilaevis
ENSATEG00000003864	csde1	100	91.157	ENSCVAG00000001344	csde1	100	91.157	Cyprinodon_variegatus
ENSATEG00000003864	csde1	100	83.229	ENSDARG00000074758	csde1	100	85.714	Danio_rerio
ENSATEG00000003864	csde1	58	54.661	ENSDNOG00000034464	-	99	54.661	Dasypus_novemcinctus
ENSATEG00000003864	csde1	100	77.821	ENSDNOG00000010287	-	93	77.821	Dasypus_novemcinctus
ENSATEG00000003864	csde1	99	76.006	ENSDORG00000011609	Csde1	100	76.006	Dipodomys_ordii
ENSATEG00000003864	csde1	98	48.262	FBgn0263352	Unr	86	47.410	Drosophila_melanogaster
ENSATEG00000003864	csde1	79	53.630	ENSETEG00000007109	-	99	53.630	Echinops_telfairi
ENSATEG00000003864	csde1	93	71.470	ENSETEG00000002491	-	82	71.470	Echinops_telfairi
ENSATEG00000003864	csde1	90	68.562	ENSETEG00000006280	-	99	68.562	Echinops_telfairi
ENSATEG00000003864	csde1	99	59.818	ENSETEG00000013678	-	99	59.818	Echinops_telfairi
ENSATEG00000003864	csde1	99	53.202	ENSEBUG00000008647	csde1	99	51.551	Eptatretus_burgeri
ENSATEG00000003864	csde1	100	77.922	ENSEASG00005006284	CSDE1	100	74.906	Equus_asinus_asinus
ENSATEG00000003864	csde1	100	77.922	ENSECAG00000020885	CSDE1	99	77.622	Equus_caballus
ENSATEG00000003864	csde1	93	81.931	ENSEEUG00000006286	CSDE1	68	81.931	Erinaceus_europaeus
ENSATEG00000003864	csde1	100	86.917	ENSELUG00000015507	csde1	100	86.917	Esox_lucius
ENSATEG00000003864	csde1	100	77.662	ENSFCAG00000029266	CSDE1	100	77.662	Felis_catus
ENSATEG00000003864	csde1	100	75.780	ENSFALG00000003407	CSDE1	100	75.780	Ficedula_albicollis
ENSATEG00000003864	csde1	99	76.006	ENSFDAG00000007882	CSDE1	100	76.006	Fukomys_damarensis
ENSATEG00000003864	csde1	98	91.258	ENSFHEG00000010799	csde1	99	91.258	Fundulus_heteroclitus
ENSATEG00000003864	csde1	99	86.216	ENSGMOG00000012731	csde1	100	86.216	Gadus_morhua
ENSATEG00000003864	csde1	98	76.081	ENSGALG00000002139	CSDE1	98	76.081	Gallus_gallus
ENSATEG00000003864	csde1	94	90.534	ENSGAFG00000005241	csde1	95	90.534	Gambusia_affinis
ENSATEG00000003864	csde1	99	89.586	ENSGACG00000004544	csde1	100	89.586	Gasterosteus_aculeatus
ENSATEG00000003864	csde1	100	79.481	ENSGAGG00000017685	CSDE1	100	76.404	Gopherus_agassizii
ENSATEG00000003864	csde1	100	77.403	ENSGGOG00000002164	CSDE1	100	77.403	Gorilla_gorilla
ENSATEG00000003864	csde1	100	92.718	ENSHBUG00000020315	csde1	100	92.718	Haplochromis_burtoni
ENSATEG00000003864	csde1	100	70.649	ENSHGLG00000009620	-	100	70.779	Heterocephalus_glaber_female
ENSATEG00000003864	csde1	100	63.396	ENSHGLG00000019549	-	100	63.396	Heterocephalus_glaber_female
ENSATEG00000003864	csde1	96	67.511	ENSHGLG00000008555	-	100	67.511	Heterocephalus_glaber_female
ENSATEG00000003864	csde1	96	65.778	ENSHGLG00000010039	-	100	65.778	Heterocephalus_glaber_female
ENSATEG00000003864	csde1	99	67.192	ENSHGLG00000007471	-	98	67.192	Heterocephalus_glaber_female
ENSATEG00000003864	csde1	100	69.961	ENSHGLG00000003829	-	100	69.961	Heterocephalus_glaber_female
ENSATEG00000003864	csde1	99	59.324	ENSHGLG00000000650	-	99	59.324	Heterocephalus_glaber_female
ENSATEG00000003864	csde1	93	65.139	ENSHGLG00100004195	-	100	65.139	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	96	60.222	ENSHGLG00100004833	-	100	60.222	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	100	65.540	ENSHGLG00100012072	-	100	65.540	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	100	77.273	ENSHGLG00100019438	-	100	77.273	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	99	66.798	ENSHGLG00100007287	-	98	66.798	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	99	62.718	ENSHGLG00100002245	-	99	62.718	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	96	65.556	ENSHGLG00100006910	-	100	65.556	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	100	63.377	ENSHGLG00100001846	-	100	63.377	Heterocephalus_glaber_male
ENSATEG00000003864	csde1	100	90.247	ENSHCOG00000004158	csde1	100	90.247	Hippocampus_comes
ENSATEG00000003864	csde1	100	84.955	ENSIPUG00000000355	csde1	100	84.955	Ictalurus_punctatus
ENSATEG00000003864	csde1	100	63.648	ENSSTOG00000030994	-	100	63.648	Ictidomys_tridecemlineatus
ENSATEG00000003864	csde1	85	65.298	ENSSTOG00000032722	-	98	65.298	Ictidomys_tridecemlineatus
ENSATEG00000003864	csde1	99	76.006	ENSJJAG00000019571	Csde1	100	76.006	Jaculus_jaculus
ENSATEG00000003864	csde1	100	87.406	ENSKMAG00000005685	csde1	100	86.973	Kryptolebias_marmoratus
ENSATEG00000003864	csde1	100	93.108	ENSLBEG00000014770	csde1	100	93.108	Labrus_bergylta
ENSATEG00000003864	csde1	100	73.399	ENSLACG00000018452	CSDE1	94	73.613	Latimeria_chalumnae
ENSATEG00000003864	csde1	100	82.331	ENSLOCG00000010413	csde1	94	82.331	Lepisosteus_oculatus
ENSATEG00000003864	csde1	100	76.883	ENSLAFG00000007150	CSDE1	96	76.883	Loxodonta_africana
ENSATEG00000003864	csde1	100	77.403	ENSMFAG00000003674	CSDE1	100	77.403	Macaca_fascicularis
ENSATEG00000003864	csde1	100	77.403	ENSMMUG00000001974	CSDE1	100	77.403	Macaca_mulatta
ENSATEG00000003864	csde1	100	77.403	ENSMNEG00000045247	CSDE1	97	77.403	Macaca_nemestrina
ENSATEG00000003864	csde1	100	77.143	ENSMLEG00000038673	CSDE1	94	77.143	Mandrillus_leucophaeus
ENSATEG00000003864	csde1	100	94.148	ENSMAMG00000008821	csde1	100	94.148	Mastacembelus_armatus
ENSATEG00000003864	csde1	100	92.718	ENSMZEG00005021675	csde1	100	92.718	Maylandia_zebra
ENSATEG00000003864	csde1	100	79.118	ENSMGAG00000016381	CSDE1	100	79.118	Meleagris_gallopavo
ENSATEG00000003864	csde1	99	75.708	ENSMAUG00000014031	Csde1	100	75.708	Mesocricetus_auratus
ENSATEG00000003864	csde1	100	77.662	ENSMICG00000002050	CSDE1	96	77.604	Microcebus_murinus
ENSATEG00000003864	csde1	100	76.753	ENSMOCG00000018960	Csde1	100	76.753	Microtus_ochrogaster
ENSATEG00000003864	csde1	100	94.148	ENSMMOG00000015075	csde1	100	94.148	Mola_mola
ENSATEG00000003864	csde1	100	78.238	ENSMODG00000004685	CSDE1	100	75.905	Monodelphis_domestica
ENSATEG00000003864	csde1	100	94.408	ENSMALG00000007132	csde1	100	94.408	Monopterus_albus
ENSATEG00000003864	csde1	100	76.883	MGP_CAROLIEiJ_G0025444	Csde1	100	84.106	Mus_caroli
ENSATEG00000003864	csde1	100	76.883	ENSMUSG00000068823	Csde1	100	84.106	Mus_musculus
ENSATEG00000003864	csde1	100	76.883	MGP_PahariEiJ_G0026888	Csde1	100	84.106	Mus_pahari
ENSATEG00000003864	csde1	100	76.883	MGP_SPRETEiJ_G0026394	Csde1	100	84.106	Mus_spretus
ENSATEG00000003864	csde1	98	74.777	ENSMPUG00000005753	CSDE1	99	74.777	Mustela_putorius_furo
ENSATEG00000003864	csde1	100	77.403	ENSMLUG00000005681	CSDE1	94	77.403	Myotis_lucifugus
ENSATEG00000003864	csde1	96	52.000	ENSNGAG00000012599	-	100	52.000	Nannospalax_galili
ENSATEG00000003864	csde1	99	75.708	ENSNGAG00000021929	Csde1	100	75.708	Nannospalax_galili
ENSATEG00000003864	csde1	100	92.718	ENSNBRG00000020808	csde1	100	92.718	Neolamprologus_brichardi
ENSATEG00000003864	csde1	100	77.403	ENSNLEG00000004842	CSDE1	97	77.403	Nomascus_leucogenys
ENSATEG00000003864	csde1	98	75.729	ENSMEUG00000002677	CSDE1	99	75.729	Notamacropus_eugenii
ENSATEG00000003864	csde1	98	71.146	ENSOPRG00000005002	CSDE1	82	71.146	Ochotona_princeps
ENSATEG00000003864	csde1	99	76.006	ENSODEG00000007383	-	100	76.006	Octodon_degus
ENSATEG00000003864	csde1	96	52.434	ENSODEG00000005979	-	98	52.434	Octodon_degus
ENSATEG00000003864	csde1	100	87.271	ENSONIG00000009309	csde1	100	87.271	Oreochromis_niloticus
ENSATEG00000003864	csde1	100	83.051	ENSOANG00000003346	-	83	83.051	Ornithorhynchus_anatinus
ENSATEG00000003864	csde1	100	77.013	ENSOCUG00000016438	CSDE1	94	77.013	Oryctolagus_cuniculus
ENSATEG00000003864	csde1	100	90.637	ENSORLG00000000707	csde1	100	90.637	Oryzias_latipes
ENSATEG00000003864	csde1	100	87.218	ENSORLG00020005148	csde1	100	85.190	Oryzias_latipes_hni
ENSATEG00000003864	csde1	100	90.507	ENSORLG00015019415	csde1	100	90.507	Oryzias_latipes_hsok
ENSATEG00000003864	csde1	100	90.117	ENSOMEG00000015656	csde1	100	90.897	Oryzias_melastigma
ENSATEG00000003864	csde1	100	77.662	ENSOGAG00000012127	CSDE1	94	77.662	Otolemur_garnettii
ENSATEG00000003864	csde1	100	77.143	ENSOARG00000020034	CSDE1	94	77.143	Ovis_aries
ENSATEG00000003864	csde1	100	77.403	ENSPPAG00000025861	CSDE1	100	77.403	Pan_paniscus
ENSATEG00000003864	csde1	100	77.662	ENSPPRG00000006747	CSDE1	94	77.662	Panthera_pardus
ENSATEG00000003864	csde1	100	77.662	ENSPTIG00000015468	CSDE1	100	74.657	Panthera_tigris_altaica
ENSATEG00000003864	csde1	100	77.403	ENSPTRG00000033721	CSDE1	100	74.407	Pan_troglodytes
ENSATEG00000003864	csde1	100	77.403	ENSPANG00000018873	CSDE1	100	77.403	Papio_anubis
ENSATEG00000003864	csde1	100	85.566	ENSPKIG00000009459	csde1	100	85.566	Paramormyrops_kingsleyae
ENSATEG00000003864	csde1	96	77.313	ENSPSIG00000003823	CSDE1	96	77.313	Pelodiscus_sinensis
ENSATEG00000003864	csde1	100	89.870	ENSPMGG00000000772	csde1	100	89.870	Periophthalmus_magnuspinnatus
ENSATEG00000003864	csde1	99	76.006	ENSPEMG00000020357	-	100	76.006	Peromyscus_maniculatus_bairdii
ENSATEG00000003864	csde1	100	75.905	ENSPCIG00000022587	CSDE1	100	75.905	Phascolarctos_cinereus
ENSATEG00000003864	csde1	97	89.425	ENSPFOG00000012664	csde1	100	89.580	Poecilia_formosa
ENSATEG00000003864	csde1	95	84.178	ENSPLAG00000017680	csde1	93	84.178	Poecilia_latipinna
ENSATEG00000003864	csde1	95	84.485	ENSPMEG00000005094	csde1	95	84.485	Poecilia_mexicana
ENSATEG00000003864	csde1	100	87.531	ENSPREG00000011631	csde1	100	84.699	Poecilia_reticulata
ENSATEG00000003864	csde1	100	74.282	ENSPPYG00000000996	CSDE1	100	74.282	Pongo_abelii
ENSATEG00000003864	csde1	100	74.675	ENSPCAG00000014368	CSDE1	94	74.675	Procavia_capensis
ENSATEG00000003864	csde1	100	77.662	ENSPCOG00000017893	CSDE1	100	77.662	Propithecus_coquereli
ENSATEG00000003864	csde1	90	70.260	ENSPCOG00000008223	-	92	70.260	Propithecus_coquereli
ENSATEG00000003864	csde1	100	72.078	ENSPVAG00000008225	CSDE1	95	72.078	Pteropus_vampyrus
ENSATEG00000003864	csde1	100	92.718	ENSPNYG00000013745	csde1	100	92.718	Pundamilia_nyererei
ENSATEG00000003864	csde1	100	87.289	ENSPNAG00000001958	csde1	100	87.289	Pygocentrus_nattereri
ENSATEG00000003864	csde1	100	73.783	ENSRNOG00000061058	Csde1	100	73.783	Rattus_norvegicus
ENSATEG00000003864	csde1	100	73.022	ENSRBIG00000038966	-	94	72.927	Rhinopithecus_bieti
ENSATEG00000003864	csde1	100	74.449	ENSRBIG00000038088	-	100	74.449	Rhinopithecus_bieti
ENSATEG00000003864	csde1	100	77.403	ENSRROG00000043101	CSDE1	97	77.403	Rhinopithecus_roxellana
ENSATEG00000003864	csde1	100	77.273	ENSSBOG00000035592	CSDE1	95	77.273	Saimiri_boliviensis_boliviensis
ENSATEG00000003864	csde1	100	78.961	ENSSHAG00000009831	CSDE1	100	78.961	Sarcophilus_harrisii
ENSATEG00000003864	csde1	100	83.766	ENSSFOG00015007498	csde1	100	83.766	Scleropages_formosus
ENSATEG00000003864	csde1	100	93.758	ENSSMAG00000007203	csde1	100	93.758	Scophthalmus_maximus
ENSATEG00000003864	csde1	100	95.059	ENSSDUG00000015380	csde1	100	95.059	Seriola_dumerili
ENSATEG00000003864	csde1	100	95.059	ENSSLDG00000008819	csde1	100	95.059	Seriola_lalandi_dorsalis
ENSATEG00000003864	csde1	100	77.013	ENSSARG00000000738	CSDE1	94	77.013	Sorex_araneus
ENSATEG00000003864	csde1	100	79.740	ENSSPUG00000008714	CSDE1	100	79.740	Sphenodon_punctatus
ENSATEG00000003864	csde1	100	94.278	ENSSPAG00000000716	csde1	100	94.278	Stegastes_partitus
ENSATEG00000003864	csde1	100	77.792	ENSSSCG00000006752	CSDE1	100	77.792	Sus_scrofa
ENSATEG00000003864	csde1	100	75.312	ENSTGUG00000000972	CSDE1	100	75.312	Taeniopygia_guttata
ENSATEG00000003864	csde1	100	86.996	ENSTRUG00000007996	csde1	100	86.996	Takifugu_rubripes
ENSATEG00000003864	csde1	93	85.057	ENSTNIG00000010878	csde1	100	85.057	Tetraodon_nigroviridis
ENSATEG00000003864	csde1	93	80.982	ENSTBEG00000011880	-	60	80.982	Tupaia_belangeri
ENSATEG00000003864	csde1	100	76.883	ENSTTRG00000015583	CSDE1	94	76.883	Tursiops_truncatus
ENSATEG00000003864	csde1	92	82.410	ENSUAMG00000021779	-	98	82.410	Ursus_americanus
ENSATEG00000003864	csde1	87	73.077	ENSUAMG00000024289	-	99	73.077	Ursus_americanus
ENSATEG00000003864	csde1	100	71.039	ENSUMAG00000009720	-	97	71.039	Ursus_maritimus
ENSATEG00000003864	csde1	86	72.512	ENSUMAG00000011714	-	99	72.512	Ursus_maritimus
ENSATEG00000003864	csde1	100	80.233	ENSVPAG00000000749	CSDE1	79	80.233	Vicugna_pacos
ENSATEG00000003864	csde1	93	72.926	ENSVVUG00000009890	CSDE1	94	72.926	Vulpes_vulpes
ENSATEG00000003864	csde1	100	75.498	ENSXETG00000021448	csde1	100	75.498	Xenopus_tropicalis
ENSATEG00000003864	csde1	94	95.425	ENSXCOG00000000035	csde1	89	95.425	Xiphophorus_couchianus
ENSATEG00000003864	csde1	98	91.379	ENSXMAG00000009080	csde1	98	91.379	Xiphophorus_maculatus