EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSATEG00000003959 (Gene tree)
Gene ID
113148884
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Anabas_testudineus
Status
putative
Strand
Minus strand
Length
5952 bases
Position
chrOOHO01000013.1:19118104-19124055
Accession
113148884
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSATEP00000005671CPSF73-100_CPF11718.83.8e-5211
ENSATEP00000005691CPSF73-100_CPF11718.82.1e-4711
ENSATEP00000005691Beta-CaspPF10996.88e-3411
ENSATEP00000005671Beta-CaspPF10996.89.9e-3411
ENSATEP00000005671Lactamase_BPF00753.273.3e-1811
ENSATEP00000005691Lactamase_BPF00753.278.2e-0811
ENSATEP00000005691RMMBLPF07521.121.6e-2111
ENSATEP00000005671RMMBLPF07521.121.8e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSATET00000005767-2197-ENSATEP00000005671686 (aa)XP_026196405UPI000E455656
ENSATET00000005789-1881-ENSATEP00000005691626 (aa)--
Gene Model
Click here to download ENSATEG00000003959's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000003959's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSATEG00000003959cpsf39984.470ENSATEG00000014525CPSF39984.470
ENSATEG00000003959cpsf36839.040ENSATEG00000024376ints117939.040
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSATEG00000003959cpsf39885.420ENSG00000119203CPSF310098.529Homo_sapiens
ENSATEG00000003959cpsf39995.760ENSAPOG00000022087cpsf39995.760Acanthochromis_polyacanthus
ENSATEG00000003959cpsf37496.267ENSAPOG00000012241CPSF39196.267Acanthochromis_polyacanthus
ENSATEG00000003959cpsf39885.567ENSAMEG00000008493CPSF39985.567Ailuropoda_melanoleuca
ENSATEG00000003959cpsf39991.746ENSACIG00000009846cpsf39991.746Amphilophus_citrinellus
ENSATEG00000003959cpsf39986.614ENSACIG00000023663CPSF39986.614Amphilophus_citrinellus
ENSATEG00000003959cpsf39988.663ENSAOCG00000010077CPSF39988.663Amphiprion_ocellaris
ENSATEG00000003959cpsf39995.468ENSAOCG00000022056cpsf39995.468Amphiprion_ocellaris
ENSATEG00000003959cpsf39988.663ENSAPEG00000021167CPSF39988.663Amphiprion_percula
ENSATEG00000003959cpsf39995.468ENSAPEG00000019526cpsf39995.738Amphiprion_percula
ENSATEG00000003959cpsf39983.121ENSAPLG00000006941CPSF39885.075Anas_platyrhynchos
ENSATEG00000003959cpsf39982.035ENSACAG00000001759CPSF39982.808Anolis_carolinensis
ENSATEG00000003959cpsf39880.412ENSANAG00000031254CPSF39980.781Aotus_nancymaae
ENSATEG00000003959cpsf39992.320ENSACLG00000014484cpsf39995.152Astatotilapia_calliptera
ENSATEG00000003959cpsf39986.457ENSACLG00000018846CPSF39986.804Astatotilapia_calliptera
ENSATEG00000003959cpsf39987.355ENSAMXG00000004786cpsf39987.355Astyanax_mexicanus
ENSATEG00000003959cpsf39885.567ENSBTAG00000019735CPSF39985.567Bos_taurus
ENSATEG00000003959cpsf39056.940WBGene00013460cpsf-38956.940Caenorhabditis_elegans
ENSATEG00000003959cpsf39885.272ENSCJAG00000006276CPSF39985.272Callithrix_jacchus
ENSATEG00000003959cpsf39885.567ENSCAFG00000003375CPSF39585.567Canis_familiaris
ENSATEG00000003959cpsf39087.844ENSCAFG00020026799CPSF39987.844Canis_lupus_dingo
ENSATEG00000003959cpsf39885.567ENSCHIG00000013973CPSF39985.567Capra_hircus
ENSATEG00000003959cpsf39885.420ENSTSYG00000002967CPSF39985.420Carlito_syrichta
ENSATEG00000003959cpsf39983.439ENSCAPG00000013851CPSF39985.865Cavia_aperea
ENSATEG00000003959cpsf39886.009ENSCPOG00000011299CPSF39986.009Cavia_porcellus
ENSATEG00000003959cpsf39885.272ENSCCAG00000036730CPSF39985.272Cebus_capucinus
ENSATEG00000003959cpsf39883.529ENSCATG00000014770CPSF39991.192Cercocebus_atys
ENSATEG00000003959cpsf39886.009ENSCLAG00000002727CPSF39986.009Chinchilla_lanigera
ENSATEG00000003959cpsf39877.467ENSCSAG00000007125CPSF39977.467Chlorocebus_sabaeus
ENSATEG00000003959cpsf385100.000ENSCHOG00000000180CPSF38561.160Choloepus_hoffmanni
ENSATEG00000003959cpsf39985.196ENSCPBG00000014074CPSF39985.196Chrysemys_picta_bellii
ENSATEG00000003959cpsf39867.742ENSCING00000007214-9767.742Ciona_intestinalis
ENSATEG00000003959cpsf39876.170ENSCANG00000034435CPSF39976.170Colobus_angolensis_palliatus
ENSATEG00000003959cpsf39885.147ENSCGRG00001013134Cpsf39985.147Cricetulus_griseus_chok1gshd
ENSATEG00000003959cpsf39885.147ENSCGRG00000018319Cpsf39985.147Cricetulus_griseus_crigri
ENSATEG00000003959cpsf39987.228ENSCSEG00000002021CPSF39987.287Cynoglossus_semilaevis
ENSATEG00000003959cpsf39987.936ENSCVAG00000015067CPSF39987.936Cyprinodon_variegatus
ENSATEG00000003959cpsf39986.919ENSDARG00000027649cpsf39986.919Danio_rerio
ENSATEG00000003959cpsf39884.581ENSDNOG00000008940CPSF39584.581Dasypus_novemcinctus
ENSATEG00000003959cpsf39486.574ENSDORG00000014263Cpsf39986.574Dipodomys_ordii
ENSATEG00000003959cpsf39967.305FBgn0261065Cpsf739967.305Drosophila_melanogaster
ENSATEG00000003959cpsf39474.372ENSETEG00000003893CPSF39974.228Echinops_telfairi
ENSATEG00000003959cpsf39974.471ENSEBUG00000009018cpsf39974.471Eptatretus_burgeri
ENSATEG00000003959cpsf39885.567ENSEASG00005003970CPSF39985.567Equus_asinus_asinus
ENSATEG00000003959cpsf39885.567ENSECAG00000019911CPSF39690.878Equus_caballus
ENSATEG00000003959cpsf39971.072ENSEEUG00000015422CPSF39971.072Erinaceus_europaeus
ENSATEG00000003959cpsf39990.698ENSELUG00000013775cpsf39990.698Esox_lucius
ENSATEG00000003959cpsf39885.567ENSFCAG00000007852CPSF39985.567Felis_catus
ENSATEG00000003959cpsf39983.280ENSFALG00000006572CPSF39985.116Ficedula_albicollis
ENSATEG00000003959cpsf39885.420ENSFDAG00000006317CPSF39985.420Fukomys_damarensis
ENSATEG00000003959cpsf39992.544ENSFHEG00000014774cpsf39992.544Fundulus_heteroclitus
ENSATEG00000003959cpsf36367.157ENSFHEG00000012186CPSF39968.382Fundulus_heteroclitus
ENSATEG00000003959cpsf39989.971ENSGMOG00000003157cpsf39989.971Gadus_morhua
ENSATEG00000003959cpsf39985.153ENSGALG00000016424CPSF39985.153Gallus_gallus
ENSATEG00000003959cpsf39989.841ENSGAFG00000019449cpsf39989.841Gambusia_affinis
ENSATEG00000003959cpsf39988.227ENSGAFG00000008016CPSF39988.227Gambusia_affinis
ENSATEG00000003959cpsf37380.514ENSGAGG00000025583CPSF39380.728Gopherus_agassizii
ENSATEG00000003959cpsf39983.121ENSGGOG00000001757CPSF39196.774Gorilla_gorilla
ENSATEG00000003959cpsf36381.750ENSHBUG00000014332CPSF39981.750Haplochromis_burtoni
ENSATEG00000003959cpsf39995.029ENSHBUG00000001188cpsf39995.029Haplochromis_burtoni
ENSATEG00000003959cpsf39886.009ENSHGLG00000000666CPSF39886.009Heterocephalus_glaber_female
ENSATEG00000003959cpsf39886.009ENSHGLG00100007765CPSF39886.009Heterocephalus_glaber_male
ENSATEG00000003959cpsf39987.500ENSHCOG00000015957CPSF39987.500Hippocampus_comes
ENSATEG00000003959cpsf39991.667ENSHCOG00000007251cpsf39991.667Hippocampus_comes
ENSATEG00000003959cpsf39987.936ENSIPUG00000023488cpsf39987.936Ictalurus_punctatus
ENSATEG00000003959cpsf39885.272ENSSTOG00000004476CPSF39985.272Ictidomys_tridecemlineatus
ENSATEG00000003959cpsf39885.147ENSJJAG00000023415Cpsf39985.147Jaculus_jaculus
ENSATEG00000003959cpsf39993.567ENSKMAG00000002806cpsf39993.567Kryptolebias_marmoratus
ENSATEG00000003959cpsf39987.645ENSKMAG00000007317CPSF39987.645Kryptolebias_marmoratus
ENSATEG00000003959cpsf35888.710ENSLBEG00000015018-9990.591Labrus_bergylta
ENSATEG00000003959cpsf39689.193ENSLBEG00000013492CPSF39989.193Labrus_bergylta
ENSATEG00000003959cpsf310086.297ENSLBEG00000020569cpsf39686.297Labrus_bergylta
ENSATEG00000003959cpsf39979.681ENSLACG00000008308CPSF39979.681Latimeria_chalumnae
ENSATEG00000003959cpsf39987.699ENSLOCG00000016823cpsf39987.699Lepisosteus_oculatus
ENSATEG00000003959cpsf39884.242ENSLAFG00000009467CPSF39984.242Loxodonta_africana
ENSATEG00000003959cpsf39885.272ENSMFAG00000001339CPSF39493.763Macaca_fascicularis
ENSATEG00000003959cpsf39982.962ENSMMUG00000018038CPSF39293.763Macaca_mulatta
ENSATEG00000003959cpsf39096.800ENSMNEG00000039447CPSF39996.800Macaca_nemestrina
ENSATEG00000003959cpsf39885.420ENSMLEG00000026825CPSF39296.360Mandrillus_leucophaeus
ENSATEG00000003959cpsf39995.474ENSMAMG00000003076cpsf39995.474Mastacembelus_armatus
ENSATEG00000003959cpsf39987.322ENSMAMG00000008835CPSF39987.322Mastacembelus_armatus
ENSATEG00000003959cpsf39995.029ENSMZEG00005014358cpsf39995.029Maylandia_zebra
ENSATEG00000003959cpsf39988.663ENSMZEG00005006258CPSF39988.663Maylandia_zebra
ENSATEG00000003959cpsf39982.643ENSMGAG00000013995CPSF39985.414Meleagris_gallopavo
ENSATEG00000003959cpsf35875.134ENSMAUG00000000166Cpsf39975.134Mesocricetus_auratus
ENSATEG00000003959cpsf39880.764ENSMICG00000002363CPSF39980.764Microcebus_murinus
ENSATEG00000003959cpsf39982.570ENSMOCG00000020067Cpsf39982.570Microtus_ochrogaster
ENSATEG00000003959cpsf39986.107ENSMMOG00000018212CPSF39886.760Mola_mola
ENSATEG00000003959cpsf37878.369ENSMMOG00000011923CPSF38578.369Mola_mola
ENSATEG00000003959cpsf39883.843ENSMODG00000014703CPSF39983.843Monodelphis_domestica
ENSATEG00000003959cpsf39684.704ENSMALG00000011474CPSF39984.409Monopterus_albus
ENSATEG00000003959cpsf39996.058ENSMALG00000016416cpsf39996.058Monopterus_albus
ENSATEG00000003959cpsf39885.147MGP_CAROLIEiJ_G0017640Cpsf39985.147Mus_caroli
ENSATEG00000003959cpsf39885.147ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSATEG00000003959cpsf39885.000MGP_PahariEiJ_G0029397Cpsf39985.000Mus_pahari
ENSATEG00000003959cpsf39885.147MGP_SPRETEiJ_G0018481Cpsf39985.147Mus_spretus
ENSATEG00000003959cpsf39885.567ENSMPUG00000013213CPSF39985.567Mustela_putorius_furo
ENSATEG00000003959cpsf39885.169ENSMLUG00000010636CPSF39985.169Myotis_lucifugus
ENSATEG00000003959cpsf39885.147ENSNGAG00000019836Cpsf39985.147Nannospalax_galili
ENSATEG00000003959cpsf39994.591ENSNBRG00000004770cpsf39994.591Neolamprologus_brichardi
ENSATEG00000003959cpsf39986.457ENSNBRG00000010525CPSF39986.804Neolamprologus_brichardi
ENSATEG00000003959cpsf39885.272ENSNLEG00000013359CPSF39196.567Nomascus_leucogenys
ENSATEG00000003959cpsf39854.934ENSMEUG00000013117-9954.934Notamacropus_eugenii
ENSATEG00000003959cpsf39876.912ENSOPRG00000008902CPSF39976.912Ochotona_princeps
ENSATEG00000003959cpsf39886.156ENSODEG00000003129CPSF39986.156Octodon_degus
ENSATEG00000003959cpsf39995.029ENSONIG00000018812cpsf39995.029Oreochromis_niloticus
ENSATEG00000003959cpsf38882.918ENSOANG00000008577CPSF39982.918Ornithorhynchus_anatinus
ENSATEG00000003959cpsf39885.567ENSOCUG00000003728CPSF39985.567Oryctolagus_cuniculus
ENSATEG00000003959cpsf39991.959ENSORLG00000018854cpsf39991.959Oryzias_latipes
ENSATEG00000003959cpsf39991.813ENSORLG00020013331cpsf39991.813Oryzias_latipes_hni
ENSATEG00000003959cpsf39991.959ENSORLG00015011017cpsf39991.959Oryzias_latipes_hsok
ENSATEG00000003959cpsf39992.398ENSOMEG00000010647cpsf39592.398Oryzias_melastigma
ENSATEG00000003959cpsf39975.477ENSOGAG00000001680CPSF39975.477Otolemur_garnettii
ENSATEG00000003959cpsf39885.567ENSOARG00000015073CPSF39985.567Ovis_aries
ENSATEG00000003959cpsf39885.420ENSPPAG00000042457CPSF39196.774Pan_paniscus
ENSATEG00000003959cpsf39885.567ENSPPRG00000016790CPSF39985.714Panthera_pardus
ENSATEG00000003959cpsf39885.693ENSPTIG00000003920CPSF39985.841Panthera_tigris_altaica
ENSATEG00000003959cpsf39885.420ENSPTRG00000011638CPSF39196.567Pan_troglodytes
ENSATEG00000003959cpsf39885.420ENSPANG00000016798CPSF39493.763Papio_anubis
ENSATEG00000003959cpsf39988.953ENSPKIG00000023646cpsf39988.953Paramormyrops_kingsleyae
ENSATEG00000003959cpsf39884.435ENSPSIG00000016144CPSF39984.435Pelodiscus_sinensis
ENSATEG00000003959cpsf39987.500ENSPMGG00000006141-9987.500Periophthalmus_magnuspinnatus
ENSATEG00000003959cpsf36379.449ENSPMGG00000015311CPSF39979.901Periophthalmus_magnuspinnatus
ENSATEG00000003959cpsf39885.272ENSPEMG00000017668Cpsf39985.420Peromyscus_maniculatus_bairdii
ENSATEG00000003959cpsf37988.950ENSPMAG00000004841cpsf39988.950Petromyzon_marinus
ENSATEG00000003959cpsf39982.512ENSPCIG00000009823CPSF39885.583Phascolarctos_cinereus
ENSATEG00000003959cpsf39987.936ENSPFOG00000010418-9987.936Poecilia_formosa
ENSATEG00000003959cpsf39992.836ENSPFOG00000015922cpsf39992.836Poecilia_formosa
ENSATEG00000003959cpsf39992.836ENSPLAG00000000882cpsf39992.836Poecilia_latipinna
ENSATEG00000003959cpsf36380.397ENSPLAG00000021300-9981.886Poecilia_latipinna
ENSATEG00000003959cpsf39992.836ENSPMEG00000018309cpsf39992.836Poecilia_mexicana
ENSATEG00000003959cpsf39982.583ENSPREG00000004482CPSF39982.583Poecilia_reticulata
ENSATEG00000003959cpsf39990.400ENSPREG00000014875cpsf39990.400Poecilia_reticulata
ENSATEG00000003959cpsf39881.149ENSPPYG00000012666CPSF39981.149Pongo_abelii
ENSATEG00000003959cpsf38464.906ENSPCAG00000015042CPSF38864.906Procavia_capensis
ENSATEG00000003959cpsf38886.159ENSPCOG00000023016CPSF39986.159Propithecus_coquereli
ENSATEG00000003959cpsf39985.316ENSPVAG00000005324CPSF39985.316Pteropus_vampyrus
ENSATEG00000003959cpsf39995.029ENSPNYG00000004405cpsf39995.029Pundamilia_nyererei
ENSATEG00000003959cpsf38991.219ENSPNYG00000021047CPSF39391.219Pundamilia_nyererei
ENSATEG00000003959cpsf39987.791ENSPNAG00000023060cpsf39987.791Pygocentrus_nattereri
ENSATEG00000003959cpsf39885.147ENSRNOG00000052418Cpsf39985.147Rattus_norvegicus
ENSATEG00000003959cpsf39979.618ENSRBIG00000041615CPSF39981.240Rhinopithecus_bieti
ENSATEG00000003959cpsf39885.420ENSRROG00000033792CPSF39985.420Rhinopithecus_roxellana
ENSATEG00000003959cpsf39739.300YLR277CYSH19839.300Saccharomyces_cerevisiae
ENSATEG00000003959cpsf39979.140ENSSBOG00000027263CPSF39781.504Saimiri_boliviensis_boliviensis
ENSATEG00000003959cpsf39885.125ENSSHAG00000007024CPSF39985.125Sarcophilus_harrisii
ENSATEG00000003959cpsf39988.808ENSSFOG00015002108cpsf39988.808Scleropages_formosus
ENSATEG00000003959cpsf39688.584ENSSMAG00000020534CPSF39788.584Scophthalmus_maximus
ENSATEG00000003959cpsf39995.760ENSSDUG00000002828cpsf39795.760Seriola_dumerili
ENSATEG00000003959cpsf39988.663ENSSDUG00000018498CPSF39988.663Seriola_dumerili
ENSATEG00000003959cpsf39988.663ENSSLDG00000005234CPSF39988.663Seriola_lalandi_dorsalis
ENSATEG00000003959cpsf39995.468ENSSLDG00000008469cpsf39795.468Seriola_lalandi_dorsalis
ENSATEG00000003959cpsf38883.239ENSSARG00000005186CPSF38883.239Sorex_araneus
ENSATEG00000003959cpsf39981.833ENSSPUG00000015525CPSF39784.179Sphenodon_punctatus
ENSATEG00000003959cpsf39988.517ENSSPAG00000002906CPSF39988.517Stegastes_partitus
ENSATEG00000003959cpsf39995.175ENSSPAG00000018579cpsf39995.175Stegastes_partitus
ENSATEG00000003959cpsf39885.567ENSSSCG00000020799CPSF39985.567Sus_scrofa
ENSATEG00000003959cpsf39885.567ENSTGUG00000013016CPSF39985.567Taeniopygia_guttata
ENSATEG00000003959cpsf36373.869ENSTRUG00000013905CPSF39973.869Takifugu_rubripes
ENSATEG00000003959cpsf39993.285ENSTRUG00000007030cpsf39893.285Takifugu_rubripes
ENSATEG00000003959cpsf38490.358ENSTBEG00000002707CPSF38490.358Tupaia_belangeri
ENSATEG00000003959cpsf38673.236ENSTTRG00000000861CPSF38773.236Tursiops_truncatus
ENSATEG00000003959cpsf39685.866ENSUAMG00000007535CPSF39585.866Ursus_americanus
ENSATEG00000003959cpsf39983.280ENSUMAG00000003676CPSF39490.502Ursus_maritimus
ENSATEG00000003959cpsf39285.962ENSVPAG00000008041CPSF310085.962Vicugna_pacos
ENSATEG00000003959cpsf39885.567ENSVVUG00000002194CPSF39985.567Vulpes_vulpes
ENSATEG00000003959cpsf39984.203ENSXETG00000008263cpsf39984.203Xenopus_tropicalis
ENSATEG00000003959cpsf39992.251ENSXCOG00000019695cpsf39992.251Xiphophorus_couchianus
ENSATEG00000003959cpsf35878.919ENSXCOG00000000957-8780.541Xiphophorus_couchianus
ENSATEG00000003959cpsf39988.081ENSXMAG00000027291CPSF39988.081Xiphophorus_maculatus
ENSATEG00000003959cpsf39992.836ENSXMAG00000009784cpsf39992.836Xiphophorus_maculatus

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