EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000004134 (Gene tree)
Gene ID: 113164732
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 15920 bases
Position: chrOOHO01000004.1:11144622-11160541
Accession: 113164732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000005849	RNase_Zc3h12a	PF11977.8	1.7e-65	1	1
ENSATEP00000005857	RNase_Zc3h12a	PF11977.8	1.7e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000005948	-	5970	XM_026364170	ENSATEP00000005849	964 (aa)	XP_026219955	UPI000E456F78
ENSATET00000005956	-	6013	XM_026364172	ENSATEP00000005857	964 (aa)	XP_026219957	UPI000E456F78

Gene Model

Click here to download ENSATEG00000004134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000004134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000004134	-	85	45.403	ENSATEG00000002260	-	89	75.294
ENSATEG00000004134	-	89	42.668	ENSATEG00000011175	zc3h12b	66	62.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000004134	-	79	87.337	ENSAPOG00000015355	-	83	86.292	Acanthochromis_polyacanthus
ENSATEG00000004134	-	83	47.841	ENSAPOG00000001632	-	97	58.522	Acanthochromis_polyacanthus
ENSATEG00000004134	-	100	71.473	ENSACIG00000001362	-	97	72.400	Amphilophus_citrinellus
ENSATEG00000004134	-	99	86.200	ENSAOCG00000003866	-	97	89.219	Amphiprion_ocellaris
ENSATEG00000004134	-	100	79.300	ENSAPEG00000005727	-	99	87.469	Amphiprion_percula
ENSATEG00000004134	-	72	81.662	ENSAPEG00000018582	-	100	86.496	Amphiprion_percula
ENSATEG00000004134	-	64	53.981	ENSACLG00000018493	-	99	44.653	Astatotilapia_calliptera
ENSATEG00000004134	-	100	83.864	ENSACLG00000027924	-	100	84.173	Astatotilapia_calliptera
ENSATEG00000004134	-	86	80.079	ENSCSEG00000010073	-	96	84.912	Cynoglossus_semilaevis
ENSATEG00000004134	-	100	76.477	ENSCVAG00000002328	-	100	75.129	Cyprinodon_variegatus
ENSATEG00000004134	-	83	57.301	ENSELUG00000009319	-	95	55.961	Esox_lucius
ENSATEG00000004134	-	91	87.500	ENSFHEG00000021225	-	100	87.500	Fundulus_heteroclitus
ENSATEG00000004134	-	72	46.034	ENSGMOG00000017975	-	100	45.969	Gadus_morhua
ENSATEG00000004134	-	100	74.665	ENSGAFG00000005290	-	100	73.841	Gambusia_affinis
ENSATEG00000004134	-	72	46.535	ENSGACG00000001339	-	99	45.545	Gasterosteus_aculeatus
ENSATEG00000004134	-	67	81.100	ENSGACG00000014201	-	100	80.928	Gasterosteus_aculeatus
ENSATEG00000004134	-	100	83.556	ENSHBUG00000006831	-	100	83.864	Haplochromis_burtoni
ENSATEG00000004134	-	100	66.234	ENSHCOG00000008878	-	99	87.755	Hippocampus_comes
ENSATEG00000004134	-	100	78.675	ENSKMAG00000011694	-	100	79.051	Kryptolebias_marmoratus
ENSATEG00000004134	-	100	83.436	ENSLBEG00000003547	-	100	82.924	Labrus_bergylta
ENSATEG00000004134	-	87	46.916	ENSLBEG00000012710	-	67	55.418	Labrus_bergylta
ENSATEG00000004134	-	97	82.979	ENSLBEG00000012554	-	99	86.859	Labrus_bergylta
ENSATEG00000004134	-	97	82.660	ENSMAMG00000021794	-	97	90.706	Mastacembelus_armatus
ENSATEG00000004134	-	99	45.309	ENSMAMG00000020372	-	99	44.797	Mastacembelus_armatus
ENSATEG00000004134	-	64	53.981	ENSMZEG00005019137	-	90	69.677	Maylandia_zebra
ENSATEG00000004134	-	100	83.762	ENSMZEG00005007718	-	100	84.070	Maylandia_zebra
ENSATEG00000004134	-	82	48.426	ENSMMOG00000019526	-	93	43.676	Mola_mola
ENSATEG00000004134	-	96	78.078	ENSMMOG00000005728	-	99	84.398	Mola_mola
ENSATEG00000004134	-	100	85.507	ENSMALG00000010501	-	100	85.921	Monopterus_albus
ENSATEG00000004134	-	100	83.659	ENSNBRG00000006978	-	100	83.967	Neolamprologus_brichardi
ENSATEG00000004134	-	64	51.994	ENSNBRG00000012175	-	90	69.677	Neolamprologus_brichardi
ENSATEG00000004134	-	100	83.590	ENSONIG00000012268	-	100	88.235	Oreochromis_niloticus
ENSATEG00000004134	-	97	71.345	ENSORLG00000029243	-	98	79.323	Oryzias_latipes
ENSATEG00000004134	-	100	75.413	ENSORLG00020017005	-	100	75.542	Oryzias_latipes_hni
ENSATEG00000004134	-	100	75.207	ENSORLG00015015211	-	100	74.616	Oryzias_latipes_hsok
ENSATEG00000004134	-	100	75.000	ENSOMEG00000006666	-	100	75.334	Oryzias_melastigma
ENSATEG00000004134	-	50	59.259	ENSPMGG00000020126	-	50	59.615	Periophthalmus_magnuspinnatus
ENSATEG00000004134	-	64	80.063	ENSPMGG00000009790	-	98	79.430	Periophthalmus_magnuspinnatus
ENSATEG00000004134	-	100	76.780	ENSPLAG00000009867	-	100	75.645	Poecilia_latipinna
ENSATEG00000004134	-	100	76.987	ENSPMEG00000006624	-	100	75.851	Poecilia_mexicana
ENSATEG00000004134	-	86	63.636	ENSPMEG00000011676	-	99	42.436	Poecilia_mexicana
ENSATEG00000004134	-	100	76.883	ENSPREG00000010838	-	100	75.748	Poecilia_reticulata
ENSATEG00000004134	-	82	47.741	ENSPREG00000001607	-	73	78.947	Poecilia_reticulata
ENSATEG00000004134	-	100	85.891	ENSSMAG00000007545	-	100	85.273	Scophthalmus_maximus
ENSATEG00000004134	-	84	49.479	ENSSMAG00000007258	-	99	45.323	Scophthalmus_maximus
ENSATEG00000004134	-	83	50.239	ENSSDUG00000013237	-	90	66.225	Seriola_dumerili
ENSATEG00000004134	-	100	88.730	ENSSDUG00000021864	-	100	88.422	Seriola_dumerili
ENSATEG00000004134	-	85	49.472	ENSSLDG00000004886	-	99	46.516	Seriola_lalandi_dorsalis
ENSATEG00000004134	-	100	88.934	ENSSLDG00000012268	-	100	88.525	Seriola_lalandi_dorsalis
ENSATEG00000004134	-	100	87.179	ENSSPAG00000009485	-	100	87.179	Stegastes_partitus
ENSATEG00000004134	-	99	45.050	ENSSPAG00000001850	-	99	45.935	Stegastes_partitus
ENSATEG00000004134	-	99	76.923	ENSTRUG00000022519	-	99	77.963	Takifugu_rubripes
ENSATEG00000004134	-	62	76.923	ENSTNIG00000014519	-	97	90.244	Tetraodon_nigroviridis
ENSATEG00000004134	-	100	76.161	ENSXMAG00000027171	-	100	75.542	Xiphophorus_maculatus
ENSATEG00000004134	-	82	47.037	ENSXMAG00000014715	-	83	79.654	Xiphophorus_maculatus