EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000004307 (Gene tree)
Gene ID: 113159155
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 2939 bases
Position: chrOOHO01000019.1:17788007-17790945
Accession: 113159155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000006125	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000006226	-	1133	XM_026355702	ENSATEP00000006125	278 (aa)	XP_026211487	UPI000E45D264

Gene Model

Click here to download ENSATEG00000004307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000004307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000004307	alyref	100	54.965	ENSATEG00000000382	-	100	53.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000004307	alyref	100	52.482	ENSAPOG00000000183	-	100	52.482	Acanthochromis_polyacanthus
ENSATEG00000004307	alyref	100	52.069	ENSACIG00000020351	-	100	50.350	Amphilophus_citrinellus
ENSATEG00000004307	alyref	99	80.727	ENSACIG00000006351	alyref	98	79.422	Amphilophus_citrinellus
ENSATEG00000004307	alyref	100	82.374	ENSAOCG00000014012	alyref	100	79.496	Amphiprion_ocellaris
ENSATEG00000004307	alyref	100	50.177	ENSAOCG00000019305	-	100	51.418	Amphiprion_ocellaris
ENSATEG00000004307	alyref	100	51.943	ENSAPEG00000013527	-	100	51.418	Amphiprion_percula
ENSATEG00000004307	alyref	100	82.374	ENSAPEG00000014603	alyref	100	79.496	Amphiprion_percula
ENSATEG00000004307	alyref	51	69.863	ENSAPLG00000014745	-	100	67.361	Anas_platyrhynchos
ENSATEG00000004307	alyref	100	53.333	ENSACLG00000010184	-	100	52.098	Astatotilapia_calliptera
ENSATEG00000004307	alyref	100	82.014	ENSACLG00000008432	alyref	100	78.058	Astatotilapia_calliptera
ENSATEG00000004307	alyref	100	72.887	ENSAMXG00000007359	alyref	100	70.775	Astyanax_mexicanus
ENSATEG00000004307	alyref	99	46.263	ENSCING00000013568	-	99	42.907	Ciona_intestinalis
ENSATEG00000004307	alyref	99	45.583	ENSCSAVG00000003324	-	99	43.728	Ciona_savignyi
ENSATEG00000004307	alyref	100	80.576	ENSCSEG00000017800	alyref	100	74.460	Cynoglossus_semilaevis
ENSATEG00000004307	alyref	100	82.374	ENSCVAG00000014869	alyref	100	79.856	Cyprinodon_variegatus
ENSATEG00000004307	alyref	100	46.786	ENSCVAG00000007789	-	75	49.510	Cyprinodon_variegatus
ENSATEG00000004307	alyref	100	78.322	ENSDARG00000077732	alyref	100	70.629	Danio_rerio
ENSATEG00000004307	alyref	99	49.818	ENSEBUG00000008253	alyref	95	47.273	Eptatretus_burgeri
ENSATEG00000004307	alyref	72	42.308	ENSEBUG00000006305	alyref	100	39.373	Eptatretus_burgeri
ENSATEG00000004307	alyref	100	75.269	ENSELUG00000017178	alyref	100	73.665	Esox_lucius
ENSATEG00000004307	alyref	100	66.784	ENSELUG00000008849	-	100	63.701	Esox_lucius
ENSATEG00000004307	alyref	59	76.220	ENSFALG00000011923	-	96	70.000	Ficedula_albicollis
ENSATEG00000004307	alyref	100	45.552	ENSFHEG00000004698	-	74	50.495	Fundulus_heteroclitus
ENSATEG00000004307	alyref	100	79.496	ENSFHEG00000019426	alyref	100	79.137	Fundulus_heteroclitus
ENSATEG00000004307	alyref	69	59.375	ENSGMOG00000013122	-	100	58.854	Gadus_morhua
ENSATEG00000004307	alyref	100	71.786	ENSGMOG00000009882	alyref	100	70.000	Gadus_morhua
ENSATEG00000004307	alyref	100	47.143	ENSGAFG00000007573	-	76	49.505	Gambusia_affinis
ENSATEG00000004307	alyref	100	79.286	ENSGAFG00000006014	alyref	100	76.786	Gambusia_affinis
ENSATEG00000004307	alyref	100	56.491	ENSHBUG00000001454	-	100	53.846	Haplochromis_burtoni
ENSATEG00000004307	alyref	100	82.014	ENSHBUG00000020196	alyref	100	78.058	Haplochromis_burtoni
ENSATEG00000004307	alyref	98	49.091	ENSHCOG00000012825	-	94	46.182	Hippocampus_comes
ENSATEG00000004307	alyref	100	75.532	ENSIPUG00000009469	alyref	100	73.050	Ictalurus_punctatus
ENSATEG00000004307	alyref	74	63.285	ENSSTOG00000016570	-	92	60.714	Ictidomys_tridecemlineatus
ENSATEG00000004307	alyref	100	82.437	ENSKMAG00000008912	alyref	100	76.344	Kryptolebias_marmoratus
ENSATEG00000004307	alyref	100	50.890	ENSKMAG00000006462	-	100	49.110	Kryptolebias_marmoratus
ENSATEG00000004307	alyref	100	49.653	ENSLBEG00000005387	-	66	55.000	Labrus_bergylta
ENSATEG00000004307	alyref	99	46.763	ENSLBEG00000012930	-	99	46.595	Labrus_bergylta
ENSATEG00000004307	alyref	100	81.851	ENSLBEG00000023118	alyref	90	76.512	Labrus_bergylta
ENSATEG00000004307	alyref	78	70.000	ENSLOCG00000013879	alyref	89	67.273	Lepisosteus_oculatus
ENSATEG00000004307	alyref	100	50.709	ENSMAMG00000005464	-	100	49.645	Mastacembelus_armatus
ENSATEG00000004307	alyref	100	83.813	ENSMAMG00000003034	alyref	100	80.216	Mastacembelus_armatus
ENSATEG00000004307	alyref	100	52.632	ENSMZEG00005012096	-	100	51.748	Maylandia_zebra
ENSATEG00000004307	alyref	100	82.014	ENSMZEG00005008639	alyref	100	78.058	Maylandia_zebra
ENSATEG00000004307	alyref	99	82.909	ENSMMOG00000012458	alyref	97	75.180	Mola_mola
ENSATEG00000004307	alyref	99	46.570	ENSMMOG00000007032	-	73	51.759	Mola_mola
ENSATEG00000004307	alyref	100	52.595	ENSMALG00000006054	-	100	49.645	Monopterus_albus
ENSATEG00000004307	alyref	98	56.000	ENSMLUG00000022178	-	98	52.364	Myotis_lucifugus
ENSATEG00000004307	alyref	100	57.241	ENSMLUG00000006521	-	100	55.052	Myotis_lucifugus
ENSATEG00000004307	alyref	98	55.282	ENSMLUG00000022467	-	98	54.122	Myotis_lucifugus
ENSATEG00000004307	alyref	100	58.537	ENSMLUG00000004098	-	100	55.052	Myotis_lucifugus
ENSATEG00000004307	alyref	98	55.311	ENSMLUG00000009247	-	98	53.480	Myotis_lucifugus
ENSATEG00000004307	alyref	98	53.546	ENSMLUG00000028605	-	98	52.837	Myotis_lucifugus
ENSATEG00000004307	alyref	100	57.388	ENSMLUG00000014372	-	100	54.355	Myotis_lucifugus
ENSATEG00000004307	alyref	98	55.714	ENSMLUG00000030671	-	99	52.113	Myotis_lucifugus
ENSATEG00000004307	alyref	100	66.906	ENSNGAG00000022014	-	100	61.511	Nannospalax_galili
ENSATEG00000004307	alyref	100	54.225	ENSNBRG00000017460	-	100	52.817	Neolamprologus_brichardi
ENSATEG00000004307	alyref	100	85.612	ENSNBRG00000001747	alyref	100	82.734	Neolamprologus_brichardi
ENSATEG00000004307	alyref	100	86.331	ENSONIG00000019434	alyref	100	86.331	Oreochromis_niloticus
ENSATEG00000004307	alyref	100	57.092	ENSONIG00000003296	-	100	54.610	Oreochromis_niloticus
ENSATEG00000004307	alyref	99	41.325	ENSORLG00000001620	-	58	48.598	Oryzias_latipes
ENSATEG00000004307	alyref	100	84.173	ENSORLG00020011942	alyref	100	79.496	Oryzias_latipes_hni
ENSATEG00000004307	alyref	99	49.104	ENSORLG00020015673	-	99	47.687	Oryzias_latipes_hni
ENSATEG00000004307	alyref	100	87.410	ENSORLG00015022664	alyref	100	76.978	Oryzias_latipes_hsok
ENSATEG00000004307	alyref	99	49.466	ENSORLG00015015143	-	99	48.043	Oryzias_latipes_hsok
ENSATEG00000004307	alyref	100	81.655	ENSOMEG00000019176	alyref	100	76.978	Oryzias_melastigma
ENSATEG00000004307	alyref	99	48.551	ENSOMEG00000007158	-	97	45.126	Oryzias_melastigma
ENSATEG00000004307	alyref	71	76.142	ENSPPAG00000036403	-	68	68.394	Pan_paniscus
ENSATEG00000004307	alyref	100	75.269	ENSPKIG00000007070	alyref	100	72.043	Paramormyrops_kingsleyae
ENSATEG00000004307	alyref	99	73.118	ENSPKIG00000006233	-	81	65.591	Paramormyrops_kingsleyae
ENSATEG00000004307	alyref	71	48.223	ENSPMGG00000012994	-	97	45.685	Periophthalmus_magnuspinnatus
ENSATEG00000004307	alyref	99	78.545	ENSPMGG00000016600	alyref	91	77.338	Periophthalmus_magnuspinnatus
ENSATEG00000004307	alyref	100	62.590	ENSPEMG00000016628	-	100	58.633	Peromyscus_maniculatus_bairdii
ENSATEG00000004307	alyref	100	45.965	ENSPFOG00000017094	-	75	48.515	Poecilia_formosa
ENSATEG00000004307	alyref	100	79.004	ENSPFOG00000022825	alyref	99	76.157	Poecilia_formosa
ENSATEG00000004307	alyref	100	79.286	ENSPLAG00000006948	alyref	100	76.429	Poecilia_latipinna
ENSATEG00000004307	alyref	100	45.965	ENSPLAG00000014380	-	75	48.515	Poecilia_latipinna
ENSATEG00000004307	alyref	100	45.965	ENSPMEG00000023039	-	75	48.515	Poecilia_mexicana
ENSATEG00000004307	alyref	100	79.004	ENSPMEG00000003547	alyref	100	76.157	Poecilia_mexicana
ENSATEG00000004307	alyref	100	77.143	ENSPREG00000015795	alyref	100	76.786	Poecilia_reticulata
ENSATEG00000004307	alyref	100	47.331	ENSPREG00000003649	-	74	50.246	Poecilia_reticulata
ENSATEG00000004307	alyref	99	51.601	ENSPNYG00000002879	-	98	51.064	Pundamilia_nyererei
ENSATEG00000004307	alyref	100	82.014	ENSPNYG00000017498	alyref	100	78.058	Pundamilia_nyererei
ENSATEG00000004307	alyref	100	78.929	ENSPNAG00000002531	alyref	100	68.571	Pygocentrus_nattereri
ENSATEG00000004307	alyref	73	74.877	ENSSBOG00000030924	-	87	67.327	Saimiri_boliviensis_boliviensis
ENSATEG00000004307	alyref	99	55.634	ENSSHAG00000000609	-	99	53.597	Sarcophilus_harrisii
ENSATEG00000004307	alyref	99	54.676	ENSSHAG00000012866	-	99	52.158	Sarcophilus_harrisii
ENSATEG00000004307	alyref	78	78.341	ENSSFOG00015003923	alyref	73	71.889	Scleropages_formosus
ENSATEG00000004307	alyref	70	73.846	ENSSFOG00015003678	alyref	83	67.692	Scleropages_formosus
ENSATEG00000004307	alyref	100	78.853	ENSSMAG00000009283	alyref	100	76.344	Scophthalmus_maximus
ENSATEG00000004307	alyref	100	50.352	ENSSMAG00000011169	-	100	54.726	Scophthalmus_maximus
ENSATEG00000004307	alyref	100	83.094	ENSSDUG00000016158	alyref	100	80.216	Seriola_dumerili
ENSATEG00000004307	alyref	100	82.374	ENSSLDG00000017803	alyref	100	79.856	Seriola_lalandi_dorsalis
ENSATEG00000004307	alyref	99	52.330	ENSSPAG00000017028	-	96	51.613	Stegastes_partitus
ENSATEG00000004307	alyref	100	51.399	ENSTRUG00000003051	-	100	49.286	Takifugu_rubripes
ENSATEG00000004307	alyref	100	50.178	ENSTNIG00000014136	-	100	44.484	Tetraodon_nigroviridis
ENSATEG00000004307	alyref	100	74.468	ENSTNIG00000011595	alyref	100	67.986	Tetraodon_nigroviridis
ENSATEG00000004307	alyref	71	77.665	ENSVVUG00000000272	-	82	69.898	Vulpes_vulpes
ENSATEG00000004307	alyref	99	78.339	ENSXCOG00000018047	alyref	99	75.000	Xiphophorus_couchianus
ENSATEG00000004307	alyref	99	78.339	ENSXMAG00000012218	alyref	99	75.000	Xiphophorus_maculatus
ENSATEG00000004307	alyref	100	46.996	ENSXMAG00000018086	-	76	50.000	Xiphophorus_maculatus