EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000004406 (Gene tree)
Gene ID: 113163794
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 8021 bases
Position: chrOOHO01000004.1:38440940-38448960
Accession: 113163794
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000006292	RRM_1	PF00076.22	3.6e-05	1	1
ENSATEP00000006269	RRM_1	PF00076.22	3.9e-05	1	1
ENSATEP00000006269	G-patch	PF01585.23	3.7e-13	1	1
ENSATEP00000006292	G-patch	PF01585.23	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000006372	-	1701	-	ENSATEP00000006269	421 (aa)	XP_026218548	UPI000E456FED
ENSATET00000006396	-	1203	-	ENSATEP00000006292	400 (aa)	-	-

Gene Model

Click here to download ENSATEG00000004406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000004406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000004406	rbm17	100	78.774	ENSG00000134453	RBM17	100	78.774	Homo_sapiens
ENSATEG00000004406	rbm17	99	94.964	ENSAPOG00000007101	rbm17	99	94.964	Acanthochromis_polyacanthus
ENSATEG00000004406	rbm17	100	79.009	ENSAMEG00000002107	RBM17	100	79.009	Ailuropoda_melanoleuca
ENSATEG00000004406	rbm17	100	87.678	ENSACIG00000006251	rbm17	100	88.998	Amphilophus_citrinellus
ENSATEG00000004406	rbm17	100	94.774	ENSAOCG00000014892	rbm17	100	94.774	Amphiprion_ocellaris
ENSATEG00000004406	rbm17	100	94.774	ENSAPEG00000022779	rbm17	100	94.774	Amphiprion_percula
ENSATEG00000004406	rbm17	100	80.189	ENSAPLG00000004190	RBM17	100	80.189	Anas_platyrhynchos
ENSATEG00000004406	rbm17	90	76.864	ENSACAG00000005418	RBM17	99	76.864	Anolis_carolinensis
ENSATEG00000004406	rbm17	100	69.100	ENSANAG00000019330	-	95	83.621	Aotus_nancymaae
ENSATEG00000004406	rbm17	100	79.245	ENSANAG00000030127	RBM17	97	85.833	Aotus_nancymaae
ENSATEG00000004406	rbm17	100	89.552	ENSACLG00000003928	rbm17	100	89.552	Astatotilapia_calliptera
ENSATEG00000004406	rbm17	100	84.634	ENSAMXG00000005853	rbm17	100	84.870	Astyanax_mexicanus
ENSATEG00000004406	rbm17	100	79.245	ENSBTAG00000021951	RBM17	100	79.245	Bos_taurus
ENSATEG00000004406	rbm17	100	78.066	ENSBTAG00000011094	-	100	78.066	Bos_taurus
ENSATEG00000004406	rbm17	86	31.217	WBGene00010233	F58B3.7	91	30.713	Caenorhabditis_elegans
ENSATEG00000004406	rbm17	100	79.245	ENSCJAG00000020573	RBM17	100	79.245	Callithrix_jacchus
ENSATEG00000004406	rbm17	100	79.009	ENSCAFG00000005206	RBM17	100	79.009	Canis_familiaris
ENSATEG00000004406	rbm17	100	79.156	ENSCAFG00020005420	RBM17	100	79.156	Canis_lupus_dingo
ENSATEG00000004406	rbm17	100	79.245	ENSCHIG00000023204	-	100	79.245	Capra_hircus
ENSATEG00000004406	rbm17	100	77.123	ENSCHIG00000019921	-	100	77.123	Capra_hircus
ENSATEG00000004406	rbm17	100	79.009	ENSTSYG00000001165	RBM17	99	86.441	Carlito_syrichta
ENSATEG00000004406	rbm17	96	63.566	ENSCAPG00000006275	RBM17	100	67.209	Cavia_aperea
ENSATEG00000004406	rbm17	100	76.108	ENSCPOG00000005679	RBM17	100	76.039	Cavia_porcellus
ENSATEG00000004406	rbm17	100	79.245	ENSCCAG00000018655	RBM17	97	85.833	Cebus_capucinus
ENSATEG00000004406	rbm17	100	78.774	ENSCATG00000041566	RBM17	97	85.833	Cercocebus_atys
ENSATEG00000004406	rbm17	100	79.009	ENSCLAG00000012195	RBM17	99	79.009	Chinchilla_lanigera
ENSATEG00000004406	rbm17	100	78.774	ENSCSAG00000013564	RBM17	100	78.774	Chlorocebus_sabaeus
ENSATEG00000004406	rbm17	93	62.087	ENSCHOG00000005131	RBM17	100	62.087	Choloepus_hoffmanni
ENSATEG00000004406	rbm17	100	79.245	ENSCPBG00000019836	RBM17	100	79.245	Chrysemys_picta_bellii
ENSATEG00000004406	rbm17	100	45.794	ENSCSAVG00000008782	-	100	44.941	Ciona_savignyi
ENSATEG00000004406	rbm17	100	78.538	ENSCANG00000030987	RBM17	97	85.833	Colobus_angolensis_palliatus
ENSATEG00000004406	rbm17	98	70.560	ENSCANG00000023715	-	99	70.560	Colobus_angolensis_palliatus
ENSATEG00000004406	rbm17	100	79.245	ENSCGRG00001013842	Rbm17	100	79.245	Cricetulus_griseus_chok1gshd
ENSATEG00000004406	rbm17	100	62.945	ENSCGRG00001009256	-	100	61.758	Cricetulus_griseus_chok1gshd
ENSATEG00000004406	rbm17	100	79.245	ENSCGRG00000006907	Rbm17	100	79.245	Cricetulus_griseus_crigri
ENSATEG00000004406	rbm17	100	86.493	ENSCSEG00000018164	rbm17	100	86.493	Cynoglossus_semilaevis
ENSATEG00000004406	rbm17	100	84.577	ENSCVAG00000002476	rbm17	100	85.075	Cyprinodon_variegatus
ENSATEG00000004406	rbm17	100	78.404	ENSDARG00000031346	rbm17	100	80.986	Danio_rerio
ENSATEG00000004406	rbm17	100	78.302	ENSDNOG00000035920	RBM17	100	78.302	Dasypus_novemcinctus
ENSATEG00000004406	rbm17	99	37.637	FBgn0086683	Spf45	99	36.748	Drosophila_melanogaster
ENSATEG00000004406	rbm17	86	82.938	ENSETEG00000006642	RBM17	86	82.938	Echinops_telfairi
ENSATEG00000004406	rbm17	63	66.667	ENSEBUG00000010253	rbm17	84	66.667	Eptatretus_burgeri
ENSATEG00000004406	rbm17	100	75.921	ENSEASG00005019205	-	100	75.921	Equus_asinus_asinus
ENSATEG00000004406	rbm17	93	76.336	ENSEASG00005009236	-	100	76.336	Equus_asinus_asinus
ENSATEG00000004406	rbm17	100	69.811	ENSECAG00000001379	-	100	69.811	Equus_caballus
ENSATEG00000004406	rbm17	100	69.479	ENSECAG00000008939	RBM17	100	70.223	Equus_caballus
ENSATEG00000004406	rbm17	86	62.943	ENSEEUG00000013077	RBM17	100	62.943	Erinaceus_europaeus
ENSATEG00000004406	rbm17	100	85.315	ENSELUG00000006440	rbm17	100	85.315	Esox_lucius
ENSATEG00000004406	rbm17	100	79.009	ENSFCAG00000031988	RBM17	100	79.009	Felis_catus
ENSATEG00000004406	rbm17	100	79.009	ENSFALG00000001790	RBM17	100	79.009	Ficedula_albicollis
ENSATEG00000004406	rbm17	100	79.009	ENSFDAG00000007470	RBM17	100	79.009	Fukomys_damarensis
ENSATEG00000004406	rbm17	100	91.211	ENSFHEG00000001266	rbm17	100	89.720	Fundulus_heteroclitus
ENSATEG00000004406	rbm17	99	82.857	ENSGMOG00000008438	rbm17	100	82.857	Gadus_morhua
ENSATEG00000004406	rbm17	100	79.953	ENSGALG00000006332	RBM17	100	79.953	Gallus_gallus
ENSATEG00000004406	rbm17	100	89.074	ENSGAFG00000019879	rbm17	100	89.074	Gambusia_affinis
ENSATEG00000004406	rbm17	99	90.261	ENSGACG00000019174	rbm17	99	90.261	Gasterosteus_aculeatus
ENSATEG00000004406	rbm17	100	79.245	ENSGAGG00000019906	RBM17	100	79.245	Gopherus_agassizii
ENSATEG00000004406	rbm17	100	93.112	ENSHBUG00000016624	rbm17	100	93.112	Haplochromis_burtoni
ENSATEG00000004406	rbm17	100	79.009	ENSHGLG00000011580	RBM17	100	79.009	Heterocephalus_glaber_female
ENSATEG00000004406	rbm17	100	79.009	ENSHGLG00100010460	RBM17	100	79.009	Heterocephalus_glaber_male
ENSATEG00000004406	rbm17	100	65.083	ENSHGLG00100010556	-	100	62.945	Heterocephalus_glaber_male
ENSATEG00000004406	rbm17	99	87.351	ENSHCOG00000010865	rbm17	100	87.351	Hippocampus_comes
ENSATEG00000004406	rbm17	100	81.647	ENSIPUG00000007699	Rbm17	100	83.059	Ictalurus_punctatus
ENSATEG00000004406	rbm17	100	79.245	ENSSTOG00000013591	RBM17	100	79.245	Ictidomys_tridecemlineatus
ENSATEG00000004406	rbm17	100	79.245	ENSJJAG00000022886	Rbm17	100	79.245	Jaculus_jaculus
ENSATEG00000004406	rbm17	100	58.255	ENSJJAG00000000993	-	100	56.808	Jaculus_jaculus
ENSATEG00000004406	rbm17	100	91.924	ENSKMAG00000021400	rbm17	100	91.924	Kryptolebias_marmoratus
ENSATEG00000004406	rbm17	100	91.686	ENSLBEG00000000881	rbm17	100	91.686	Labrus_bergylta
ENSATEG00000004406	rbm17	99	64.953	ENSLACG00000017297	RBM17	99	64.896	Latimeria_chalumnae
ENSATEG00000004406	rbm17	100	80.706	ENSLOCG00000015659	rbm17	100	80.706	Lepisosteus_oculatus
ENSATEG00000004406	rbm17	100	79.009	ENSLAFG00000011629	RBM17	100	79.009	Loxodonta_africana
ENSATEG00000004406	rbm17	100	78.774	ENSMFAG00000035521	RBM17	97	85.833	Macaca_fascicularis
ENSATEG00000004406	rbm17	100	78.774	ENSMMUG00000015152	RBM17	97	85.833	Macaca_mulatta
ENSATEG00000004406	rbm17	100	78.774	ENSMNEG00000017264	RBM17	97	85.833	Macaca_nemestrina
ENSATEG00000004406	rbm17	100	78.774	ENSMLEG00000029340	RBM17	97	85.833	Mandrillus_leucophaeus
ENSATEG00000004406	rbm17	100	93.587	ENSMAMG00000000387	rbm17	100	93.587	Mastacembelus_armatus
ENSATEG00000004406	rbm17	100	93.112	ENSMZEG00005015179	rbm17	100	93.112	Maylandia_zebra
ENSATEG00000004406	rbm17	100	79.577	ENSMGAG00000003981	RBM17	100	79.577	Meleagris_gallopavo
ENSATEG00000004406	rbm17	100	79.245	ENSMAUG00000019247	Rbm17	100	79.245	Mesocricetus_auratus
ENSATEG00000004406	rbm17	100	79.245	ENSMICG00000003976	-	100	79.245	Microcebus_murinus
ENSATEG00000004406	rbm17	100	73.882	ENSMICG00000041489	-	100	73.882	Microcebus_murinus
ENSATEG00000004406	rbm17	93	63.452	ENSMOCG00000014517	-	99	63.298	Microtus_ochrogaster
ENSATEG00000004406	rbm17	100	79.245	ENSMOCG00000011847	Rbm17	100	79.245	Microtus_ochrogaster
ENSATEG00000004406	rbm17	100	85.086	ENSMMOG00000010264	rbm17	100	84.841	Mola_mola
ENSATEG00000004406	rbm17	100	78.538	ENSMODG00000016648	RBM17	100	78.538	Monodelphis_domestica
ENSATEG00000004406	rbm17	100	92.417	ENSMALG00000010597	rbm17	100	93.839	Monopterus_albus
ENSATEG00000004406	rbm17	100	79.481	MGP_CAROLIEiJ_G0023173	Rbm17	100	79.481	Mus_caroli
ENSATEG00000004406	rbm17	100	79.481	ENSMUSG00000037197	Rbm17	100	79.481	Mus_musculus
ENSATEG00000004406	rbm17	100	79.481	MGP_PahariEiJ_G0019233	Rbm17	100	79.481	Mus_pahari
ENSATEG00000004406	rbm17	100	79.481	MGP_SPRETEiJ_G0024091	Rbm17	100	79.481	Mus_spretus
ENSATEG00000004406	rbm17	86	76.839	ENSMPUG00000016359	RBM17	96	76.839	Mustela_putorius_furo
ENSATEG00000004406	rbm17	100	77.647	ENSMLUG00000002302	-	100	77.647	Myotis_lucifugus
ENSATEG00000004406	rbm17	100	74.528	ENSMLUG00000025709	-	100	73.349	Myotis_lucifugus
ENSATEG00000004406	rbm17	100	56.576	ENSNGAG00000000663	-	100	55.583	Nannospalax_galili
ENSATEG00000004406	rbm17	100	79.245	ENSNGAG00000000741	Rbm17	100	79.245	Nannospalax_galili
ENSATEG00000004406	rbm17	100	87.531	ENSNBRG00000018148	rbm17	100	87.531	Neolamprologus_brichardi
ENSATEG00000004406	rbm17	100	78.774	ENSNLEG00000033350	RBM17	97	85.833	Nomascus_leucogenys
ENSATEG00000004406	rbm17	100	73.349	ENSMEUG00000011347	RBM17	100	73.349	Notamacropus_eugenii
ENSATEG00000004406	rbm17	100	68.632	ENSOPRG00000002993	RBM17	100	68.632	Ochotona_princeps
ENSATEG00000004406	rbm17	100	79.059	ENSODEG00000004393	RBM17	100	79.059	Octodon_degus
ENSATEG00000004406	rbm17	97	61.220	ENSODEG00000007286	-	99	61.220	Octodon_degus
ENSATEG00000004406	rbm17	100	90.499	ENSONIG00000011838	rbm17	100	90.499	Oreochromis_niloticus
ENSATEG00000004406	rbm17	100	77.358	ENSOANG00000015455	RBM17	100	77.830	Ornithorhynchus_anatinus
ENSATEG00000004406	rbm17	100	92.399	ENSORLG00000028798	rbm17	100	92.399	Oryzias_latipes
ENSATEG00000004406	rbm17	100	91.924	ENSORLG00020004593	rbm17	98	91.924	Oryzias_latipes_hni
ENSATEG00000004406	rbm17	100	92.162	ENSORLG00015000033	rbm17	99	92.162	Oryzias_latipes_hsok
ENSATEG00000004406	rbm17	100	92.637	ENSOMEG00000012060	rbm17	100	92.637	Oryzias_melastigma
ENSATEG00000004406	rbm17	100	79.481	ENSOGAG00000015687	RBM17	100	79.481	Otolemur_garnettii
ENSATEG00000004406	rbm17	100	79.245	ENSOARG00000012975	RBM17	100	79.245	Ovis_aries
ENSATEG00000004406	rbm17	100	78.774	ENSPPAG00000032347	RBM17	97	85.833	Pan_paniscus
ENSATEG00000004406	rbm17	100	79.009	ENSPPRG00000010706	RBM17	100	79.009	Panthera_pardus
ENSATEG00000004406	rbm17	100	79.009	ENSPTIG00000007596	RBM17	100	79.009	Panthera_tigris_altaica
ENSATEG00000004406	rbm17	100	78.774	ENSPTRG00000002265	RBM17	97	85.833	Pan_troglodytes
ENSATEG00000004406	rbm17	100	78.774	ENSPANG00000023425	RBM17	97	85.833	Papio_anubis
ENSATEG00000004406	rbm17	100	77.228	ENSPKIG00000005048	-	100	78.960	Paramormyrops_kingsleyae
ENSATEG00000004406	rbm17	100	81.925	ENSPKIG00000025526	rbm17	100	81.499	Paramormyrops_kingsleyae
ENSATEG00000004406	rbm17	100	78.689	ENSPSIG00000012332	RBM17	100	78.689	Pelodiscus_sinensis
ENSATEG00000004406	rbm17	100	86.104	ENSPMGG00000007980	rbm17	100	86.104	Periophthalmus_magnuspinnatus
ENSATEG00000004406	rbm17	100	79.245	ENSPEMG00000014320	Rbm17	100	79.245	Peromyscus_maniculatus_bairdii
ENSATEG00000004406	rbm17	100	78.169	ENSPCIG00000019260	-	100	78.169	Phascolarctos_cinereus
ENSATEG00000004406	rbm17	100	92.162	ENSPFOG00000013271	rbm17	100	92.162	Poecilia_formosa
ENSATEG00000004406	rbm17	100	91.686	ENSPLAG00000004455	rbm17	100	91.686	Poecilia_latipinna
ENSATEG00000004406	rbm17	100	92.162	ENSPMEG00000014864	rbm17	100	92.162	Poecilia_mexicana
ENSATEG00000004406	rbm17	100	92.162	ENSPREG00000015589	rbm17	100	92.162	Poecilia_reticulata
ENSATEG00000004406	rbm17	99	60.190	ENSPPYG00000019881	-	100	60.190	Pongo_abelii
ENSATEG00000004406	rbm17	81	56.442	ENSPPYG00000019042	-	100	56.442	Pongo_abelii
ENSATEG00000004406	rbm17	100	78.774	ENSPPYG00000002067	RBM17	100	78.774	Pongo_abelii
ENSATEG00000004406	rbm17	100	71.698	ENSPCAG00000016879	RBM17	100	71.698	Procavia_capensis
ENSATEG00000004406	rbm17	100	79.245	ENSPCOG00000027881	RBM17	100	79.245	Propithecus_coquereli
ENSATEG00000004406	rbm17	100	70.519	ENSPVAG00000015499	RBM17	100	69.811	Pteropus_vampyrus
ENSATEG00000004406	rbm17	100	81.592	ENSPNYG00000015274	rbm17	100	81.592	Pundamilia_nyererei
ENSATEG00000004406	rbm17	100	84.397	ENSPNAG00000030046	rbm17	100	84.634	Pygocentrus_nattereri
ENSATEG00000004406	rbm17	100	79.245	ENSRNOG00000018767	Rbm17	100	79.245	Rattus_norvegicus
ENSATEG00000004406	rbm17	100	79.404	ENSRBIG00000043727	RBM17	97	85.833	Rhinopithecus_bieti
ENSATEG00000004406	rbm17	100	78.774	ENSRROG00000044142	RBM17	97	85.833	Rhinopithecus_roxellana
ENSATEG00000004406	rbm17	100	79.009	ENSSBOG00000031661	-	91	88.496	Saimiri_boliviensis_boliviensis
ENSATEG00000004406	rbm17	100	70.617	ENSSBOG00000023653	-	100	70.370	Saimiri_boliviensis_boliviensis
ENSATEG00000004406	rbm17	100	79.245	ENSSHAG00000012480	-	100	79.245	Sarcophilus_harrisii
ENSATEG00000004406	rbm17	100	82.160	ENSSFOG00015009892	rbm17	100	82.629	Scleropages_formosus
ENSATEG00000004406	rbm17	100	87.500	ENSSMAG00000012368	rbm17	100	87.500	Scophthalmus_maximus
ENSATEG00000004406	rbm17	100	93.240	ENSSDUG00000015015	rbm17	100	93.240	Seriola_dumerili
ENSATEG00000004406	rbm17	100	93.240	ENSSLDG00000014486	rbm17	100	93.240	Seriola_lalandi_dorsalis
ENSATEG00000004406	rbm17	50	78.182	ENSSARG00000001792	-	79	78.182	Sorex_araneus
ENSATEG00000004406	rbm17	99	79.669	ENSSPUG00000001036	RBM17	99	79.669	Sphenodon_punctatus
ENSATEG00000004406	rbm17	100	95.012	ENSSPAG00000002338	rbm17	100	95.012	Stegastes_partitus
ENSATEG00000004406	rbm17	100	79.009	ENSSSCG00000011134	RBM17	100	79.009	Sus_scrofa
ENSATEG00000004406	rbm17	100	79.245	ENSTGUG00000002013	RBM17	100	79.245	Taeniopygia_guttata
ENSATEG00000004406	rbm17	100	90.499	ENSTRUG00000010698	rbm17	100	90.499	Takifugu_rubripes
ENSATEG00000004406	rbm17	100	89.549	ENSTNIG00000006892	rbm17	100	89.549	Tetraodon_nigroviridis
ENSATEG00000004406	rbm17	100	61.975	ENSTBEG00000014686	RBM17	100	62.222	Tupaia_belangeri
ENSATEG00000004406	rbm17	90	78.962	ENSTTRG00000001344	RBM17	100	78.962	Tursiops_truncatus
ENSATEG00000004406	rbm17	100	77.419	ENSUAMG00000009499	RBM17	100	77.419	Ursus_americanus
ENSATEG00000004406	rbm17	100	79.009	ENSUMAG00000012237	RBM17	100	79.009	Ursus_maritimus
ENSATEG00000004406	rbm17	86	84.444	ENSVPAG00000005497	RBM17	86	84.444	Vicugna_pacos
ENSATEG00000004406	rbm17	100	79.156	ENSVVUG00000006780	RBM17	100	79.156	Vulpes_vulpes
ENSATEG00000004406	rbm17	99	76.010	ENSXETG00000018123	rbm17	100	75.772	Xenopus_tropicalis
ENSATEG00000004406	rbm17	100	91.686	ENSXMAG00000008674	rbm17	100	91.686	Xiphophorus_maculatus