EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000004661 (Gene tree)
Gene ID: 113161470
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 11655 bases
Position: chrOOHO01000002.1:5619278-5630932
Accession: 113161470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000006608	RNA_bind	PF08675.11	1.9e-33	1	1
ENSATEP00000006608	CAF1	PF04857.20	2.1e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000006721	-	5651	-	ENSATEP00000006608	684 (aa)	XP_026214856	UPI000E45C41C

Gene Model

Click here to download ENSATEG00000004661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000004661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000004661	parn	88	72.213	ENSG00000140694	PARN	99	71.777	Homo_sapiens
ENSATEG00000004661	parn	78	78.957	ENSAMEG00000011208	PARN	83	78.957	Ailuropoda_melanoleuca
ENSATEG00000004661	parn	87	83.881	ENSACIG00000000619	parn	99	83.881	Amphilophus_citrinellus
ENSATEG00000004661	parn	100	88.534	ENSAOCG00000003465	parn	100	88.824	Amphiprion_ocellaris
ENSATEG00000004661	parn	72	94.094	ENSAPEG00000010661	parn	94	94.094	Amphiprion_percula
ENSATEG00000004661	parn	83	74.138	ENSAPLG00000013914	PARN	90	74.655	Anas_platyrhynchos
ENSATEG00000004661	parn	83	74.320	ENSACAG00000004973	PARN	99	69.325	Anolis_carolinensis
ENSATEG00000004661	parn	83	74.829	ENSANAG00000031516	PARN	91	76.271	Aotus_nancymaae
ENSATEG00000004661	parn	100	90.205	ENSACLG00000004742	parn	100	90.205	Astatotilapia_calliptera
ENSATEG00000004661	parn	100	71.988	ENSAMXG00000012390	parn	96	76.127	Astyanax_mexicanus
ENSATEG00000004661	parn	83	71.698	ENSBTAG00000018097	PARN	89	74.521	Bos_taurus
ENSATEG00000004661	parn	83	74.829	ENSCJAG00000015866	PARN	91	76.271	Callithrix_jacchus
ENSATEG00000004661	parn	78	78.731	ENSCAFG00000018795	PARN	83	78.731	Canis_familiaris
ENSATEG00000004661	parn	78	79.104	ENSCAFG00020024126	PARN	83	79.104	Canis_lupus_dingo
ENSATEG00000004661	parn	83	74.399	ENSCHIG00000018143	PARN	90	74.399	Capra_hircus
ENSATEG00000004661	parn	68	51.975	ENSCAPG00000007984	PARN	78	51.975	Cavia_aperea
ENSATEG00000004661	parn	88	70.418	ENSCPOG00000002263	PARN	99	68.196	Cavia_porcellus
ENSATEG00000004661	parn	83	74.829	ENSCCAG00000030367	PARN	91	76.271	Cebus_capucinus
ENSATEG00000004661	parn	78	79.478	ENSCATG00000041368	PARN	95	79.478	Cercocebus_atys
ENSATEG00000004661	parn	50	32.414	ENSCATG00000033196	PNLDC1	72	32.414	Cercocebus_atys
ENSATEG00000004661	parn	88	71.082	ENSCLAG00000015406	PARN	99	68.971	Chinchilla_lanigera
ENSATEG00000004661	parn	88	71.659	ENSCSAG00000008142	PARN	95	71.659	Chlorocebus_sabaeus
ENSATEG00000004661	parn	82	58.448	ENSCHOG00000007014	PARN	99	54.854	Choloepus_hoffmanni
ENSATEG00000004661	parn	74	75.954	ENSCPBG00000006609	PARN	90	75.954	Chrysemys_picta_bellii
ENSATEG00000004661	parn	75	43.446	ENSCING00000010142	-	99	43.446	Ciona_intestinalis
ENSATEG00000004661	parn	88	61.356	ENSCANG00000028849	-	86	76.271	Colobus_angolensis_palliatus
ENSATEG00000004661	parn	83	74.826	ENSCGRG00001012096	Parn	99	68.944	Cricetulus_griseus_chok1gshd
ENSATEG00000004661	parn	83	74.826	ENSCGRG00000004939	Parn	99	68.944	Cricetulus_griseus_crigri
ENSATEG00000004661	parn	100	84.716	ENSCSEG00000002064	parn	100	84.716	Cynoglossus_semilaevis
ENSATEG00000004661	parn	100	85.547	ENSCVAG00000014848	parn	100	84.964	Cyprinodon_variegatus
ENSATEG00000004661	parn	100	67.052	ENSDARG00000102634	parn	100	66.522	Danio_rerio
ENSATEG00000004661	parn	83	74.486	ENSDNOG00000000833	PARN	94	79.104	Dasypus_novemcinctus
ENSATEG00000004661	parn	61	76.894	ENSETEG00000014828	-	69	76.894	Echinops_telfairi
ENSATEG00000004661	parn	88	70.692	ENSEASG00005011400	PARN	99	68.453	Equus_asinus_asinus
ENSATEG00000004661	parn	88	70.531	ENSECAG00000017792	PARN	99	68.300	Equus_caballus
ENSATEG00000004661	parn	74	65.315	ENSEEUG00000010370	PARN	82	65.315	Erinaceus_europaeus
ENSATEG00000004661	parn	100	76.343	ENSELUG00000013139	parn	90	76.488	Esox_lucius
ENSATEG00000004661	parn	78	79.478	ENSFCAG00000044961	PARN	83	79.478	Felis_catus
ENSATEG00000004661	parn	82	74.394	ENSFALG00000003911	PARN	89	74.913	Ficedula_albicollis
ENSATEG00000004661	parn	82	75.347	ENSFDAG00000009234	PARN	90	75.347	Fukomys_damarensis
ENSATEG00000004661	parn	87	80.363	ENSFHEG00000013738	parn	92	89.831	Fundulus_heteroclitus
ENSATEG00000004661	parn	80	86.545	ENSGMOG00000003231	parn	99	86.545	Gadus_morhua
ENSATEG00000004661	parn	83	74.399	ENSGALG00000003091	PARN	91	74.742	Gallus_gallus
ENSATEG00000004661	parn	100	84.279	ENSGAFG00000011061	parn	100	84.279	Gambusia_affinis
ENSATEG00000004661	parn	100	76.912	ENSGACG00000019501	parn	100	76.046	Gasterosteus_aculeatus
ENSATEG00000004661	parn	88	72.213	ENSGGOG00000025224	PARN	97	76.271	Gorilla_gorilla
ENSATEG00000004661	parn	100	90.219	ENSHBUG00000017906	parn	100	89.927	Haplochromis_burtoni
ENSATEG00000004661	parn	84	73.469	ENSHGLG00000010886	PARN	99	68.356	Heterocephalus_glaber_female
ENSATEG00000004661	parn	84	73.469	ENSHGLG00100014659	PARN	99	68.356	Heterocephalus_glaber_male
ENSATEG00000004661	parn	83	81.424	ENSHCOG00000008683	parn	99	81.424	Hippocampus_comes
ENSATEG00000004661	parn	100	62.518	ENSIPUG00000012401	parn	100	62.609	Ictalurus_punctatus
ENSATEG00000004661	parn	88	70.484	ENSSTOG00000007519	PARN	95	70.484	Ictidomys_tridecemlineatus
ENSATEG00000004661	parn	83	73.966	ENSJJAG00000023049	Parn	91	74.520	Jaculus_jaculus
ENSATEG00000004661	parn	100	86.111	ENSKMAG00000009462	parn	100	86.111	Kryptolebias_marmoratus
ENSATEG00000004661	parn	93	89.655	ENSLBEG00000009167	parn	100	89.655	Labrus_bergylta
ENSATEG00000004661	parn	75	74.379	ENSLACG00000004207	PARN	100	75.472	Latimeria_chalumnae
ENSATEG00000004661	parn	100	71.429	ENSLOCG00000000715	parn	100	71.429	Lepisosteus_oculatus
ENSATEG00000004661	parn	83	75.304	ENSLAFG00000015036	PARN	99	69.183	Loxodonta_africana
ENSATEG00000004661	parn	88	68.438	ENSMFAG00000044852	PARN	94	71.250	Macaca_fascicularis
ENSATEG00000004661	parn	88	71.659	ENSMMUG00000018849	PARN	92	76.271	Macaca_mulatta
ENSATEG00000004661	parn	88	71.659	ENSMNEG00000045108	PARN	92	76.271	Macaca_nemestrina
ENSATEG00000004661	parn	88	71.498	ENSMLEG00000031743	PARN	92	76.271	Mandrillus_leucophaeus
ENSATEG00000004661	parn	100	91.703	ENSMAMG00000006939	parn	100	91.557	Mastacembelus_armatus
ENSATEG00000004661	parn	100	90.351	ENSMZEG00005013590	parn	100	90.351	Maylandia_zebra
ENSATEG00000004661	parn	82	72.870	ENSMGAG00000001004	PARN	90	72.870	Meleagris_gallopavo
ENSATEG00000004661	parn	92	63.859	ENSMAUG00000008025	Parn	99	63.859	Mesocricetus_auratus
ENSATEG00000004661	parn	88	71.337	ENSMICG00000016053	PARN	99	69.372	Microcebus_murinus
ENSATEG00000004661	parn	72	79.798	ENSMOCG00000022211	Parn	100	79.798	Microtus_ochrogaster
ENSATEG00000004661	parn	81	89.150	ENSMMOG00000011333	parn	90	89.150	Mola_mola
ENSATEG00000004661	parn	72	81.690	ENSMODG00000004915	PARN	99	81.690	Monodelphis_domestica
ENSATEG00000004661	parn	96	90.563	ENSMALG00000019426	parn	94	93.682	Monopterus_albus
ENSATEG00000004661	parn	82	73.252	MGP_CAROLIEiJ_G0020466	Parn	99	67.079	Mus_caroli
ENSATEG00000004661	parn	82	73.601	ENSMUSG00000022685	Parn	100	75.610	Mus_musculus
ENSATEG00000004661	parn	83	72.837	MGP_PahariEiJ_G0016172	Parn	91	72.837	Mus_pahari
ENSATEG00000004661	parn	82	73.345	MGP_SPRETEiJ_G0021361	Parn	99	67.180	Mus_spretus
ENSATEG00000004661	parn	78	79.478	ENSMPUG00000014464	PARN	83	79.478	Mustela_putorius_furo
ENSATEG00000004661	parn	72	79.192	ENSMLUG00000005414	PARN	100	79.192	Myotis_lucifugus
ENSATEG00000004661	parn	81	91.486	ENSNBRG00000006805	parn	93	91.486	Neolamprologus_brichardi
ENSATEG00000004661	parn	84	74.324	ENSNLEG00000010241	PARN	91	76.271	Nomascus_leucogenys
ENSATEG00000004661	parn	69	65.000	ENSMEUG00000008178	-	74	65.000	Notamacropus_eugenii
ENSATEG00000004661	parn	82	70.087	ENSOPRG00000012187	PARN	90	70.087	Ochotona_princeps
ENSATEG00000004661	parn	84	68.631	ENSODEG00000001617	PARN	91	68.631	Octodon_degus
ENSATEG00000004661	parn	100	90.073	ENSONIG00000000151	parn	100	89.781	Oreochromis_niloticus
ENSATEG00000004661	parn	83	74.742	ENSOCUG00000000322	PARN	91	74.742	Oryctolagus_cuniculus
ENSATEG00000004661	parn	100	81.752	ENSORLG00020010313	parn	100	82.044	Oryzias_latipes_hni
ENSATEG00000004661	parn	100	81.460	ENSORLG00015000300	parn	100	81.752	Oryzias_latipes_hsok
ENSATEG00000004661	parn	100	80.758	ENSOMEG00000019555	parn	100	80.292	Oryzias_melastigma
ENSATEG00000004661	parn	72	79.234	ENSOGAG00000014626	PARN	100	79.234	Otolemur_garnettii
ENSATEG00000004661	parn	72	80.808	ENSOARG00000007574	PARN	100	80.808	Ovis_aries
ENSATEG00000004661	parn	88	72.052	ENSPPAG00000031438	PARN	94	76.271	Pan_paniscus
ENSATEG00000004661	parn	78	79.478	ENSPPRG00000018583	PARN	83	79.478	Panthera_pardus
ENSATEG00000004661	parn	78	79.478	ENSPTIG00000012135	PARN	83	79.478	Panthera_tigris_altaica
ENSATEG00000004661	parn	88	72.052	ENSPTRG00000007792	PARN	94	76.271	Pan_troglodytes
ENSATEG00000004661	parn	88	69.565	ENSPANG00000020099	PARN	92	76.271	Papio_anubis
ENSATEG00000004661	parn	99	69.943	ENSPKIG00000022807	parn	96	70.043	Paramormyrops_kingsleyae
ENSATEG00000004661	parn	83	75.043	ENSPSIG00000014804	PARN	91	75.043	Pelodiscus_sinensis
ENSATEG00000004661	parn	87	81.032	ENSPMGG00000014431	parn	83	81.198	Periophthalmus_magnuspinnatus
ENSATEG00000004661	parn	83	72.870	ENSPEMG00000018439	Parn	90	72.870	Peromyscus_maniculatus_bairdii
ENSATEG00000004661	parn	76	69.750	ENSPMAG00000003956	parn	98	69.750	Petromyzon_marinus
ENSATEG00000004661	parn	62	73.131	ENSPCIG00000001259	PARN	91	76.271	Phascolarctos_cinereus
ENSATEG00000004661	parn	100	84.402	ENSPFOG00000012823	parn	100	83.819	Poecilia_formosa
ENSATEG00000004661	parn	100	84.548	ENSPLAG00000006395	parn	100	83.965	Poecilia_latipinna
ENSATEG00000004661	parn	100	84.548	ENSPMEG00000007711	parn	100	83.965	Poecilia_mexicana
ENSATEG00000004661	parn	100	84.548	ENSPREG00000000147	parn	100	83.965	Poecilia_reticulata
ENSATEG00000004661	parn	88	71.268	ENSPPYG00000007123	PARN	95	72.654	Pongo_abelii
ENSATEG00000004661	parn	78	65.209	ENSPCAG00000001741	PARN	90	65.209	Procavia_capensis
ENSATEG00000004661	parn	83	71.918	ENSPCOG00000019292	PARN	94	74.576	Propithecus_coquereli
ENSATEG00000004661	parn	87	67.974	ENSPVAG00000002547	PARN	99	65.839	Pteropus_vampyrus
ENSATEG00000004661	parn	100	90.073	ENSPNYG00000006835	parn	100	89.781	Pundamilia_nyererei
ENSATEG00000004661	parn	93	71.851	ENSPNAG00000018905	parn	100	71.851	Pygocentrus_nattereri
ENSATEG00000004661	parn	83	73.565	ENSRNOG00000002912	Parn	96	78.571	Rattus_norvegicus
ENSATEG00000004661	parn	83	73.116	ENSSBOG00000034726	PARN	87	76.271	Saimiri_boliviensis_boliviensis
ENSATEG00000004661	parn	61	80.144	ENSSHAG00000008493	PARN	93	80.144	Sarcophilus_harrisii
ENSATEG00000004661	parn	100	71.266	ENSSFOG00015014165	parn	98	75.753	Scleropages_formosus
ENSATEG00000004661	parn	100	86.266	ENSSMAG00000000685	parn	100	86.409	Scophthalmus_maximus
ENSATEG00000004661	parn	100	91.849	ENSSDUG00000014555	parn	100	91.849	Seriola_dumerili
ENSATEG00000004661	parn	63	81.609	ENSSARG00000014339	PARN	75	81.609	Sorex_araneus
ENSATEG00000004661	parn	84	74.411	ENSSPUG00000007719	PARN	92	74.411	Sphenodon_punctatus
ENSATEG00000004661	parn	100	90.365	ENSSPAG00000007095	parn	100	90.073	Stegastes_partitus
ENSATEG00000004661	parn	88	71.082	ENSSSCG00000007878	PARN	84	71.082	Sus_scrofa
ENSATEG00000004661	parn	83	73.846	ENSTGUG00000004971	PARN	91	74.359	Taeniopygia_guttata
ENSATEG00000004661	parn	83	89.261	ENSTNIG00000008252	parn	90	89.965	Tetraodon_nigroviridis
ENSATEG00000004661	parn	80	59.964	ENSTBEG00000010407	PARN	99	58.418	Tupaia_belangeri
ENSATEG00000004661	parn	71	80.287	ENSTTRG00000002843	PARN	99	65.217	Tursiops_truncatus
ENSATEG00000004661	parn	64	72.769	ENSUAMG00000008283	PARN	94	68.879	Ursus_americanus
ENSATEG00000004661	parn	78	79.291	ENSUMAG00000004527	PARN	83	79.291	Ursus_maritimus
ENSATEG00000004661	parn	82	71.404	ENSVPAG00000008968	PARN	93	71.404	Vicugna_pacos
ENSATEG00000004661	parn	78	79.104	ENSVVUG00000019509	PARN	95	71.987	Vulpes_vulpes
ENSATEG00000004661	parn	83	72.945	ENSXETG00000010994	parn	100	77.547	Xenopus_tropicalis
ENSATEG00000004661	parn	87	82.521	ENSXCOG00000015990	parn	99	82.353	Xiphophorus_couchianus
ENSATEG00000004661	parn	100	83.796	ENSXMAG00000014783	parn	100	83.796	Xiphophorus_maculatus