EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000005246 (Gene tree)
Gene ID: 113165453
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 16889 bases
Position: chrOOHO01000020.1:13069854-13086742
Accession: 113165453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000007682	ResIII	PF04851.15	7.4e-07	1	1
ENSATEP00000007701	ResIII	PF04851.15	9.9e-07	1	1
ENSATEP00000007665	ResIII	PF04851.15	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000007792	-	7626	-	ENSATEP00000007665	1819 (aa)	XP_026220707	UPI000E457473
ENSATET00000007809	-	7494	-	ENSATEP00000007682	1775 (aa)	XP_026220709	UPI000E45A9CE
ENSATET00000007828	-	5337	-	ENSATEP00000007701	1778 (aa)	-	-

Gene Model

Click here to download ENSATEG00000005246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000005246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000005246	chd2	89	56.919	ENSATEG00000010676	chd1	87	59.352

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000005246	chd2	100	71.568	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSATEG00000005246	chd2	100	93.919	ENSAPOG00000008913	chd2	100	93.806	Acanthochromis_polyacanthus
ENSATEG00000005246	chd2	65	74.809	ENSAMEG00000010805	-	93	76.873	Ailuropoda_melanoleuca
ENSATEG00000005246	chd2	100	90.220	ENSAOCG00000016332	chd2	100	90.165	Amphiprion_ocellaris
ENSATEG00000005246	chd2	100	93.750	ENSAPEG00000016676	chd2	100	93.637	Amphiprion_percula
ENSATEG00000005246	chd2	100	71.344	ENSAPLG00000011141	-	100	70.699	Anas_platyrhynchos
ENSATEG00000005246	chd2	98	69.118	ENSACAG00000000088	-	96	69.609	Anolis_carolinensis
ENSATEG00000005246	chd2	100	71.551	ENSANAG00000024017	-	96	72.340	Aotus_nancymaae
ENSATEG00000005246	chd2	98	89.298	ENSACLG00000021370	chd2	98	95.294	Astatotilapia_calliptera
ENSATEG00000005246	chd2	100	71.337	ENSCJAG00000020444	-	96	72.116	Callithrix_jacchus
ENSATEG00000005246	chd2	99	71.954	ENSCAFG00000010998	CHD2	95	76.070	Canis_familiaris
ENSATEG00000005246	chd2	99	70.474	ENSCHIG00000022261	-	98	70.293	Capra_hircus
ENSATEG00000005246	chd2	100	72.088	ENSTSYG00000003272	-	95	74.274	Carlito_syrichta
ENSATEG00000005246	chd2	93	74.654	ENSCPOG00000005800	-	95	76.439	Cavia_porcellus
ENSATEG00000005246	chd2	100	71.605	ENSCCAG00000035304	-	96	72.396	Cebus_capucinus
ENSATEG00000005246	chd2	100	71.460	ENSCATG00000031069	-	96	72.254	Cercocebus_atys
ENSATEG00000005246	chd2	100	71.030	ENSCLAG00000016269	-	96	71.801	Chinchilla_lanigera
ENSATEG00000005246	chd2	100	71.514	ENSCSAG00000017007	-	96	72.310	Chlorocebus_sabaeus
ENSATEG00000005246	chd2	73	81.130	ENSCHOG00000000608	-	76	81.211	Choloepus_hoffmanni
ENSATEG00000005246	chd2	81	77.027	ENSCPBG00000018049	-	95	82.181	Chrysemys_picta_bellii
ENSATEG00000005246	chd2	76	52.168	ENSCSAVG00000007580	-	94	58.031	Ciona_savignyi
ENSATEG00000005246	chd2	100	71.460	ENSCANG00000038126	-	99	70.440	Colobus_angolensis_palliatus
ENSATEG00000005246	chd2	100	71.820	ENSCGRG00001006649	Chd2	96	72.060	Cricetulus_griseus_chok1gshd
ENSATEG00000005246	chd2	100	71.820	ENSCGRG00000018154	Chd2	96	72.060	Cricetulus_griseus_crigri
ENSATEG00000005246	chd2	95	93.939	ENSCSEG00000003646	chd2	95	96.471	Cynoglossus_semilaevis
ENSATEG00000005246	chd2	97	93.000	ENSCVAG00000002427	chd2	100	81.394	Cyprinodon_variegatus
ENSATEG00000005246	chd2	100	80.272	ENSDARG00000060687	chd2	100	82.238	Danio_rerio
ENSATEG00000005246	chd2	99	71.888	ENSDNOG00000009796	-	97	72.016	Dasypus_novemcinctus
ENSATEG00000005246	chd2	51	75.532	ENSEBUG00000014994	chd2	85	75.532	Eptatretus_burgeri
ENSATEG00000005246	chd2	99	72.234	ENSEASG00005015526	-	97	78.344	Equus_asinus_asinus
ENSATEG00000005246	chd2	100	81.897	ENSELUG00000017981	chd2	100	82.725	Esox_lucius
ENSATEG00000005246	chd2	99	71.598	ENSFALG00000010369	-	96	72.574	Ficedula_albicollis
ENSATEG00000005246	chd2	100	70.954	ENSFDAG00000020651	-	96	72.084	Fukomys_damarensis
ENSATEG00000005246	chd2	96	91.000	ENSFHEG00000002119	chd2	100	91.000	Fundulus_heteroclitus
ENSATEG00000005246	chd2	95	83.025	ENSGMOG00000002890	chd2	99	83.199	Gadus_morhua
ENSATEG00000005246	chd2	100	71.543	ENSGALG00000006949	CHD2	100	71.168	Gallus_gallus
ENSATEG00000005246	chd2	99	88.577	ENSGAFG00000001905	chd2	97	91.765	Gambusia_affinis
ENSATEG00000005246	chd2	95	89.120	ENSGACG00000013246	chd2	99	89.178	Gasterosteus_aculeatus
ENSATEG00000005246	chd2	81	79.231	ENSGAGG00000013176	-	98	82.604	Gopherus_agassizii
ENSATEG00000005246	chd2	100	70.639	ENSGGOG00000015677	CHD2	96	71.277	Gorilla_gorilla
ENSATEG00000005246	chd2	100	93.132	ENSHBUG00000017947	chd2	98	95.294	Haplochromis_burtoni
ENSATEG00000005246	chd2	100	71.245	ENSHGLG00000004435	CHD2	96	71.964	Heterocephalus_glaber_female
ENSATEG00000005246	chd2	100	70.869	ENSHGLG00100016376	-	96	71.572	Heterocephalus_glaber_male
ENSATEG00000005246	chd2	99	80.756	ENSHCOG00000008855	chd2	97	80.426	Hippocampus_comes
ENSATEG00000005246	chd2	99	76.824	ENSIPUG00000000488	chd2	98	78.161	Ictalurus_punctatus
ENSATEG00000005246	chd2	100	71.894	ENSSTOG00000001270	-	96	72.524	Ictidomys_tridecemlineatus
ENSATEG00000005246	chd2	100	71.118	ENSJJAG00000000213	Chd2	96	71.955	Jaculus_jaculus
ENSATEG00000005246	chd2	84	87.733	ENSKMAG00000015849	chd2	99	87.842	Kryptolebias_marmoratus
ENSATEG00000005246	chd2	77	74.628	ENSLAFG00000016885	-	98	81.200	Loxodonta_africana
ENSATEG00000005246	chd2	100	71.514	ENSMFAG00000033343	-	96	72.310	Macaca_fascicularis
ENSATEG00000005246	chd2	100	71.514	ENSMMUG00000011782	-	96	72.310	Macaca_mulatta
ENSATEG00000005246	chd2	100	71.275	ENSMNEG00000036875	-	96	72.059	Macaca_nemestrina
ENSATEG00000005246	chd2	100	71.514	ENSMLEG00000035026	-	96	72.310	Mandrillus_leucophaeus
ENSATEG00000005246	chd2	100	93.982	ENSMAMG00000009082	chd2	100	94.094	Mastacembelus_armatus
ENSATEG00000005246	chd2	98	89.298	ENSMZEG00005021333	chd2	98	95.294	Maylandia_zebra
ENSATEG00000005246	chd2	99	71.506	ENSMGAG00000008966	-	99	71.539	Meleagris_gallopavo
ENSATEG00000005246	chd2	99	71.188	ENSMICG00000000332	-	97	70.650	Microcebus_murinus
ENSATEG00000005246	chd2	100	71.942	ENSMOCG00000015124	Chd2	96	72.244	Microtus_ochrogaster
ENSATEG00000005246	chd2	100	72.410	ENSMODG00000013158	-	100	72.303	Monodelphis_domestica
ENSATEG00000005246	chd2	98	90.789	ENSMALG00000007755	chd2	96	96.471	Monopterus_albus
ENSATEG00000005246	chd2	100	71.805	MGP_CAROLIEiJ_G0029860	Chd2	96	72.157	Mus_caroli
ENSATEG00000005246	chd2	100	71.498	ENSMUSG00000078671	Chd2	96	72.172	Mus_musculus
ENSATEG00000005246	chd2	100	71.643	MGP_PahariEiJ_G0013082	Chd2	96	71.989	Mus_pahari
ENSATEG00000005246	chd2	100	71.820	MGP_SPRETEiJ_G0030962	Chd2	96	72.172	Mus_spretus
ENSATEG00000005246	chd2	100	71.878	ENSMPUG00000017577	-	96	72.408	Mustela_putorius_furo
ENSATEG00000005246	chd2	100	70.804	ENSMLUG00000009292	-	98	70.893	Myotis_lucifugus
ENSATEG00000005246	chd2	100	71.766	ENSNGAG00000010792	Chd2	96	72.228	Nannospalax_galili
ENSATEG00000005246	chd2	98	91.138	ENSNBRG00000020591	chd2	99	90.837	Neolamprologus_brichardi
ENSATEG00000005246	chd2	100	69.582	ENSNLEG00000012349	-	95	71.835	Nomascus_leucogenys
ENSATEG00000005246	chd2	68	77.632	ENSMEUG00000001522	-	73	77.632	Notamacropus_eugenii
ENSATEG00000005246	chd2	100	70.522	ENSODEG00000016028	-	96	71.349	Octodon_degus
ENSATEG00000005246	chd2	100	93.077	ENSONIG00000015136	chd2	100	93.022	Oreochromis_niloticus
ENSATEG00000005246	chd2	87	69.521	ENSOANG00000004385	-	99	69.202	Ornithorhynchus_anatinus
ENSATEG00000005246	chd2	100	66.343	ENSOCUG00000001628	-	93	76.915	Oryctolagus_cuniculus
ENSATEG00000005246	chd2	100	90.321	ENSORLG00000008403	chd2	100	90.321	Oryzias_latipes
ENSATEG00000005246	chd2	100	89.780	ENSORLG00020004138	chd2	100	89.780	Oryzias_latipes_hni
ENSATEG00000005246	chd2	100	83.205	ENSOMEG00000005831	chd2	100	82.382	Oryzias_melastigma
ENSATEG00000005246	chd2	100	69.796	ENSOGAG00000010399	-	96	70.285	Otolemur_garnettii
ENSATEG00000005246	chd2	100	72.637	ENSOARG00000010343	-	96	73.207	Ovis_aries
ENSATEG00000005246	chd2	100	70.901	ENSPPAG00000030381	-	96	71.023	Pan_paniscus
ENSATEG00000005246	chd2	100	71.514	ENSPTRG00000007478	CHD2	96	72.310	Pan_troglodytes
ENSATEG00000005246	chd2	100	68.884	ENSPANG00000033355	-	96	69.558	Papio_anubis
ENSATEG00000005246	chd2	100	80.950	ENSPKIG00000000495	chd2	100	81.605	Paramormyrops_kingsleyae
ENSATEG00000005246	chd2	85	83.848	ENSPMGG00000009941	chd2	99	83.903	Periophthalmus_magnuspinnatus
ENSATEG00000005246	chd2	100	71.712	ENSPEMG00000019507	Chd2	96	72.004	Peromyscus_maniculatus_bairdii
ENSATEG00000005246	chd2	93	73.743	ENSPCIG00000009417	-	99	77.076	Phascolarctos_cinereus
ENSATEG00000005246	chd2	100	90.934	ENSPFOG00000007050	chd2	100	90.934	Poecilia_formosa
ENSATEG00000005246	chd2	100	91.154	ENSPLAG00000005067	chd2	100	90.989	Poecilia_latipinna
ENSATEG00000005246	chd2	100	91.441	ENSPMEG00000019628	chd2	100	91.441	Poecilia_mexicana
ENSATEG00000005246	chd2	100	70.279	ENSPPYG00000006799	-	96	71.013	Pongo_abelii
ENSATEG00000005246	chd2	100	71.835	ENSPCOG00000028084	-	96	72.300	Propithecus_coquereli
ENSATEG00000005246	chd2	98	89.183	ENSPNYG00000010273	chd2	98	95.294	Pundamilia_nyererei
ENSATEG00000005246	chd2	99	77.998	ENSPNAG00000016719	chd2	97	81.115	Pygocentrus_nattereri
ENSATEG00000005246	chd2	100	71.873	ENSRNOG00000012716	Chd2	97	71.262	Rattus_norvegicus
ENSATEG00000005246	chd2	100	69.973	ENSRBIG00000036875	-	96	70.685	Rhinopithecus_bieti
ENSATEG00000005246	chd2	100	71.514	ENSRROG00000041087	-	96	72.310	Rhinopithecus_roxellana
ENSATEG00000005246	chd2	100	71.551	ENSSBOG00000023754	-	96	72.340	Saimiri_boliviensis_boliviensis
ENSATEG00000005246	chd2	100	72.732	ENSSHAG00000012513	-	100	72.517	Sarcophilus_harrisii
ENSATEG00000005246	chd2	100	82.852	ENSSFOG00015023759	chd2	100	82.852	Scleropages_formosus
ENSATEG00000005246	chd2	100	91.923	ENSSMAG00000001726	chd2	100	91.703	Scophthalmus_maximus
ENSATEG00000005246	chd2	98	93.137	ENSSLDG00000001146	chd2	98	97.647	Seriola_lalandi_dorsalis
ENSATEG00000005246	chd2	76	80.000	ENSSARG00000014112	-	76	80.000	Sorex_araneus
ENSATEG00000005246	chd2	99	69.722	ENSSPUG00000011266	-	92	79.592	Sphenodon_punctatus
ENSATEG00000005246	chd2	99	91.295	ENSSPAG00000016452	chd2	97	96.471	Stegastes_partitus
ENSATEG00000005246	chd2	100	71.888	ENSSSCG00000002266	-	100	74.812	Sus_scrofa
ENSATEG00000005246	chd2	99	71.980	ENSTGUG00000008540	-	96	72.406	Taeniopygia_guttata
ENSATEG00000005246	chd2	88	84.156	ENSTRUG00000008842	chd2	91	83.831	Takifugu_rubripes
ENSATEG00000005246	chd2	87	89.079	ENSTNIG00000010760	chd2	96	89.191	Tetraodon_nigroviridis
ENSATEG00000005246	chd2	73	73.128	ENSTBEG00000017730	-	78	73.128	Tupaia_belangeri
ENSATEG00000005246	chd2	85	88.462	ENSTTRG00000000430	-	90	74.520	Tursiops_truncatus
ENSATEG00000005246	chd2	100	70.316	ENSUMAG00000000083	-	96	70.608	Ursus_maritimus
ENSATEG00000005246	chd2	84	87.342	ENSVPAG00000009645	-	82	87.342	Vicugna_pacos
ENSATEG00000005246	chd2	91	67.043	ENSXETG00000024129	chd2	94	75.642	Xenopus_tropicalis
ENSATEG00000005246	chd2	96	93.333	ENSXCOG00000020255	chd2	99	94.118	Xiphophorus_couchianus
ENSATEG00000005246	chd2	100	91.385	ENSXMAG00000002707	chd2	100	91.554	Xiphophorus_maculatus