EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000005405 (Gene tree)
Gene ID: 113164680
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 6807 bases
Position: chrOOHO01000004.1:23049356-23056162
Accession: ZDB-GENE-060503-321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000007930	MA3	PF02847.17	3.4e-22	1	1
ENSATEP00000007946	MA3	PF02847.17	1.6e-19	1	1
ENSATEP00000007946	MIF4G	PF02854.19	2.5e-17	1	1
ENSATEP00000007930	MIF4G	PF02854.19	5.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000008073	-	2436	-	ENSATEP00000007946	811 (aa)	-	-
ENSATET00000008057	-	2451	-	ENSATEP00000007930	816 (aa)	-	-

Gene Model

Click here to download ENSATEG00000005405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000005405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000005405	nom1	98	54.513	ENSG00000146909	NOM1	80	60.781	Homo_sapiens
ENSATEG00000005405	nom1	65	89.286	ENSAPOG00000012073	nom1	100	77.257	Acanthochromis_polyacanthus
ENSATEG00000005405	nom1	81	58.466	ENSAMEG00000001412	NOM1	98	56.575	Ailuropoda_melanoleuca
ENSATEG00000005405	nom1	64	89.122	ENSACIG00000018050	nom1	98	77.667	Amphilophus_citrinellus
ENSATEG00000005405	nom1	65	88.534	ENSAOCG00000006229	nom1	100	76.325	Amphiprion_ocellaris
ENSATEG00000005405	nom1	65	88.722	ENSAPEG00000015994	nom1	66	87.184	Amphiprion_percula
ENSATEG00000005405	nom1	78	60.829	ENSAPLG00000006585	NOM1	98	58.185	Anas_platyrhynchos
ENSATEG00000005405	nom1	78	56.851	ENSACAG00000011192	NOM1	62	65.485	Anolis_carolinensis
ENSATEG00000005405	nom1	100	75.805	ENSACLG00000000033	nom1	98	76.335	Astatotilapia_calliptera
ENSATEG00000005405	nom1	64	75.142	ENSAMXG00000041486	nom1	64	73.418	Astyanax_mexicanus
ENSATEG00000005405	nom1	97	51.932	ENSBTAG00000016435	NOM1	84	55.370	Bos_taurus
ENSATEG00000005405	nom1	98	54.182	ENSCJAG00000004336	NOM1	85	57.823	Callithrix_jacchus
ENSATEG00000005405	nom1	98	52.701	ENSCAFG00020005121	NOM1	82	57.264	Canis_lupus_dingo
ENSATEG00000005405	nom1	81	58.211	ENSCHIG00000020102	NOM1	84	55.201	Capra_hircus
ENSATEG00000005405	nom1	97	56.196	ENSTSYG00000000227	NOM1	83	59.429	Carlito_syrichta
ENSATEG00000005405	nom1	64	68.451	ENSCAPG00000016273	NOM1	99	68.451	Cavia_aperea
ENSATEG00000005405	nom1	98	51.578	ENSCPOG00000025538	NOM1	84	55.340	Cavia_porcellus
ENSATEG00000005405	nom1	89	68.333	ENSCCAG00000014944	NOM1	99	68.182	Cebus_capucinus
ENSATEG00000005405	nom1	81	59.320	ENSCLAG00000000267	NOM1	64	64.247	Chinchilla_lanigera
ENSATEG00000005405	nom1	82	59.265	ENSCPBG00000018215	NOM1	73	68.311	Chrysemys_picta_bellii
ENSATEG00000005405	nom1	85	36.740	ENSCING00000005248	-	72	39.925	Ciona_intestinalis
ENSATEG00000005405	nom1	64	67.748	ENSCANG00000041984	NOM1	91	66.667	Colobus_angolensis_palliatus
ENSATEG00000005405	nom1	81	59.265	ENSCGRG00001020293	Nom1	63	64.706	Cricetulus_griseus_chok1gshd
ENSATEG00000005405	nom1	64	66.538	ENSCGRG00000005405	Nom1	97	66.859	Cricetulus_griseus_crigri
ENSATEG00000005405	nom1	94	74.349	ENSCSEG00000000932	nom1	94	74.282	Cynoglossus_semilaevis
ENSATEG00000005405	nom1	98	74.455	ENSCVAG00000007562	nom1	98	74.334	Cyprinodon_variegatus
ENSATEG00000005405	nom1	100	63.452	ENSDARG00000060027	nom1	100	76.181	Danio_rerio
ENSATEG00000005405	nom1	64	57.170	ENSDORG00000015682	Nom1	99	52.123	Dipodomys_ordii
ENSATEG00000005405	nom1	62	39.539	FBgn0035336	CG9004	77	37.331	Drosophila_melanogaster
ENSATEG00000005405	nom1	73	57.109	ENSETEG00000003104	NOM1	75	57.109	Echinops_telfairi
ENSATEG00000005405	nom1	53	50.688	ENSEBUG00000010077	nom1	96	50.688	Eptatretus_burgeri
ENSATEG00000005405	nom1	81	62.074	ENSEASG00005001489	NOM1	83	60.169	Equus_asinus_asinus
ENSATEG00000005405	nom1	69	65.961	ENSECAG00000007596	NOM1	59	66.362	Equus_caballus
ENSATEG00000005405	nom1	64	82.286	ENSELUG00000006266	nom1	100	68.038	Esox_lucius
ENSATEG00000005405	nom1	81	58.960	ENSFCAG00000006467	NOM1	86	57.025	Felis_catus
ENSATEG00000005405	nom1	81	59.361	ENSFALG00000006904	NOM1	79	66.007	Ficedula_albicollis
ENSATEG00000005405	nom1	99	52.575	ENSFDAG00000016241	NOM1	85	57.326	Fukomys_damarensis
ENSATEG00000005405	nom1	98	73.415	ENSFHEG00000015974	nom1	98	71.947	Fundulus_heteroclitus
ENSATEG00000005405	nom1	94	60.994	ENSGMOG00000005129	nom1	94	63.302	Gadus_morhua
ENSATEG00000005405	nom1	88	55.890	ENSGALG00000006437	NOM1	81	56.503	Gallus_gallus
ENSATEG00000005405	nom1	98	74.786	ENSGAFG00000003211	nom1	98	75.245	Gambusia_affinis
ENSATEG00000005405	nom1	98	52.644	ENSGAGG00000014347	NOM1	85	67.992	Gopherus_agassizii
ENSATEG00000005405	nom1	98	54.513	ENSGGOG00000010920	NOM1	78	58.663	Gorilla_gorilla
ENSATEG00000005405	nom1	100	76.703	ENSHBUG00000014616	nom1	98	76.306	Haplochromis_burtoni
ENSATEG00000005405	nom1	98	54.064	ENSHGLG00000007392	NOM1	63	65.399	Heterocephalus_glaber_female
ENSATEG00000005405	nom1	86	67.722	ENSHGLG00100014407	NOM1	63	65.399	Heterocephalus_glaber_male
ENSATEG00000005405	nom1	65	72.968	ENSIPUG00000013980	nom1	65	71.273	Ictalurus_punctatus
ENSATEG00000005405	nom1	67	65.336	ENSSTOG00000031736	NOM1	96	65.336	Ictidomys_tridecemlineatus
ENSATEG00000005405	nom1	60	68.712	ENSJJAG00000011716	Nom1	98	68.712	Jaculus_jaculus
ENSATEG00000005405	nom1	98	75.352	ENSLBEG00000009252	nom1	66	84.698	Labrus_bergylta
ENSATEG00000005405	nom1	83	62.464	ENSLACG00000011777	NOM1	87	62.309	Latimeria_chalumnae
ENSATEG00000005405	nom1	98	64.493	ENSLOCG00000012452	nom1	100	64.822	Lepisosteus_oculatus
ENSATEG00000005405	nom1	98	50.061	ENSLAFG00000007119	NOM1	83	53.846	Loxodonta_africana
ENSATEG00000005405	nom1	97	51.391	ENSMMUG00000039033	NOM1	79	57.489	Macaca_mulatta
ENSATEG00000005405	nom1	64	68.321	ENSMLEG00000037062	NOM1	98	68.582	Mandrillus_leucophaeus
ENSATEG00000005405	nom1	100	79.064	ENSMAMG00000004118	nom1	66	86.201	Mastacembelus_armatus
ENSATEG00000005405	nom1	100	75.685	ENSMZEG00005000384	nom1	98	76.214	Maylandia_zebra
ENSATEG00000005405	nom1	82	59.275	ENSMGAG00000005051	NOM1	99	59.019	Meleagris_gallopavo
ENSATEG00000005405	nom1	97	54.300	ENSMAUG00000017988	Nom1	85	58.240	Mesocricetus_auratus
ENSATEG00000005405	nom1	66	65.688	ENSMICG00000017531	NOM1	96	54.424	Microcebus_murinus
ENSATEG00000005405	nom1	98	54.680	ENSMOCG00000015962	Nom1	83	58.708	Microtus_ochrogaster
ENSATEG00000005405	nom1	99	72.684	ENSMMOG00000004419	nom1	99	72.129	Mola_mola
ENSATEG00000005405	nom1	99	53.630	ENSMODG00000005177	NOM1	81	61.884	Monodelphis_domestica
ENSATEG00000005405	nom1	93	80.052	ENSMALG00000008800	nom1	99	78.499	Monopterus_albus
ENSATEG00000005405	nom1	97	53.629	MGP_CAROLIEiJ_G0027043	Nom1	83	57.104	Mus_caroli
ENSATEG00000005405	nom1	97	54.090	ENSMUSG00000001569	Nom1	83	57.240	Mus_musculus
ENSATEG00000005405	nom1	97	53.724	MGP_SPRETEiJ_G0028039	Nom1	83	56.948	Mus_spretus
ENSATEG00000005405	nom1	81	56.535	ENSMPUG00000009745	NOM1	78	62.662	Mustela_putorius_furo
ENSATEG00000005405	nom1	72	63.007	ENSMLUG00000009129	NOM1	92	65.704	Myotis_lucifugus
ENSATEG00000005405	nom1	100	75.685	ENSNBRG00000016429	nom1	95	87.713	Neolamprologus_brichardi
ENSATEG00000005405	nom1	98	53.421	ENSNLEG00000000238	NOM1	80	59.657	Nomascus_leucogenys
ENSATEG00000005405	nom1	69	59.512	ENSMEUG00000001108	NOM1	50	75.918	Notamacropus_eugenii
ENSATEG00000005405	nom1	53	59.136	ENSOPRG00000014676	NOM1	70	50.426	Ochotona_princeps
ENSATEG00000005405	nom1	81	58.555	ENSODEG00000009399	NOM1	76	64.232	Octodon_degus
ENSATEG00000005405	nom1	94	77.792	ENSONIG00000005958	nom1	97	77.575	Oreochromis_niloticus
ENSATEG00000005405	nom1	57	67.387	ENSOANG00000006139	-	97	67.387	Ornithorhynchus_anatinus
ENSATEG00000005405	nom1	96	45.765	ENSOCUG00000021448	-	87	53.986	Oryctolagus_cuniculus
ENSATEG00000005405	nom1	98	56.159	ENSOCUG00000004071	-	84	59.129	Oryctolagus_cuniculus
ENSATEG00000005405	nom1	100	73.540	ENSORLG00000010541	nom1	100	72.586	Oryzias_latipes
ENSATEG00000005405	nom1	93	73.813	ENSORLG00020010789	nom1	99	72.927	Oryzias_latipes_hni
ENSATEG00000005405	nom1	100	72.889	ENSORLG00015010475	nom1	99	72.280	Oryzias_latipes_hsok
ENSATEG00000005405	nom1	100	73.728	ENSOMEG00000004219	nom1	100	72.749	Oryzias_melastigma
ENSATEG00000005405	nom1	65	67.598	ENSOGAG00000001124	NOM1	89	66.850	Otolemur_garnettii
ENSATEG00000005405	nom1	81	57.416	ENSOARG00000007261	NOM1	98	54.945	Ovis_aries
ENSATEG00000005405	nom1	98	53.855	ENSPPAG00000041374	NOM1	80	60.029	Pan_paniscus
ENSATEG00000005405	nom1	81	58.671	ENSPTIG00000013532	NOM1	75	63.849	Panthera_tigris_altaica
ENSATEG00000005405	nom1	98	54.699	ENSPTRG00000019917	NOM1	80	60.492	Pan_troglodytes
ENSATEG00000005405	nom1	98	54.862	ENSPANG00000007605	NOM1	80	60.694	Papio_anubis
ENSATEG00000005405	nom1	100	61.740	ENSPKIG00000005825	nom1	100	61.348	Paramormyrops_kingsleyae
ENSATEG00000005405	nom1	69	65.378	ENSPSIG00000017848	NOM1	90	67.463	Pelodiscus_sinensis
ENSATEG00000005405	nom1	100	73.358	ENSPMGG00000002577	nom1	100	73.716	Periophthalmus_magnuspinnatus
ENSATEG00000005405	nom1	97	54.712	ENSPEMG00000024180	Nom1	81	59.379	Peromyscus_maniculatus_bairdii
ENSATEG00000005405	nom1	99	52.908	ENSPCIG00000027941	NOM1	78	60.112	Phascolarctos_cinereus
ENSATEG00000005405	nom1	99	74.377	ENSPFOG00000015771	nom1	99	75.181	Poecilia_formosa
ENSATEG00000005405	nom1	65	85.902	ENSPLAG00000007856	nom1	99	75.776	Poecilia_latipinna
ENSATEG00000005405	nom1	99	75.357	ENSPMEG00000014155	nom1	99	76.149	Poecilia_mexicana
ENSATEG00000005405	nom1	98	76.103	ENSPREG00000008850	nom1	98	76.348	Poecilia_reticulata
ENSATEG00000005405	nom1	98	51.377	ENSPPYG00000018222	NOM1	84	54.309	Pongo_abelii
ENSATEG00000005405	nom1	84	61.949	ENSPCAG00000000440	NOM1	65	62.093	Procavia_capensis
ENSATEG00000005405	nom1	64	65.966	ENSPCOG00000015222	NOM1	99	65.844	Propithecus_coquereli
ENSATEG00000005405	nom1	97	52.791	ENSPVAG00000014760	NOM1	79	58.515	Pteropus_vampyrus
ENSATEG00000005405	nom1	100	75.566	ENSPNYG00000006975	nom1	96	87.030	Pundamilia_nyererei
ENSATEG00000005405	nom1	68	72.924	ENSPNAG00000011085	nom1	62	73.042	Pygocentrus_nattereri
ENSATEG00000005405	nom1	97	52.404	ENSRNOG00000048969	AABR07059041.1	87	55.205	Rattus_norvegicus
ENSATEG00000005405	nom1	98	54.970	ENSRBIG00000037042	NOM1	85	57.838	Rhinopithecus_bieti
ENSATEG00000005405	nom1	98	54.241	ENSRROG00000037293	NOM1	85	57.568	Rhinopithecus_roxellana
ENSATEG00000005405	nom1	81	61.869	ENSSHAG00000017998	-	99	61.877	Sarcophilus_harrisii
ENSATEG00000005405	nom1	50	62.470	ENSSHAG00000002835	-	99	62.470	Sarcophilus_harrisii
ENSATEG00000005405	nom1	60	72.428	ENSSFOG00015003196	nom1	100	72.428	Scleropages_formosus
ENSATEG00000005405	nom1	100	78.225	ENSSMAG00000011047	nom1	98	77.831	Scophthalmus_maximus
ENSATEG00000005405	nom1	98	80.505	ENSSDUG00000006834	nom1	66	88.689	Seriola_dumerili
ENSATEG00000005405	nom1	98	80.169	ENSSLDG00000021812	nom1	98	81.016	Seriola_lalandi_dorsalis
ENSATEG00000005405	nom1	85	49.118	ENSSPUG00000002556	NOM1	100	67.143	Sphenodon_punctatus
ENSATEG00000005405	nom1	98	78.706	ENSSPAG00000000953	nom1	61	89.905	Stegastes_partitus
ENSATEG00000005405	nom1	81	57.514	ENSTGUG00000000702	-	76	66.979	Taeniopygia_guttata
ENSATEG00000005405	nom1	98	72.039	ENSTRUG00000010239	nom1	100	72.749	Takifugu_rubripes
ENSATEG00000005405	nom1	98	71.677	ENSTNIG00000012783	nom1	100	71.731	Tetraodon_nigroviridis
ENSATEG00000005405	nom1	95	52.479	ENSTTRG00000009691	NOM1	64	64.890	Tursiops_truncatus
ENSATEG00000005405	nom1	81	59.124	ENSUAMG00000025450	NOM1	79	58.646	Ursus_americanus
ENSATEG00000005405	nom1	81	60.746	ENSUMAG00000014275	NOM1	96	60.624	Ursus_maritimus
ENSATEG00000005405	nom1	74	68.203	ENSVVUG00000002608	NOM1	80	68.203	Vulpes_vulpes
ENSATEG00000005405	nom1	88	55.851	ENSXETG00000021611	nom1	82	73.659	Xenopus_tropicalis
ENSATEG00000005405	nom1	98	74.939	ENSXMAG00000002451	nom1	98	75.676	Xiphophorus_maculatus