EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000005583 (Gene tree)
Gene ID: 113162797
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 4822 bases
Position: chrOOHO01000004.1:11722103-11726924
Accession: 113162797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000007961	RNA_ligase	PF09414.10	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000008088	-	3620	XM_026361002	ENSATEP00000007961	910 (aa)	XP_026216787	UPI000E465E4C

Gene Model

Click here to download ENSATEG00000005583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000005583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000005583	lig4	99	66.189	ENSG00000174405	LIG4	100	66.825	Homo_sapiens
ENSATEG00000005583	lig4	100	90.110	ENSAPOG00000000866	lig4	100	90.110	Acanthochromis_polyacanthus
ENSATEG00000005583	lig4	99	64.693	ENSAMEG00000019685	LIG4	99	64.474	Ailuropoda_melanoleuca
ENSATEG00000005583	lig4	99	89.648	ENSACIG00000018309	lig4	99	89.648	Amphilophus_citrinellus
ENSATEG00000005583	lig4	100	89.780	ENSAOCG00000011768	lig4	100	89.780	Amphiprion_ocellaris
ENSATEG00000005583	lig4	100	90.000	ENSAPEG00000017815	lig4	100	90.000	Amphiprion_percula
ENSATEG00000005583	lig4	96	67.123	ENSAPLG00000001673	LIG4	99	67.123	Anas_platyrhynchos
ENSATEG00000005583	lig4	99	67.072	ENSACAG00000014566	LIG4	99	67.072	Anolis_carolinensis
ENSATEG00000005583	lig4	99	65.495	ENSANAG00000012446	LIG4	99	65.385	Aotus_nancymaae
ENSATEG00000005583	lig4	99	88.106	ENSACLG00000027051	lig4	99	88.106	Astatotilapia_calliptera
ENSATEG00000005583	lig4	99	79.891	ENSAMXG00000008192	lig4	95	79.891	Astyanax_mexicanus
ENSATEG00000005583	lig4	99	64.835	ENSBTAG00000015868	LIG4	99	64.725	Bos_taurus
ENSATEG00000005583	lig4	99	65.165	ENSCJAG00000014689	LIG4	99	65.055	Callithrix_jacchus
ENSATEG00000005583	lig4	99	65.414	ENSCAFG00000006031	LIG4	99	65.193	Canis_familiaris
ENSATEG00000005583	lig4	99	65.414	ENSCAFG00020021230	LIG4	99	65.193	Canis_lupus_dingo
ENSATEG00000005583	lig4	99	64.615	ENSCHIG00000001019	LIG4	99	64.505	Capra_hircus
ENSATEG00000005583	lig4	99	64.895	ENSCAPG00000006284	LIG4	99	64.784	Cavia_aperea
ENSATEG00000005583	lig4	99	64.396	ENSCPOG00000014266	LIG4	99	64.286	Cavia_porcellus
ENSATEG00000005583	lig4	99	65.714	ENSCCAG00000019971	LIG4	99	65.604	Cebus_capucinus
ENSATEG00000005583	lig4	99	65.385	ENSCATG00000021075	LIG4	99	65.275	Cercocebus_atys
ENSATEG00000005583	lig4	99	65.165	ENSCLAG00000003376	LIG4	99	65.055	Chinchilla_lanigera
ENSATEG00000005583	lig4	99	65.275	ENSCSAG00000000211	LIG4	99	65.165	Chlorocebus_sabaeus
ENSATEG00000005583	lig4	99	68.882	ENSCPBG00000023291	LIG4	100	68.415	Chrysemys_picta_bellii
ENSATEG00000005583	lig4	71	47.473	ENSCING00000009536	-	99	47.473	Ciona_intestinalis
ENSATEG00000005583	lig4	83	45.263	ENSCSAVG00000010336	-	98	45.263	Ciona_savignyi
ENSATEG00000005583	lig4	99	65.165	ENSCANG00000005805	LIG4	99	65.055	Colobus_angolensis_palliatus
ENSATEG00000005583	lig4	99	64.796	ENSCGRG00001012072	Lig4	99	64.796	Cricetulus_griseus_chok1gshd
ENSATEG00000005583	lig4	99	64.796	ENSCGRG00000013417	Lig4	99	64.796	Cricetulus_griseus_crigri
ENSATEG00000005583	lig4	97	85.569	ENSCSEG00000013905	lig4	96	85.569	Cynoglossus_semilaevis
ENSATEG00000005583	lig4	100	88.474	ENSCVAG00000007896	lig4	100	88.474	Cyprinodon_variegatus
ENSATEG00000005583	lig4	100	79.231	ENSDARG00000060620	lig4	100	79.231	Danio_rerio
ENSATEG00000005583	lig4	99	64.984	ENSDNOG00000000513	LIG4	99	64.764	Dasypus_novemcinctus
ENSATEG00000005583	lig4	99	65.708	ENSDORG00000027303	Lig4	99	65.597	Dipodomys_ordii
ENSATEG00000005583	lig4	83	32.707	FBgn0030506	Lig4	85	32.832	Drosophila_melanogaster
ENSATEG00000005583	lig4	98	63.415	ENSETEG00000015563	LIG4	100	63.747	Echinops_telfairi
ENSATEG00000005583	lig4	98	45.387	ENSEBUG00000014243	lig4	98	44.857	Eptatretus_burgeri
ENSATEG00000005583	lig4	99	64.835	ENSEASG00005022073	LIG4	99	64.725	Equus_asinus_asinus
ENSATEG00000005583	lig4	99	64.764	ENSECAG00000003257	LIG4	99	64.796	Equus_caballus
ENSATEG00000005583	lig4	99	83.407	ENSELUG00000006787	lig4	99	83.516	Esox_lucius
ENSATEG00000005583	lig4	99	64.823	ENSFCAG00000031985	LIG4	99	64.602	Felis_catus
ENSATEG00000005583	lig4	89	68.897	ENSFALG00000004214	LIG4	98	68.897	Ficedula_albicollis
ENSATEG00000005583	lig4	99	64.207	ENSFDAG00000008973	LIG4	99	64.097	Fukomys_damarensis
ENSATEG00000005583	lig4	100	87.816	ENSFHEG00000007398	lig4	91	87.816	Fundulus_heteroclitus
ENSATEG00000005583	lig4	85	79.359	ENSGMOG00000012843	lig4	99	79.359	Gadus_morhua
ENSATEG00000005583	lig4	100	65.899	ENSGALG00000016854	LIG4	100	65.570	Gallus_gallus
ENSATEG00000005583	lig4	99	87.061	ENSGAFG00000019779	lig4	96	87.500	Gambusia_affinis
ENSATEG00000005583	lig4	100	85.055	ENSGACG00000014135	lig4	99	85.055	Gasterosteus_aculeatus
ENSATEG00000005583	lig4	99	65.969	ENSGGOG00000027771	LIG4	99	65.859	Gorilla_gorilla
ENSATEG00000005583	lig4	99	87.885	ENSHBUG00000006245	lig4	99	87.885	Haplochromis_burtoni
ENSATEG00000005583	lig4	99	64.505	ENSHGLG00000000718	LIG4	99	64.396	Heterocephalus_glaber_female
ENSATEG00000005583	lig4	99	64.505	ENSHGLG00100003265	LIG4	99	64.396	Heterocephalus_glaber_male
ENSATEG00000005583	lig4	100	83.133	ENSHCOG00000012010	lig4	100	83.133	Hippocampus_comes
ENSATEG00000005583	lig4	100	79.121	ENSIPUG00000013748	lig4	100	79.121	Ictalurus_punctatus
ENSATEG00000005583	lig4	99	64.945	ENSSTOG00000024303	LIG4	99	64.835	Ictidomys_tridecemlineatus
ENSATEG00000005583	lig4	99	64.868	ENSJJAG00000006750	Lig4	99	64.648	Jaculus_jaculus
ENSATEG00000005583	lig4	99	85.573	ENSKMAG00000001149	lig4	99	85.573	Kryptolebias_marmoratus
ENSATEG00000005583	lig4	91	89.601	ENSLBEG00000014578	lig4	100	89.601	Labrus_bergylta
ENSATEG00000005583	lig4	100	68.969	ENSLACG00000003282	LIG4	100	68.969	Latimeria_chalumnae
ENSATEG00000005583	lig4	100	74.042	ENSLOCG00000008901	lig4	99	74.042	Lepisosteus_oculatus
ENSATEG00000005583	lig4	99	64.751	ENSLAFG00000031152	LIG4	99	64.751	Loxodonta_africana
ENSATEG00000005583	lig4	99	65.385	ENSMFAG00000037235	LIG4	99	65.275	Macaca_fascicularis
ENSATEG00000005583	lig4	99	65.275	ENSMMUG00000008874	LIG4	99	65.165	Macaca_mulatta
ENSATEG00000005583	lig4	99	65.385	ENSMNEG00000023575	LIG4	99	65.275	Macaca_nemestrina
ENSATEG00000005583	lig4	99	65.165	ENSMLEG00000026720	LIG4	99	65.055	Mandrillus_leucophaeus
ENSATEG00000005583	lig4	100	90.659	ENSMAMG00000008472	lig4	99	90.659	Mastacembelus_armatus
ENSATEG00000005583	lig4	99	88.106	ENSMZEG00005001855	lig4	99	88.106	Maylandia_zebra
ENSATEG00000005583	lig4	100	65.789	ENSMGAG00000015532	LIG4	100	65.461	Meleagris_gallopavo
ENSATEG00000005583	lig4	99	63.877	ENSMOCG00000019000	Lig4	99	63.877	Microtus_ochrogaster
ENSATEG00000005583	lig4	100	88.132	ENSMMOG00000004390	lig4	100	88.132	Mola_mola
ENSATEG00000005583	lig4	99	65.789	ENSMODG00000025064	LIG4	99	65.680	Monodelphis_domestica
ENSATEG00000005583	lig4	100	89.780	ENSMALG00000008555	lig4	100	89.780	Monopterus_albus
ENSATEG00000005583	lig4	99	65.088	MGP_CAROLIEiJ_G0030809	Lig4	99	64.978	Mus_caroli
ENSATEG00000005583	lig4	99	65.308	ENSMUSG00000049717	Lig4	99	65.198	Mus_musculus
ENSATEG00000005583	lig4	99	65.198	MGP_PahariEiJ_G0021270	Lig4	99	65.198	Mus_pahari
ENSATEG00000005583	lig4	99	65.308	MGP_SPRETEiJ_G0031917	Lig4	99	65.198	Mus_spretus
ENSATEG00000005583	lig4	99	65.227	ENSMPUG00000018675	LIG4	99	65.006	Mustela_putorius_furo
ENSATEG00000005583	lig4	99	65.639	ENSMLUG00000001267	LIG4	99	65.529	Myotis_lucifugus
ENSATEG00000005583	lig4	98	65.632	ENSNGAG00000013258	Lig4	99	65.632	Nannospalax_galili
ENSATEG00000005583	lig4	99	87.996	ENSNBRG00000021252	lig4	99	87.996	Neolamprologus_brichardi
ENSATEG00000005583	lig4	99	65.529	ENSNLEG00000007888	LIG4	99	65.419	Nomascus_leucogenys
ENSATEG00000005583	lig4	99	63.987	ENSOPRG00000005765	LIG4	99	63.877	Ochotona_princeps
ENSATEG00000005583	lig4	99	64.176	ENSODEG00000019683	LIG4	99	64.066	Octodon_degus
ENSATEG00000005583	lig4	99	88.656	ENSONIG00000011969	lig4	98	88.656	Oreochromis_niloticus
ENSATEG00000005583	lig4	99	64.725	ENSOCUG00000015734	LIG4	99	64.615	Oryctolagus_cuniculus
ENSATEG00000005583	lig4	99	84.268	ENSORLG00000004041	lig4	99	84.488	Oryzias_latipes
ENSATEG00000005583	lig4	99	84.268	ENSORLG00020019607	lig4	99	84.488	Oryzias_latipes_hni
ENSATEG00000005583	lig4	99	84.488	ENSORLG00015017754	lig4	99	84.708	Oryzias_latipes_hsok
ENSATEG00000005583	lig4	75	90.233	ENSOMEG00000003459	lig4	99	90.233	Oryzias_melastigma
ENSATEG00000005583	lig4	99	64.945	ENSOGAG00000032120	LIG4	99	64.835	Otolemur_garnettii
ENSATEG00000005583	lig4	82	68.952	ENSOARG00000005590	LIG4	98	68.952	Ovis_aries
ENSATEG00000005583	lig4	99	65.969	ENSPPAG00000032998	LIG4	99	65.859	Pan_paniscus
ENSATEG00000005583	lig4	99	65.265	ENSPPRG00000017804	LIG4	99	65.044	Panthera_pardus
ENSATEG00000005583	lig4	99	65.155	ENSPTIG00000010051	LIG4	99	64.934	Panthera_tigris_altaica
ENSATEG00000005583	lig4	99	66.079	ENSPTRG00000006025	LIG4	99	65.969	Pan_troglodytes
ENSATEG00000005583	lig4	99	65.495	ENSPANG00000007562	LIG4	99	65.385	Papio_anubis
ENSATEG00000005583	lig4	100	78.618	ENSPKIG00000011645	lig4	99	78.618	Paramormyrops_kingsleyae
ENSATEG00000005583	lig4	99	68.102	ENSPSIG00000001504	LIG4	99	67.881	Pelodiscus_sinensis
ENSATEG00000005583	lig4	98	81.544	ENSPMGG00000013486	lig4	99	80.837	Periophthalmus_magnuspinnatus
ENSATEG00000005583	lig4	99	64.686	ENSPEMG00000000076	Lig4	99	64.686	Peromyscus_maniculatus_bairdii
ENSATEG00000005583	lig4	99	65.532	ENSPCIG00000021882	LIG4	99	65.423	Phascolarctos_cinereus
ENSATEG00000005583	lig4	100	88.268	ENSPFOG00000000797	lig4	100	88.596	Poecilia_formosa
ENSATEG00000005583	lig4	100	88.158	ENSPLAG00000001196	lig4	100	88.487	Poecilia_latipinna
ENSATEG00000005583	lig4	100	88.158	ENSPMEG00000021353	lig4	100	88.596	Poecilia_mexicana
ENSATEG00000005583	lig4	100	87.610	ENSPREG00000007323	lig4	100	88.048	Poecilia_reticulata
ENSATEG00000005583	lig4	99	65.165	ENSPPYG00000005540	LIG4	99	65.055	Pongo_abelii
ENSATEG00000005583	lig4	99	64.835	ENSPVAG00000016403	LIG4	99	64.725	Pteropus_vampyrus
ENSATEG00000005583	lig4	99	88.106	ENSPNYG00000009660	lig4	99	88.106	Pundamilia_nyererei
ENSATEG00000005583	lig4	98	82.071	ENSPNAG00000028069	LIG4	99	82.071	Pygocentrus_nattereri
ENSATEG00000005583	lig4	98	82.071	ENSPNAG00000028056	lig4	99	82.071	Pygocentrus_nattereri
ENSATEG00000005583	lig4	99	64.978	ENSRNOG00000014605	Lig4	99	64.978	Rattus_norvegicus
ENSATEG00000005583	lig4	99	64.725	ENSRBIG00000039962	LIG4	99	64.615	Rhinopithecus_bieti
ENSATEG00000005583	lig4	99	65.385	ENSRROG00000006040	LIG4	99	65.275	Rhinopithecus_roxellana
ENSATEG00000005583	lig4	99	65.165	ENSSBOG00000019029	LIG4	99	65.055	Saimiri_boliviensis_boliviensis
ENSATEG00000005583	lig4	99	63.117	ENSSHAG00000009525	LIG4	99	63.337	Sarcophilus_harrisii
ENSATEG00000005583	lig4	100	79.276	ENSSFOG00015012835	lig4	100	79.276	Scleropages_formosus
ENSATEG00000005583	lig4	100	84.066	ENSSMAG00000011267	lig4	100	84.066	Scophthalmus_maximus
ENSATEG00000005583	lig4	100	89.716	ENSSDUG00000010343	lig4	100	89.716	Seriola_dumerili
ENSATEG00000005583	lig4	100	88.512	ENSSLDG00000003239	lig4	100	88.731	Seriola_lalandi_dorsalis
ENSATEG00000005583	lig4	99	64.790	ENSSARG00000006573	LIG4	99	64.570	Sorex_araneus
ENSATEG00000005583	lig4	92	69.167	ENSSPUG00000002444	LIG4	100	69.048	Sphenodon_punctatus
ENSATEG00000005583	lig4	100	89.560	ENSSPAG00000001609	lig4	100	89.560	Stegastes_partitus
ENSATEG00000005583	lig4	99	65.237	ENSSSCG00000009540	LIG4	99	65.017	Sus_scrofa
ENSATEG00000005583	lig4	99	66.444	ENSTGUG00000010795	LIG4	99	66.444	Taeniopygia_guttata
ENSATEG00000005583	lig4	100	87.143	ENSTRUG00000009984	lig4	100	87.143	Takifugu_rubripes
ENSATEG00000005583	lig4	100	83.516	ENSTNIG00000010348	lig4	100	83.736	Tetraodon_nigroviridis
ENSATEG00000005583	lig4	99	65.495	ENSTBEG00000017741	LIG4	99	65.639	Tupaia_belangeri
ENSATEG00000005583	lig4	99	65.121	ENSTTRG00000012660	LIG4	99	65.011	Tursiops_truncatus
ENSATEG00000005583	lig4	99	64.784	ENSUAMG00000003773	LIG4	99	64.563	Ursus_americanus
ENSATEG00000005583	lig4	99	69.034	ENSXETG00000002654	lig4	99	69.034	Xenopus_tropicalis
ENSATEG00000005583	lig4	100	87.939	ENSXCOG00000017401	lig4	100	87.829	Xiphophorus_couchianus
ENSATEG00000005583	lig4	100	88.268	ENSXMAG00000015142	lig4	99	88.158	Xiphophorus_maculatus