EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000005608 (Gene tree)
Gene ID: 113154400
Gene Symbol: chd6
Alias: si:dkey-6e2.3|zmp:0000000556
Full Name: chromodomain-helicase-DNA-binding protein 6-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 56306 bases
Position: chrOOHO01000017.1:20017186-20073491
Accession: 113154400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000007997	ResIII	PF04851.15	6.8e-07	1	1
ENSATEP00000007988	ResIII	PF04851.15	7.5e-07	1	1
ENSATEP00000007997	BRK	PF07533.16	6.1e-18	1	1
ENSATEP00000007988	BRK	PF07533.16	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000008124	-	10088	-	ENSATEP00000007997	3355 (aa)	-	-
ENSATET00000008115	-	10718	-	ENSATEP00000007988	3565 (aa)	XP_026204373	UPI000E45A7A6

Gene Model

Click here to download ENSATEG00000005608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000005608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000005608	chd6	55	76.667	ENSATEG00000002748	chd9	64	76.667
ENSATEG00000005608	chd6	54	66.182	ENSATEG00000002590	chd7	76	66.301
ENSATEG00000005608	chd6	50	55.748	ENSATEG00000007108	chd8	65	55.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000005608	chd6	62	77.464	ENSG00000124177	CHD6	99	81.853	Homo_sapiens
ENSATEG00000005608	chd6	99	84.866	ENSAPOG00000013736	chd6	99	83.954	Acanthochromis_polyacanthus
ENSATEG00000005608	chd6	63	76.356	ENSAMEG00000009496	CHD6	74	76.222	Ailuropoda_melanoleuca
ENSATEG00000005608	chd6	63	77.854	ENSAPLG00000015592	CHD6	78	73.022	Anas_platyrhynchos
ENSATEG00000005608	chd6	65	69.980	ENSACAG00000006842	CHD6	76	69.054	Anolis_carolinensis
ENSATEG00000005608	chd6	62	77.257	ENSANAG00000037548	CHD6	99	82.051	Aotus_nancymaae
ENSATEG00000005608	chd6	78	71.345	ENSAMXG00000009576	chd6	92	67.646	Astyanax_mexicanus
ENSATEG00000005608	chd6	64	75.618	ENSBTAG00000005733	CHD6	72	75.729	Bos_taurus
ENSATEG00000005608	chd6	62	77.188	ENSCJAG00000017920	CHD6	99	81.868	Callithrix_jacchus
ENSATEG00000005608	chd6	67	71.280	ENSCAFG00000009236	CHD6	74	76.035	Canis_familiaris
ENSATEG00000005608	chd6	67	71.037	ENSCAFG00020012906	CHD6	95	84.586	Canis_lupus_dingo
ENSATEG00000005608	chd6	64	75.551	ENSCHIG00000017606	CHD6	72	75.663	Capra_hircus
ENSATEG00000005608	chd6	56	77.508	ENSTSYG00000014635	CHD6	77	76.830	Carlito_syrichta
ENSATEG00000005608	chd6	64	75.597	ENSCPOG00000015641	CHD6	74	75.464	Cavia_porcellus
ENSATEG00000005608	chd6	62	77.326	ENSCCAG00000036828	CHD6	99	82.051	Cebus_capucinus
ENSATEG00000005608	chd6	62	76.944	ENSCATG00000039248	CHD6	99	82.051	Cercocebus_atys
ENSATEG00000005608	chd6	71	67.665	ENSCLAG00000013743	CHD6	74	75.729	Chinchilla_lanigera
ENSATEG00000005608	chd6	62	77.395	ENSCSAG00000013997	CHD6	74	75.381	Chlorocebus_sabaeus
ENSATEG00000005608	chd6	55	74.204	ENSCHOG00000012647	CHD6	65	73.709	Choloepus_hoffmanni
ENSATEG00000005608	chd6	64	76.592	ENSCPBG00000019382	CHD6	81	72.800	Chrysemys_picta_bellii
ENSATEG00000005608	chd6	62	77.395	ENSCANG00000043435	CHD6	99	82.051	Colobus_angolensis_palliatus
ENSATEG00000005608	chd6	63	75.486	ENSCGRG00001002694	Chd6	74	75.300	Cricetulus_griseus_chok1gshd
ENSATEG00000005608	chd6	84	70.069	ENSDARG00000017244	chd6	95	66.376	Danio_rerio
ENSATEG00000005608	chd6	62	77.220	ENSDNOG00000004176	CHD6	74	76.035	Dasypus_novemcinctus
ENSATEG00000005608	chd6	61	81.970	ENSEASG00005023433	CHD6	95	86.127	Equus_asinus_asinus
ENSATEG00000005608	chd6	62	77.739	ENSECAG00000011761	CHD6	74	75.830	Equus_caballus
ENSATEG00000005608	chd6	62	77.726	ENSELUG00000012309	chd6	94	77.143	Esox_lucius
ENSATEG00000005608	chd6	67	71.341	ENSFCAG00000003572	CHD6	75	75.495	Felis_catus
ENSATEG00000005608	chd6	59	83.673	ENSFALG00000012563	CHD6	69	73.379	Ficedula_albicollis
ENSATEG00000005608	chd6	64	75.663	ENSFDAG00000013791	CHD6	74	75.531	Fukomys_damarensis
ENSATEG00000005608	chd6	62	77.622	ENSGMOG00000011715	chd6	86	83.492	Gadus_morhua
ENSATEG00000005608	chd6	76	84.269	ENSGACG00000000037	chd6	97	80.432	Gasterosteus_aculeatus
ENSATEG00000005608	chd6	62	77.464	ENSGGOG00000013123	CHD6	99	82.051	Gorilla_gorilla
ENSATEG00000005608	chd6	99	84.528	ENSHBUG00000014701	chd6	99	84.662	Haplochromis_burtoni
ENSATEG00000005608	chd6	71	67.819	ENSHGLG00000004548	CHD6	78	72.122	Heterocephalus_glaber_female
ENSATEG00000005608	chd6	71	67.819	ENSHGLG00100006401	CHD6	78	72.122	Heterocephalus_glaber_male
ENSATEG00000005608	chd6	77	80.299	ENSIPUG00000003692	chd6	86	80.299	Ictalurus_punctatus
ENSATEG00000005608	chd6	64	75.931	ENSSTOG00000013382	CHD6	74	75.381	Ictidomys_tridecemlineatus
ENSATEG00000005608	chd6	59	78.252	ENSLACG00000010881	CHD6	74	76.474	Latimeria_chalumnae
ENSATEG00000005608	chd6	62	79.870	ENSLOCG00000007386	chd6	81	76.067	Lepisosteus_oculatus
ENSATEG00000005608	chd6	62	77.395	ENSLAFG00000012144	CHD6	79	72.422	Loxodonta_africana
ENSATEG00000005608	chd6	62	77.395	ENSMFAG00000032830	CHD6	99	82.051	Macaca_fascicularis
ENSATEG00000005608	chd6	62	77.395	ENSMMUG00000020458	CHD6	99	82.051	Macaca_mulatta
ENSATEG00000005608	chd6	62	77.395	ENSMNEG00000040847	CHD6	99	82.051	Macaca_nemestrina
ENSATEG00000005608	chd6	62	77.395	ENSMLEG00000031965	CHD6	99	82.051	Mandrillus_leucophaeus
ENSATEG00000005608	chd6	99	87.660	ENSMAMG00000013111	chd6	99	87.696	Mastacembelus_armatus
ENSATEG00000005608	chd6	63	76.096	ENSMGAG00000001121	CHD6	79	71.526	Meleagris_gallopavo
ENSATEG00000005608	chd6	62	77.395	ENSMICG00000016641	CHD6	99	81.868	Microcebus_murinus
ENSATEG00000005608	chd6	61	78.194	ENSMODG00000000720	-	78	78.120	Monodelphis_domestica
ENSATEG00000005608	chd6	65	73.393	MGP_CAROLIEiJ_G0024604	Chd6	89	79.981	Mus_caroli
ENSATEG00000005608	chd6	68	71.930	ENSMUSG00000057133	Chd6	89	80.169	Mus_musculus
ENSATEG00000005608	chd6	68	71.930	MGP_PahariEiJ_G0026048	Chd6	85	83.185	Mus_pahari
ENSATEG00000005608	chd6	66	71.597	MGP_SPRETEiJ_G0025526	Chd6	89	80.169	Mus_spretus
ENSATEG00000005608	chd6	63	75.681	ENSMPUG00000017695	CHD6	74	75.564	Mustela_putorius_furo
ENSATEG00000005608	chd6	62	77.326	ENSMLUG00000016247	CHD6	72	75.480	Myotis_lucifugus
ENSATEG00000005608	chd6	85	85.049	ENSNBRG00000013839	chd6	99	81.848	Neolamprologus_brichardi
ENSATEG00000005608	chd6	62	76.017	ENSNLEG00000006496	CHD6	74	74.402	Nomascus_leucogenys
ENSATEG00000005608	chd6	71	66.307	ENSOPRG00000013376	-	74	73.232	Ochotona_princeps
ENSATEG00000005608	chd6	81	93.057	ENSONIG00000000393	chd6	95	93.057	Oreochromis_niloticus
ENSATEG00000005608	chd6	55	74.206	ENSOANG00000014347	CHD6	63	74.011	Ornithorhynchus_anatinus
ENSATEG00000005608	chd6	62	77.464	ENSOCUG00000012394	CHD6	74	75.733	Oryctolagus_cuniculus
ENSATEG00000005608	chd6	99	72.484	ENSORLG00020021891	chd6	95	94.589	Oryzias_latipes_hni
ENSATEG00000005608	chd6	62	76.728	ENSOGAG00000002427	CHD6	72	75.449	Otolemur_garnettii
ENSATEG00000005608	chd6	66	71.026	ENSOARG00000002597	CHD6	71	74.800	Ovis_aries
ENSATEG00000005608	chd6	67	71.402	ENSPPRG00000014756	CHD6	75	75.561	Panthera_pardus
ENSATEG00000005608	chd6	67	71.220	ENSPTIG00000011094	CHD6	75	75.363	Panthera_tigris_altaica
ENSATEG00000005608	chd6	62	77.464	ENSPTRG00000013504	CHD6	99	82.051	Pan_troglodytes
ENSATEG00000005608	chd6	62	77.395	ENSPANG00000025554	CHD6	99	82.051	Papio_anubis
ENSATEG00000005608	chd6	74	72.953	ENSPKIG00000005578	chd6	85	73.222	Paramormyrops_kingsleyae
ENSATEG00000005608	chd6	77	80.221	ENSPMGG00000014877	chd6	96	78.970	Periophthalmus_magnuspinnatus
ENSATEG00000005608	chd6	64	75.947	ENSPCIG00000028037	CHD6	78	72.461	Phascolarctos_cinereus
ENSATEG00000005608	chd6	97	76.804	ENSPLAG00000003128	chd6	99	75.791	Poecilia_latipinna
ENSATEG00000005608	chd6	97	76.533	ENSPREG00000022653	chd6	99	95.055	Poecilia_reticulata
ENSATEG00000005608	chd6	62	77.395	ENSPPYG00000011016	CHD6	74	75.464	Pongo_abelii
ENSATEG00000005608	chd6	62	77.113	ENSPCOG00000001089	CHD6	99	82.051	Propithecus_coquereli
ENSATEG00000005608	chd6	85	85.214	ENSPNYG00000022516	chd6	99	83.737	Pundamilia_nyererei
ENSATEG00000005608	chd6	77	73.079	ENSPNAG00000012825	chd6	86	72.595	Pygocentrus_nattereri
ENSATEG00000005608	chd6	69	68.213	ENSRNOG00000016744	Chd6	74	74.602	Rattus_norvegicus
ENSATEG00000005608	chd6	62	77.395	ENSSBOG00000022089	CHD6	99	82.051	Saimiri_boliviensis_boliviensis
ENSATEG00000005608	chd6	64	75.894	ENSSHAG00000017072	CHD6	74	75.495	Sarcophilus_harrisii
ENSATEG00000005608	chd6	77	68.624	ENSSFOG00015012920	chd6	88	87.976	Scleropages_formosus
ENSATEG00000005608	chd6	63	77.739	ENSSSCG00000007360	CHD6	72	75.645	Sus_scrofa
ENSATEG00000005608	chd6	66	74.502	ENSTGUG00000003179	CHD6	81	73.483	Taeniopygia_guttata
ENSATEG00000005608	chd6	78	84.530	ENSTNIG00000017487	chd6	99	84.337	Tetraodon_nigroviridis
ENSATEG00000005608	chd6	61	78.904	ENSTTRG00000013438	CHD6	76	75.076	Tursiops_truncatus
ENSATEG00000005608	chd6	68	76.779	ENSUAMG00000024036	CHD6	95	84.586	Ursus_americanus
ENSATEG00000005608	chd6	63	76.289	ENSUMAG00000002017	CHD6	95	84.586	Ursus_maritimus
ENSATEG00000005608	chd6	58	71.981	ENSVPAG00000007941	CHD6	69	80.208	Vicugna_pacos
ENSATEG00000005608	chd6	67	71.280	ENSVVUG00000029164	CHD6	74	74.499	Vulpes_vulpes
ENSATEG00000005608	chd6	64	69.162	ENSXETG00000021445	chd6	79	65.269	Xenopus_tropicalis