EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000005627 (Gene tree)
Gene ID: 113168025
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 25542 bases
Position: chrOOHO01000023.1:7116108-7141649
Accession: 113168025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000008007	RRM_5	PF13893.6	9.5e-08	1	2
ENSATEP00000008007	RRM_5	PF13893.6	9.5e-08	2	2
ENSATEP00000008027	RRM_5	PF13893.6	7.3e-07	1	2
ENSATEP00000008027	RRM_5	PF13893.6	7.3e-07	2	2
ENSATEP00000008007	RRM_1	PF00076.22	1.6e-40	1	3
ENSATEP00000008007	RRM_1	PF00076.22	1.6e-40	2	3
ENSATEP00000008007	RRM_1	PF00076.22	1.6e-40	3	3
ENSATEP00000008027	RRM_1	PF00076.22	8.1e-27	1	2
ENSATEP00000008027	RRM_1	PF00076.22	8.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000008154	-	13075	-	ENSATEP00000008027	3307 (aa)	-	-
ENSATET00000008134	-	13275	XM_026369058	ENSATEP00000008007	3533 (aa)	XP_026224843	UPI000E45BD84

Gene Model

Click here to download ENSATEG00000005627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000005627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000005627	-	97	79.679	ENSATEG00000007674	si:ch1073-335m2.2	99	80.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000005627	-	90	49.632	ENSG00000065526	SPEN	96	82.584	Homo_sapiens
ENSATEG00000005627	-	100	84.119	ENSAPOG00000009853	-	98	96.721	Acanthochromis_polyacanthus
ENSATEG00000005627	-	98	79.679	ENSAPOG00000011411	si:ch1073-335m2.2	100	79.679	Acanthochromis_polyacanthus
ENSATEG00000005627	-	99	46.560	ENSAMEG00000011817	SPEN	96	81.461	Ailuropoda_melanoleuca
ENSATEG00000005627	-	69	72.848	ENSAOCG00000008077	si:ch1073-335m2.2	99	72.848	Amphiprion_ocellaris
ENSATEG00000005627	-	100	84.227	ENSAOCG00000014505	-	100	84.058	Amphiprion_ocellaris
ENSATEG00000005627	-	95	78.125	ENSAPEG00000013515	si:ch1073-335m2.2	100	78.125	Amphiprion_percula
ENSATEG00000005627	-	100	83.979	ENSAPEG00000010288	-	100	83.810	Amphiprion_percula
ENSATEG00000005627	-	99	47.523	ENSAPLG00000012618	SPEN	99	79.470	Anas_platyrhynchos
ENSATEG00000005627	-	90	46.348	ENSACAG00000013761	SPEN	87	48.747	Anolis_carolinensis
ENSATEG00000005627	-	91	48.299	ENSANAG00000034428	SPEN	96	73.256	Aotus_nancymaae
ENSATEG00000005627	-	73	85.207	ENSACLG00000021433	si:ch1073-335m2.2	99	85.207	Astatotilapia_calliptera
ENSATEG00000005627	-	100	80.994	ENSACLG00000016922	-	100	80.966	Astatotilapia_calliptera
ENSATEG00000005627	-	100	55.611	ENSAMXG00000012485	spen	100	55.962	Astyanax_mexicanus
ENSATEG00000005627	-	99	46.242	ENSBTAG00000018729	SPEN	97	81.461	Bos_taurus
ENSATEG00000005627	-	89	49.896	ENSCJAG00000008527	SPEN	96	82.584	Callithrix_jacchus
ENSATEG00000005627	-	86	53.028	ENSCAFG00000016132	-	91	82.584	Canis_familiaris
ENSATEG00000005627	-	99	45.813	ENSCHIG00000025070	SPEN	98	82.584	Capra_hircus
ENSATEG00000005627	-	81	46.277	ENSTSYG00000036016	SPEN	96	43.680	Carlito_syrichta
ENSATEG00000005627	-	89	47.819	ENSCAPG00000013803	SPEN	97	79.470	Cavia_aperea
ENSATEG00000005627	-	89	47.781	ENSCPOG00000014036	SPEN	96	79.333	Cavia_porcellus
ENSATEG00000005627	-	89	43.985	ENSCCAG00000020258	SPEN	85	82.584	Cebus_capucinus
ENSATEG00000005627	-	88	47.946	ENSCLAG00000002018	SPEN	94	79.333	Chinchilla_lanigera
ENSATEG00000005627	-	90	49.857	ENSCSAG00000000841	SPEN	96	82.584	Chlorocebus_sabaeus
ENSATEG00000005627	-	100	47.541	ENSCPBG00000010477	SPEN	99	82.584	Chrysemys_picta_bellii
ENSATEG00000005627	-	89	47.970	ENSCANG00000034547	SPEN	86	73.256	Colobus_angolensis_palliatus
ENSATEG00000005627	-	91	48.148	ENSCGRG00001007725	Spen	97	83.146	Cricetulus_griseus_chok1gshd
ENSATEG00000005627	-	91	46.107	ENSCGRG00000010581	Spen	97	80.000	Cricetulus_griseus_crigri
ENSATEG00000005627	-	100	77.562	ENSCSEG00000003915	-	100	78.693	Cynoglossus_semilaevis
ENSATEG00000005627	-	100	75.344	ENSCVAG00000016346	-	100	75.512	Cyprinodon_variegatus
ENSATEG00000005627	-	94	73.810	ENSCVAG00000009075	si:ch1073-335m2.2	99	73.810	Cyprinodon_variegatus
ENSATEG00000005627	-	100	55.063	ENSDARG00000074245	spen	100	92.593	Danio_rerio
ENSATEG00000005627	-	97	74.129	ENSDARG00000074332	si:ch1073-335m2.2	94	74.129	Danio_rerio
ENSATEG00000005627	-	99	46.662	ENSDNOG00000041948	SPEN	96	83.146	Dasypus_novemcinctus
ENSATEG00000005627	-	90	47.321	ENSDORG00000023909	Spen	97	78.621	Dipodomys_ordii
ENSATEG00000005627	-	94	86.765	ENSEASG00005015911	SPEN	96	82.584	Equus_asinus_asinus
ENSATEG00000005627	-	94	86.765	ENSECAG00000008833	SPEN	96	82.584	Equus_caballus
ENSATEG00000005627	-	57	88.372	ENSEEUG00000010255	SPEN	58	88.372	Erinaceus_europaeus
ENSATEG00000005627	-	97	83.889	ENSELUG00000007726	si:ch1073-335m2.2	98	83.889	Esox_lucius
ENSATEG00000005627	-	87	45.847	ENSFALG00000003551	SPEN	100	45.716	Ficedula_albicollis
ENSATEG00000005627	-	93	47.802	ENSFDAG00000010212	SPEN	89	78.621	Fukomys_damarensis
ENSATEG00000005627	-	52	75.238	ENSFHEG00000004544	si:ch1073-335m2.2	99	79.651	Fundulus_heteroclitus
ENSATEG00000005627	-	91	75.377	ENSGMOG00000008156	si:ch1073-335m2.2	99	77.348	Gadus_morhua
ENSATEG00000005627	-	97	90.761	ENSGMOG00000008397	-	98	91.209	Gadus_morhua
ENSATEG00000005627	-	100	48.170	ENSGALG00000036932	SPEN	99	82.584	Gallus_gallus
ENSATEG00000005627	-	98	75.000	ENSGAFG00000021570	si:ch1073-335m2.2	99	80.233	Gambusia_affinis
ENSATEG00000005627	-	100	76.595	ENSGAFG00000015819	-	88	96.648	Gambusia_affinis
ENSATEG00000005627	-	100	41.951	ENSGACG00000001176	si:ch1073-335m2.2	70	80.814	Gasterosteus_aculeatus
ENSATEG00000005627	-	100	77.242	ENSGACG00000005341	-	100	77.578	Gasterosteus_aculeatus
ENSATEG00000005627	-	100	48.722	ENSGAGG00000020785	SPEN	99	82.584	Gopherus_agassizii
ENSATEG00000005627	-	90	49.714	ENSGGOG00000012041	SPEN	96	82.584	Gorilla_gorilla
ENSATEG00000005627	-	66	85.207	ENSHBUG00000023253	si:ch1073-335m2.2	95	85.207	Haplochromis_burtoni
ENSATEG00000005627	-	100	81.185	ENSHBUG00000020626	-	100	81.185	Haplochromis_burtoni
ENSATEG00000005627	-	73	57.117	ENSHGLG00000019259	SPEN	76	82.584	Heterocephalus_glaber_female
ENSATEG00000005627	-	70	56.484	ENSHGLG00100019294	SPEN	79	78.621	Heterocephalus_glaber_male
ENSATEG00000005627	-	95	61.780	ENSHCOG00000006004	si:ch1073-335m2.2	99	61.780	Hippocampus_comes
ENSATEG00000005627	-	94	66.816	ENSIPUG00000018212	si:ch1073-335m2.2	99	66.816	Ictalurus_punctatus
ENSATEG00000005627	-	100	53.696	ENSIPUG00000021668	spen	100	53.842	Ictalurus_punctatus
ENSATEG00000005627	-	90	48.145	ENSSTOG00000021428	SPEN	89	78.621	Ictidomys_tridecemlineatus
ENSATEG00000005627	-	90	50.205	ENSJJAG00000010882	Spen	98	83.146	Jaculus_jaculus
ENSATEG00000005627	-	100	78.067	ENSKMAG00000003882	-	100	78.095	Kryptolebias_marmoratus
ENSATEG00000005627	-	92	78.610	ENSKMAG00000021725	si:ch1073-335m2.2	99	80.233	Kryptolebias_marmoratus
ENSATEG00000005627	-	84	77.870	ENSLBEG00000019129	-	100	77.704	Labrus_bergylta
ENSATEG00000005627	-	51	83.432	ENSLBEG00000020855	si:ch1073-335m2.2	99	83.432	Labrus_bergylta
ENSATEG00000005627	-	72	85.185	ENSLACG00000003258	SPEN	77	85.185	Latimeria_chalumnae
ENSATEG00000005627	-	97	85.517	ENSLOCG00000007896	si:ch1073-335m2.2	97	85.517	Lepisosteus_oculatus
ENSATEG00000005627	-	99	45.266	ENSLAFG00000004524	SPEN	96	79.085	Loxodonta_africana
ENSATEG00000005627	-	90	49.776	ENSMFAG00000041974	SPEN	86	82.584	Macaca_fascicularis
ENSATEG00000005627	-	90	49.817	ENSMMUG00000008026	SPEN	86	82.584	Macaca_mulatta
ENSATEG00000005627	-	90	49.020	ENSMLEG00000039293	SPEN	86	71.348	Mandrillus_leucophaeus
ENSATEG00000005627	-	97	75.000	ENSMAMG00000023870	si:ch1073-335m2.2	99	75.000	Mastacembelus_armatus
ENSATEG00000005627	-	73	85.207	ENSMZEG00005011762	si:ch1073-335m2.2	99	85.207	Maylandia_zebra
ENSATEG00000005627	-	90	78.363	ENSMZEG00005021491	-	99	79.302	Maylandia_zebra
ENSATEG00000005627	-	92	48.346	ENSMAUG00000008318	Spen	92	82.584	Mesocricetus_auratus
ENSATEG00000005627	-	99	46.170	ENSMICG00000030994	SPEN	87	82.022	Microcebus_murinus
ENSATEG00000005627	-	89	48.450	ENSMOCG00000016083	Spen	97	82.584	Microtus_ochrogaster
ENSATEG00000005627	-	93	76.042	ENSMMOG00000021742	si:ch1073-335m2.2	71	80.814	Mola_mola
ENSATEG00000005627	-	100	46.314	ENSMODG00000003411	SPEN	100	45.947	Monodelphis_domestica
ENSATEG00000005627	-	100	86.313	ENSMALG00000008625	-	100	86.369	Monopterus_albus
ENSATEG00000005627	-	81	52.085	MGP_CAROLIEiJ_G0026745	Spen	89	82.022	Mus_caroli
ENSATEG00000005627	-	90	48.625	ENSMUSG00000040761	Spen	89	82.584	Mus_musculus
ENSATEG00000005627	-	99	45.548	MGP_PahariEiJ_G0029076	Spen	89	82.022	Mus_pahari
ENSATEG00000005627	-	89	49.248	MGP_SPRETEiJ_G0027724	Spen	97	82.022	Mus_spretus
ENSATEG00000005627	-	62	55.598	ENSMPUG00000016317	SPEN	96	74.545	Mustela_putorius_furo
ENSATEG00000005627	-	93	88.172	ENSMLUG00000010144	SPEN	98	79.508	Myotis_lucifugus
ENSATEG00000005627	-	90	65.306	ENSNGAG00000000641	Spen	96	82.584	Nannospalax_galili
ENSATEG00000005627	-	85	78.782	ENSNBRG00000022090	-	100	78.782	Neolamprologus_brichardi
ENSATEG00000005627	-	89	49.171	ENSNLEG00000007652	SPEN	86	79.085	Nomascus_leucogenys
ENSATEG00000005627	-	90	84.375	ENSMEUG00000002422	SPEN	90	84.375	Notamacropus_eugenii
ENSATEG00000005627	-	84	66.537	ENSOPRG00000015800	SPEN	81	80.000	Ochotona_princeps
ENSATEG00000005627	-	95	46.992	ENSODEG00000016644	SPEN	95	82.584	Octodon_degus
ENSATEG00000005627	-	100	79.092	ENSONIG00000006573	-	99	88.087	Oreochromis_niloticus
ENSATEG00000005627	-	69	53.420	ENSOCUG00000010840	SPEN	97	62.941	Oryctolagus_cuniculus
ENSATEG00000005627	-	87	65.717	ENSORLG00000028894	-	100	65.558	Oryzias_latipes
ENSATEG00000005627	-	87	66.367	ENSORLG00020007735	-	100	66.238	Oryzias_latipes_hni
ENSATEG00000005627	-	100	68.221	ENSORLG00015022085	-	100	68.110	Oryzias_latipes_hsok
ENSATEG00000005627	-	95	83.951	ENSORLG00015005537	si:ch1073-335m2.2	99	79.651	Oryzias_latipes_hsok
ENSATEG00000005627	-	100	67.883	ENSOMEG00000007639	-	100	67.659	Oryzias_melastigma
ENSATEG00000005627	-	99	59.058	ENSOMEG00000004509	si:ch1073-335m2.2	100	59.058	Oryzias_melastigma
ENSATEG00000005627	-	99	46.183	ENSOGAG00000025110	SPEN	96	82.584	Otolemur_garnettii
ENSATEG00000005627	-	99	45.246	ENSOARG00000008477	SPEN	96	74.269	Ovis_aries
ENSATEG00000005627	-	89	49.007	ENSPPAG00000035690	SPEN	86	79.333	Pan_paniscus
ENSATEG00000005627	-	90	49.469	ENSPTRG00000000210	SPEN	96	82.584	Pan_troglodytes
ENSATEG00000005627	-	89	49.398	ENSPANG00000006293	SPEN	85	82.584	Papio_anubis
ENSATEG00000005627	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSATEG00000005627	-	100	54.309	ENSPKIG00000002617	SPEN	100	54.267	Paramormyrops_kingsleyae
ENSATEG00000005627	-	99	46.993	ENSPSIG00000008026	SPEN	99	79.470	Pelodiscus_sinensis
ENSATEG00000005627	-	88	48.316	ENSPEMG00000022997	Spen	97	77.931	Peromyscus_maniculatus_bairdii
ENSATEG00000005627	-	98	75.862	ENSPFOG00000017986	si:ch1073-335m2.2	99	80.233	Poecilia_formosa
ENSATEG00000005627	-	98	75.862	ENSPLAG00000016625	si:ch1073-335m2.2	99	80.233	Poecilia_latipinna
ENSATEG00000005627	-	98	75.862	ENSPMEG00000002674	si:ch1073-335m2.2	99	80.233	Poecilia_mexicana
ENSATEG00000005627	-	100	76.644	ENSPMEG00000006764	-	100	76.925	Poecilia_mexicana
ENSATEG00000005627	-	98	77.720	ENSPREG00000005357	si:ch1073-335m2.2	99	80.233	Poecilia_reticulata
ENSATEG00000005627	-	100	76.363	ENSPREG00000010399	-	100	76.644	Poecilia_reticulata
ENSATEG00000005627	-	94	48.672	ENSPPYG00000001834	SPEN	96	82.584	Pongo_abelii
ENSATEG00000005627	-	87	70.259	ENSPCAG00000009543	SPEN	78	73.469	Procavia_capensis
ENSATEG00000005627	-	99	45.052	ENSPCOG00000021735	SPEN	87	82.022	Propithecus_coquereli
ENSATEG00000005627	-	75	65.481	ENSPVAG00000013794	SPEN	72	82.022	Pteropus_vampyrus
ENSATEG00000005627	-	100	81.241	ENSPNYG00000012379	-	100	81.241	Pundamilia_nyererei
ENSATEG00000005627	-	73	85.207	ENSPNYG00000009042	si:ch1073-335m2.2	99	85.207	Pundamilia_nyererei
ENSATEG00000005627	-	100	56.949	ENSPNAG00000020795	spen	100	57.052	Pygocentrus_nattereri
ENSATEG00000005627	-	97	76.020	ENSPNAG00000011452	si:ch1073-335m2.2	99	76.020	Pygocentrus_nattereri
ENSATEG00000005627	-	68	56.371	ENSRNOG00000033556	Spen	97	79.470	Rattus_norvegicus
ENSATEG00000005627	-	90	48.959	ENSRBIG00000039654	SPEN	86	79.333	Rhinopithecus_bieti
ENSATEG00000005627	-	89	49.114	ENSRROG00000035686	SPEN	86	79.085	Rhinopithecus_roxellana
ENSATEG00000005627	-	88	48.939	ENSSBOG00000028770	SPEN	85	79.085	Saimiri_boliviensis_boliviensis
ENSATEG00000005627	-	68	47.971	ENSSHAG00000004960	SPEN	98	80.441	Sarcophilus_harrisii
ENSATEG00000005627	-	100	55.850	ENSSFOG00015010267	si:ch1073-335m2.2	100	55.598	Scleropages_formosus
ENSATEG00000005627	-	88	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	55.933	Scleropages_formosus
ENSATEG00000005627	-	100	83.867	ENSSMAG00000008996	-	100	83.783	Scophthalmus_maximus
ENSATEG00000005627	-	52	71.300	ENSSMAG00000000125	si:ch1073-335m2.2	100	71.300	Scophthalmus_maximus
ENSATEG00000005627	-	100	87.468	ENSSDUG00000003476	-	100	87.328	Seriola_dumerili
ENSATEG00000005627	-	97	76.733	ENSSDUG00000008416	si:ch1073-335m2.2	99	76.733	Seriola_dumerili
ENSATEG00000005627	-	97	75.862	ENSSLDG00000023347	si:ch1073-335m2.2	78	46.065	Seriola_lalandi_dorsalis
ENSATEG00000005627	-	100	87.230	ENSSLDG00000012950	-	100	87.174	Seriola_lalandi_dorsalis
ENSATEG00000005627	-	87	44.421	ENSSPUG00000001866	-	100	44.358	Sphenodon_punctatus
ENSATEG00000005627	-	98	80.214	ENSSPAG00000012454	si:ch1073-335m2.2	100	80.214	Stegastes_partitus
ENSATEG00000005627	-	100	85.494	ENSSPAG00000006014	-	100	85.354	Stegastes_partitus
ENSATEG00000005627	-	85	45.190	ENSSSCG00000034484	SPEN	84	82.584	Sus_scrofa
ENSATEG00000005627	-	100	76.279	ENSTRUG00000024350	-	100	76.054	Takifugu_rubripes
ENSATEG00000005627	-	97	86.682	ENSTNIG00000010907	-	100	85.779	Tetraodon_nigroviridis
ENSATEG00000005627	-	98	67.241	ENSTNIG00000014666	si:ch1073-335m2.2	72	73.632	Tetraodon_nigroviridis
ENSATEG00000005627	-	71	79.195	ENSTBEG00000003628	SPEN	69	79.195	Tupaia_belangeri
ENSATEG00000005627	-	77	75.472	ENSTTRG00000015704	SPEN	73	79.333	Tursiops_truncatus
ENSATEG00000005627	-	82	82.418	ENSUAMG00000009600	SPEN	96	82.584	Ursus_americanus
ENSATEG00000005627	-	81	82.418	ENSUMAG00000021641	SPEN	96	77.070	Ursus_maritimus
ENSATEG00000005627	-	73	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSATEG00000005627	-	98	77.720	ENSXCOG00000004516	si:ch1073-335m2.2	99	77.720	Xiphophorus_couchianus
ENSATEG00000005627	-	97	79.144	ENSXMAG00000029887	si:ch1073-335m2.2	99	80.814	Xiphophorus_maculatus
ENSATEG00000005627	-	100	76.229	ENSXMAG00000021384	-	88	96.133	Xiphophorus_maculatus