EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000005705 (Gene tree)
Gene ID: 113156521
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 7084 bases
Position: chrOOHO01000022.1:14592404-14599487
Accession: 113156521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000008151	AD	PF09793.9	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000008283	-	2035	-	ENSATEP00000008151	196 (aa)	XP_026207515	UPI000E45915B

Gene Model

Click here to download ENSATEG00000005705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000005705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000005705	lsm12b	100	85.204	ENSG00000161654	LSM12	100	85.204	Homo_sapiens
ENSATEG00000005705	lsm12b	100	97.959	ENSAPOG00000007907	lsm12b	100	97.959	Acanthochromis_polyacanthus
ENSATEG00000005705	lsm12b	100	83.417	ENSAMEG00000018321	LSM12	100	83.417	Ailuropoda_melanoleuca
ENSATEG00000005705	lsm12b	100	96.429	ENSACIG00000008538	lsm12b	100	96.429	Amphilophus_citrinellus
ENSATEG00000005705	lsm12b	100	98.469	ENSAOCG00000021847	lsm12b	88	98.469	Amphiprion_ocellaris
ENSATEG00000005705	lsm12b	100	98.469	ENSAPEG00000002252	lsm12b	100	98.469	Amphiprion_percula
ENSATEG00000005705	lsm12b	100	84.184	ENSACAG00000004618	LSM12	100	84.184	Anolis_carolinensis
ENSATEG00000005705	lsm12b	100	85.204	ENSANAG00000029011	LSM12	100	85.204	Aotus_nancymaae
ENSATEG00000005705	lsm12b	100	96.939	ENSACLG00000026332	lsm12b	100	96.939	Astatotilapia_calliptera
ENSATEG00000005705	lsm12b	100	84.694	ENSAMXG00000036117	lsm12a	91	84.694	Astyanax_mexicanus
ENSATEG00000005705	lsm12b	100	92.857	ENSAMXG00000032952	lsm12b	100	92.857	Astyanax_mexicanus
ENSATEG00000005705	lsm12b	100	85.204	ENSBTAG00000016252	LSM12	100	85.204	Bos_taurus
ENSATEG00000005705	lsm12b	100	85.204	ENSCJAG00000048480	LSM12	100	85.204	Callithrix_jacchus
ENSATEG00000005705	lsm12b	100	85.204	ENSCAFG00000014379	LSM12	92	85.204	Canis_familiaris
ENSATEG00000005705	lsm12b	100	85.204	ENSCAFG00020012173	LSM12	100	85.204	Canis_lupus_dingo
ENSATEG00000005705	lsm12b	100	85.204	ENSCHIG00000018175	LSM12	100	85.204	Capra_hircus
ENSATEG00000005705	lsm12b	100	85.204	ENSTSYG00000036361	LSM12	100	85.204	Carlito_syrichta
ENSATEG00000005705	lsm12b	83	81.481	ENSCAPG00000009647	LSM12	89	81.481	Cavia_aperea
ENSATEG00000005705	lsm12b	100	84.694	ENSCPOG00000012860	LSM12	100	84.694	Cavia_porcellus
ENSATEG00000005705	lsm12b	100	85.204	ENSCCAG00000032905	LSM12	100	85.204	Cebus_capucinus
ENSATEG00000005705	lsm12b	100	85.204	ENSCATG00000030577	-	100	85.204	Cercocebus_atys
ENSATEG00000005705	lsm12b	100	85.204	ENSCLAG00000015759	LSM12	100	85.204	Chinchilla_lanigera
ENSATEG00000005705	lsm12b	100	85.714	ENSCSAG00000003486	LSM12	100	85.714	Chlorocebus_sabaeus
ENSATEG00000005705	lsm12b	56	85.321	ENSCHOG00000001198	LSM12	100	85.321	Choloepus_hoffmanni
ENSATEG00000005705	lsm12b	100	84.694	ENSCPBG00000027105	LSM12	100	84.694	Chrysemys_picta_bellii
ENSATEG00000005705	lsm12b	100	85.204	ENSCANG00000043328	LSM12	100	85.204	Colobus_angolensis_palliatus
ENSATEG00000005705	lsm12b	100	85.204	ENSCGRG00001002094	Lsm12	100	85.204	Cricetulus_griseus_chok1gshd
ENSATEG00000005705	lsm12b	89	77.011	ENSCGRG00000004316	Lsm12	98	77.011	Cricetulus_griseus_crigri
ENSATEG00000005705	lsm12b	100	97.959	ENSCSEG00000008434	lsm12b	100	97.959	Cynoglossus_semilaevis
ENSATEG00000005705	lsm12b	100	96.429	ENSCVAG00000008755	lsm12b	100	96.429	Cyprinodon_variegatus
ENSATEG00000005705	lsm12b	100	93.878	ENSDARG00000109510	lsm12b	100	93.878	Danio_rerio
ENSATEG00000005705	lsm12b	100	85.714	ENSDARG00000028848	lsm12a	100	85.714	Danio_rerio
ENSATEG00000005705	lsm12b	100	85.204	ENSDNOG00000002418	LSM12	91	85.204	Dasypus_novemcinctus
ENSATEG00000005705	lsm12b	100	85.204	ENSDORG00000016381	Lsm12	100	85.204	Dipodomys_ordii
ENSATEG00000005705	lsm12b	73	32.911	FBgn0036057	CG14164	83	32.911	Drosophila_melanogaster
ENSATEG00000005705	lsm12b	83	33.735	FBgn0030364	Lsm12	76	33.735	Drosophila_melanogaster
ENSATEG00000005705	lsm12b	88	75.723	ENSETEG00000011012	-	99	75.723	Echinops_telfairi
ENSATEG00000005705	lsm12b	100	84.694	ENSETEG00000008374	LSM12	100	84.694	Echinops_telfairi
ENSATEG00000005705	lsm12b	85	67.665	ENSEBUG00000016299	lsm12a	92	67.665	Eptatretus_burgeri
ENSATEG00000005705	lsm12b	100	85.204	ENSEASG00005010155	LSM12	100	85.204	Equus_asinus_asinus
ENSATEG00000005705	lsm12b	100	85.204	ENSECAG00000009071	LSM12	100	85.204	Equus_caballus
ENSATEG00000005705	lsm12b	78	84.967	ENSEEUG00000002419	-	100	84.967	Erinaceus_europaeus
ENSATEG00000005705	lsm12b	100	91.327	ENSELUG00000000256	-	100	91.327	Esox_lucius
ENSATEG00000005705	lsm12b	100	94.388	ENSELUG00000015538	lsm12b	100	89.796	Esox_lucius
ENSATEG00000005705	lsm12b	100	85.204	ENSFCAG00000037021	LSM12	100	85.204	Felis_catus
ENSATEG00000005705	lsm12b	80	81.410	ENSFDAG00000008954	LSM12	91	81.410	Fukomys_damarensis
ENSATEG00000005705	lsm12b	100	96.429	ENSFHEG00000019913	lsm12b	100	96.429	Fundulus_heteroclitus
ENSATEG00000005705	lsm12b	81	96.835	ENSGMOG00000015449	lsm12b	100	96.835	Gadus_morhua
ENSATEG00000005705	lsm12b	78	85.621	ENSGALG00000039803	LSM12	100	85.621	Gallus_gallus
ENSATEG00000005705	lsm12b	100	96.429	ENSGAFG00000011829	lsm12b	100	96.429	Gambusia_affinis
ENSATEG00000005705	lsm12b	81	97.468	ENSGACG00000003428	lsm12b	100	97.468	Gasterosteus_aculeatus
ENSATEG00000005705	lsm12b	100	83.673	ENSGAGG00000021965	LSM12	100	83.673	Gopherus_agassizii
ENSATEG00000005705	lsm12b	100	85.204	ENSGGOG00000010589	-	100	85.204	Gorilla_gorilla
ENSATEG00000005705	lsm12b	85	97.006	ENSHBUG00000007667	lsm12b	74	97.006	Haplochromis_burtoni
ENSATEG00000005705	lsm12b	100	85.204	ENSHGLG00000011411	LSM12	100	85.204	Heterocephalus_glaber_female
ENSATEG00000005705	lsm12b	79	84.416	ENSHGLG00100000241	LSM12	82	84.416	Heterocephalus_glaber_male
ENSATEG00000005705	lsm12b	100	94.388	ENSHCOG00000002094	lsm12b	100	94.388	Hippocampus_comes
ENSATEG00000005705	lsm12b	100	93.367	ENSIPUG00000014800	lsm12	100	93.367	Ictalurus_punctatus
ENSATEG00000005705	lsm12b	99	84.021	ENSIPUG00000008936	lsm12a	99	84.021	Ictalurus_punctatus
ENSATEG00000005705	lsm12b	100	85.204	ENSSTOG00000007403	LSM12	100	85.204	Ictidomys_tridecemlineatus
ENSATEG00000005705	lsm12b	100	84.184	ENSJJAG00000004364	-	100	84.545	Jaculus_jaculus
ENSATEG00000005705	lsm12b	96	75.789	ENSJJAG00000011793	-	100	75.789	Jaculus_jaculus
ENSATEG00000005705	lsm12b	80	73.585	ENSJJAG00000014652	-	95	73.585	Jaculus_jaculus
ENSATEG00000005705	lsm12b	85	96.407	ENSKMAG00000007704	lsm12b	56	96.407	Kryptolebias_marmoratus
ENSATEG00000005705	lsm12b	100	97.959	ENSLBEG00000027999	lsm12b	100	97.959	Labrus_bergylta
ENSATEG00000005705	lsm12b	100	88.776	ENSLACG00000015981	LSM12	100	88.776	Latimeria_chalumnae
ENSATEG00000005705	lsm12b	100	91.327	ENSLOCG00000013079	lsm12b	99	91.327	Lepisosteus_oculatus
ENSATEG00000005705	lsm12b	100	85.204	ENSLAFG00000005202	LSM12	100	85.204	Loxodonta_africana
ENSATEG00000005705	lsm12b	100	85.204	ENSMFAG00000031376	LSM12	100	85.204	Macaca_fascicularis
ENSATEG00000005705	lsm12b	100	85.204	ENSMMUG00000006804	LSM12	100	85.204	Macaca_mulatta
ENSATEG00000005705	lsm12b	65	73.563	ENSMMUG00000042106	-	100	73.563	Macaca_mulatta
ENSATEG00000005705	lsm12b	100	85.204	ENSMNEG00000030594	-	100	85.204	Macaca_nemestrina
ENSATEG00000005705	lsm12b	100	85.204	ENSMLEG00000039934	LSM12	100	85.204	Mandrillus_leucophaeus
ENSATEG00000005705	lsm12b	100	97.959	ENSMAMG00000004279	lsm12b	100	97.959	Mastacembelus_armatus
ENSATEG00000005705	lsm12b	100	96.939	ENSMZEG00005005754	lsm12b	100	96.939	Maylandia_zebra
ENSATEG00000005705	lsm12b	100	85.714	ENSMICG00000037219	LSM12	100	85.714	Microcebus_murinus
ENSATEG00000005705	lsm12b	100	71.939	ENSMOCG00000017015	-	86	71.939	Microtus_ochrogaster
ENSATEG00000005705	lsm12b	100	85.204	ENSMOCG00000019878	-	100	85.204	Microtus_ochrogaster
ENSATEG00000005705	lsm12b	100	97.959	ENSMMOG00000020848	lsm12b	100	97.959	Mola_mola
ENSATEG00000005705	lsm12b	100	97.959	ENSMALG00000007578	lsm12b	100	97.959	Monopterus_albus
ENSATEG00000005705	lsm12b	100	84.694	MGP_CAROLIEiJ_G0017241	Lsm12	100	84.694	Mus_caroli
ENSATEG00000005705	lsm12b	100	85.204	ENSMUSG00000020922	Lsm12	100	85.204	Mus_musculus
ENSATEG00000005705	lsm12b	100	78.404	MGP_PahariEiJ_G0018371	Lsm12	100	78.404	Mus_pahari
ENSATEG00000005705	lsm12b	100	84.694	MGP_SPRETEiJ_G0018084	Lsm12	99	86.111	Mus_spretus
ENSATEG00000005705	lsm12b	100	85.714	ENSMLUG00000006391	LSM12	100	85.714	Myotis_lucifugus
ENSATEG00000005705	lsm12b	100	85.204	ENSNGAG00000001870	Lsm12	100	85.204	Nannospalax_galili
ENSATEG00000005705	lsm12b	100	59.113	ENSNGAG00000015429	-	100	59.113	Nannospalax_galili
ENSATEG00000005705	lsm12b	100	96.939	ENSNBRG00000006266	lsm12b	100	96.939	Neolamprologus_brichardi
ENSATEG00000005705	lsm12b	100	85.204	ENSNLEG00000005580	-	100	85.204	Nomascus_leucogenys
ENSATEG00000005705	lsm12b	85	85.542	ENSMEUG00000007501	-	100	85.542	Notamacropus_eugenii
ENSATEG00000005705	lsm12b	100	85.204	ENSOPRG00000008552	LSM12	100	85.204	Ochotona_princeps
ENSATEG00000005705	lsm12b	99	85.052	ENSODEG00000017998	-	99	85.052	Octodon_degus
ENSATEG00000005705	lsm12b	100	77.551	ENSODEG00000007886	-	74	77.551	Octodon_degus
ENSATEG00000005705	lsm12b	100	96.939	ENSONIG00000007933	lsm12b	100	96.939	Oreochromis_niloticus
ENSATEG00000005705	lsm12b	99	80.000	ENSOCUG00000021254	-	100	80.000	Oryctolagus_cuniculus
ENSATEG00000005705	lsm12b	99	79.487	ENSOCUG00000027889	-	100	79.487	Oryctolagus_cuniculus
ENSATEG00000005705	lsm12b	99	78.974	ENSOCUG00000024823	-	100	78.974	Oryctolagus_cuniculus
ENSATEG00000005705	lsm12b	100	83.417	ENSOCUG00000008566	-	100	83.417	Oryctolagus_cuniculus
ENSATEG00000005705	lsm12b	100	97.449	ENSORLG00000011310	lsm12b	100	97.449	Oryzias_latipes
ENSATEG00000005705	lsm12b	100	97.449	ENSORLG00020002060	lsm12b	92	97.449	Oryzias_latipes_hni
ENSATEG00000005705	lsm12b	100	97.449	ENSORLG00015001647	lsm12b	92	97.449	Oryzias_latipes_hsok
ENSATEG00000005705	lsm12b	100	98.469	ENSOMEG00000006184	lsm12b	92	98.469	Oryzias_melastigma
ENSATEG00000005705	lsm12b	100	85.714	ENSOGAG00000010489	LSM12	100	85.714	Otolemur_garnettii
ENSATEG00000005705	lsm12b	100	82.178	ENSOARG00000006589	LSM12	100	82.178	Ovis_aries
ENSATEG00000005705	lsm12b	100	75.510	ENSPPAG00000034974	-	100	75.510	Pan_paniscus
ENSATEG00000005705	lsm12b	100	85.204	ENSPPRG00000023420	LSM12	100	85.204	Panthera_pardus
ENSATEG00000005705	lsm12b	72	83.636	ENSPTIG00000014850	-	100	83.636	Panthera_tigris_altaica
ENSATEG00000005705	lsm12b	78	84.967	ENSPTIG00000012704	-	82	84.967	Panthera_tigris_altaica
ENSATEG00000005705	lsm12b	100	85.204	ENSPTRG00000009261	LSM12	100	85.204	Pan_troglodytes
ENSATEG00000005705	lsm12b	100	85.204	ENSPANG00000021315	-	100	85.204	Papio_anubis
ENSATEG00000005705	lsm12b	100	83.673	ENSPKIG00000017932	-	100	83.673	Paramormyrops_kingsleyae
ENSATEG00000005705	lsm12b	100	92.347	ENSPKIG00000021058	lsm12b	100	92.347	Paramormyrops_kingsleyae
ENSATEG00000005705	lsm12b	100	97.959	ENSPMGG00000021344	lsm12b	100	97.959	Periophthalmus_magnuspinnatus
ENSATEG00000005705	lsm12b	100	85.204	ENSPEMG00000012199	Lsm12	100	85.204	Peromyscus_maniculatus_bairdii
ENSATEG00000005705	lsm12b	89	66.286	ENSPMAG00000005461	lsm12a	99	66.286	Petromyzon_marinus
ENSATEG00000005705	lsm12b	100	85.204	ENSPCIG00000020244	LSM12	100	85.204	Phascolarctos_cinereus
ENSATEG00000005705	lsm12b	100	95.408	ENSPFOG00000015930	lsm12b	100	95.408	Poecilia_formosa
ENSATEG00000005705	lsm12b	100	95.408	ENSPLAG00000021089	lsm12b	100	95.408	Poecilia_latipinna
ENSATEG00000005705	lsm12b	100	95.408	ENSPMEG00000012961	lsm12b	100	95.408	Poecilia_mexicana
ENSATEG00000005705	lsm12b	87	96.491	ENSPREG00000010236	lsm12b	95	96.491	Poecilia_reticulata
ENSATEG00000005705	lsm12b	100	85.204	ENSPPYG00000008344	LSM12	100	85.204	Pongo_abelii
ENSATEG00000005705	lsm12b	81	86.164	ENSPCAG00000008790	LSM12	100	86.164	Procavia_capensis
ENSATEG00000005705	lsm12b	100	85.204	ENSPCOG00000027951	LSM12	100	85.204	Propithecus_coquereli
ENSATEG00000005705	lsm12b	100	85.714	ENSPVAG00000013706	LSM12	100	85.714	Pteropus_vampyrus
ENSATEG00000005705	lsm12b	100	96.939	ENSPNYG00000003386	lsm12b	100	96.939	Pundamilia_nyererei
ENSATEG00000005705	lsm12b	100	85.714	ENSPNAG00000018435	lsm12a	100	85.714	Pygocentrus_nattereri
ENSATEG00000005705	lsm12b	100	93.367	ENSPNAG00000004186	lsm12b	100	93.367	Pygocentrus_nattereri
ENSATEG00000005705	lsm12b	100	85.204	ENSRNOG00000020894	Lsm12	100	85.204	Rattus_norvegicus
ENSATEG00000005705	lsm12b	100	85.204	ENSRBIG00000027910	LSM12	100	85.204	Rhinopithecus_bieti
ENSATEG00000005705	lsm12b	100	85.204	ENSRROG00000045530	-	100	85.204	Rhinopithecus_roxellana
ENSATEG00000005705	lsm12b	99	53.093	ENSRROG00000000537	-	99	53.093	Rhinopithecus_roxellana
ENSATEG00000005705	lsm12b	100	85.204	ENSSBOG00000025310	LSM12	100	85.204	Saimiri_boliviensis_boliviensis
ENSATEG00000005705	lsm12b	81	83.544	ENSSHAG00000014914	LSM12	100	83.544	Sarcophilus_harrisii
ENSATEG00000005705	lsm12b	100	93.367	ENSSFOG00015020392	lsm12a	100	93.367	Scleropages_formosus
ENSATEG00000005705	lsm12b	100	93.878	ENSSFOG00015009612	lsm12	100	93.878	Scleropages_formosus
ENSATEG00000005705	lsm12b	100	97.959	ENSSMAG00000008089	lsm12b	100	97.959	Scophthalmus_maximus
ENSATEG00000005705	lsm12b	100	97.959	ENSSDUG00000012711	lsm12b	100	97.959	Seriola_dumerili
ENSATEG00000005705	lsm12b	100	97.959	ENSSLDG00000007404	lsm12b	100	97.959	Seriola_lalandi_dorsalis
ENSATEG00000005705	lsm12b	78	84.314	ENSSARG00000005537	LSM12	100	84.314	Sorex_araneus
ENSATEG00000005705	lsm12b	100	85.714	ENSSPUG00000011984	LSM12	100	85.714	Sphenodon_punctatus
ENSATEG00000005705	lsm12b	100	98.469	ENSSPAG00000017058	lsm12b	100	98.469	Stegastes_partitus
ENSATEG00000005705	lsm12b	100	85.204	ENSSSCG00000032394	LSM12	100	85.204	Sus_scrofa
ENSATEG00000005705	lsm12b	100	97.449	ENSTRUG00000007121	lsm12b	100	97.449	Takifugu_rubripes
ENSATEG00000005705	lsm12b	100	96.429	ENSTNIG00000014436	lsm12b	100	96.429	Tetraodon_nigroviridis
ENSATEG00000005705	lsm12b	100	82.653	ENSTBEG00000012392	-	100	82.653	Tupaia_belangeri
ENSATEG00000005705	lsm12b	100	84.694	ENSTBEG00000012523	-	100	84.694	Tupaia_belangeri
ENSATEG00000005705	lsm12b	100	85.204	ENSTTRG00000010433	LSM12	100	85.204	Tursiops_truncatus
ENSATEG00000005705	lsm12b	100	85.204	ENSUAMG00000006313	LSM12	100	85.204	Ursus_americanus
ENSATEG00000005705	lsm12b	81	82.278	ENSUMAG00000012987	LSM12	90	82.278	Ursus_maritimus
ENSATEG00000005705	lsm12b	100	80.612	ENSVPAG00000011145	LSM12	100	80.612	Vicugna_pacos
ENSATEG00000005705	lsm12b	100	85.204	ENSVVUG00000017581	LSM12	100	85.204	Vulpes_vulpes
ENSATEG00000005705	lsm12b	82	61.250	ENSXETG00000003371	lsm12	77	61.250	Xenopus_tropicalis
ENSATEG00000005705	lsm12b	100	96.429	ENSXCOG00000003994	lsm12b	100	96.429	Xiphophorus_couchianus
ENSATEG00000005705	lsm12b	100	96.429	ENSXMAG00000020950	lsm12b	100	96.429	Xiphophorus_maculatus