EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000005843 (Gene tree)
Gene ID: 113173682
Gene Symbol: upf3a
Alias: -
Full Name: regulator of nonsense transcripts 3A-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 3407 bases
Position: chrOOHO01000008.1:7764891-7768297
Accession: 113173682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000008364	Smg4_UPF3	PF03467.15	9.8e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000008513	-	1392	XM_026377187	ENSATEP00000008364	463 (aa)	XP_026232972	UPI000E45AF5E

Gene Model

Click here to download ENSATEG00000005843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000005843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000005843	upf3a	88	57.968	ENSG00000169062	UPF3A	91	58.199	Homo_sapiens
ENSATEG00000005843	upf3a	100	94.600	ENSAPOG00000013484	upf3a	100	94.600	Acanthochromis_polyacanthus
ENSATEG00000005843	upf3a	88	57.604	ENSAMEG00000004259	UPF3A	95	57.604	Ailuropoda_melanoleuca
ENSATEG00000005843	upf3a	98	90.336	ENSACIG00000020468	upf3a	99	90.336	Amphilophus_citrinellus
ENSATEG00000005843	upf3a	100	95.464	ENSAOCG00000020784	upf3a	100	95.464	Amphiprion_ocellaris
ENSATEG00000005843	upf3a	52	68.400	ENSAOCG00000000706	upf3b	93	48.268	Amphiprion_ocellaris
ENSATEG00000005843	upf3a	100	95.464	ENSAPEG00000003519	upf3a	100	95.464	Amphiprion_percula
ENSATEG00000005843	upf3a	82	67.342	ENSACAG00000001540	UPF3A	98	65.534	Anolis_carolinensis
ENSATEG00000005843	upf3a	94	53.445	ENSANAG00000021713	UPF3A	99	53.390	Aotus_nancymaae
ENSATEG00000005843	upf3a	83	46.192	ENSANAG00000025598	-	75	60.976	Aotus_nancymaae
ENSATEG00000005843	upf3a	82	45.432	ENSANAG00000021894	-	83	66.292	Aotus_nancymaae
ENSATEG00000005843	upf3a	100	90.852	ENSACLG00000026274	upf3a	100	90.852	Astatotilapia_calliptera
ENSATEG00000005843	upf3a	99	82.251	ENSAMXG00000002608	upf3a	99	82.857	Astyanax_mexicanus
ENSATEG00000005843	upf3a	90	56.081	ENSCJAG00000019102	UPF3A	97	54.957	Callithrix_jacchus
ENSATEG00000005843	upf3a	82	45.098	ENSCJAG00000004975	UPF3B	83	66.292	Callithrix_jacchus
ENSATEG00000005843	upf3a	91	55.022	ENSCAFG00000006504	UPF3A	98	54.957	Canis_familiaris
ENSATEG00000005843	upf3a	91	55.022	ENSCAFG00020014268	UPF3A	96	54.428	Canis_lupus_dingo
ENSATEG00000005843	upf3a	84	46.117	ENSCAFG00020004074	UPF3B	72	66.279	Canis_lupus_dingo
ENSATEG00000005843	upf3a	88	54.503	ENSCHIG00000008682	UPF3A	85	54.503	Capra_hircus
ENSATEG00000005843	upf3a	82	45.833	ENSTSYG00000014690	UPF3B	82	62.842	Carlito_syrichta
ENSATEG00000005843	upf3a	76	56.201	ENSTSYG00000001918	UPF3A	99	56.201	Carlito_syrichta
ENSATEG00000005843	upf3a	76	58.108	ENSCPOG00000006824	UPF3A	86	57.951	Cavia_porcellus
ENSATEG00000005843	upf3a	92	55.172	ENSCCAG00000018406	UPF3A	97	55.388	Cebus_capucinus
ENSATEG00000005843	upf3a	81	38.701	ENSCCAG00000029813	-	57	56.725	Cebus_capucinus
ENSATEG00000005843	upf3a	92	57.788	ENSCATG00000029733	UPF3A	94	58.014	Cercocebus_atys
ENSATEG00000005843	upf3a	94	56.421	ENSCSAG00000017388	UPF3A	98	56.632	Chlorocebus_sabaeus
ENSATEG00000005843	upf3a	81	60.000	ENSCGRG00001017387	Upf3a	89	58.421	Cricetulus_griseus_chok1gshd
ENSATEG00000005843	upf3a	81	60.000	ENSCGRG00000001468	Upf3a	89	58.421	Cricetulus_griseus_crigri
ENSATEG00000005843	upf3a	99	89.827	ENSCSEG00000005106	upf3a	99	89.827	Cynoglossus_semilaevis
ENSATEG00000005843	upf3a	100	87.716	ENSCVAG00000022333	upf3a	100	87.716	Cyprinodon_variegatus
ENSATEG00000005843	upf3a	99	80.562	ENSDARG00000069297	upf3a	100	80.562	Danio_rerio
ENSATEG00000005843	upf3a	84	60.584	ENSDNOG00000034391	UPF3A	93	60.584	Dasypus_novemcinctus
ENSATEG00000005843	upf3a	92	52.586	ENSETEG00000010110	UPF3A	96	52.155	Echinops_telfairi
ENSATEG00000005843	upf3a	82	48.379	ENSEASG00005012919	UPF3B	68	63.415	Equus_asinus_asinus
ENSATEG00000005843	upf3a	90	56.696	ENSEASG00005021884	UPF3A	93	56.696	Equus_asinus_asinus
ENSATEG00000005843	upf3a	88	59.016	ENSECAG00000017141	UPF3A	93	57.494	Equus_caballus
ENSATEG00000005843	upf3a	82	48.379	ENSECAG00000016947	UPF3B	68	57.831	Equus_caballus
ENSATEG00000005843	upf3a	98	83.983	ENSELUG00000011050	upf3a	99	83.983	Esox_lucius
ENSATEG00000005843	upf3a	90	59.009	ENSFCAG00000014602	UPF3A	92	59.009	Felis_catus
ENSATEG00000005843	upf3a	51	67.755	ENSFHEG00000017895	upf3b	89	49.880	Fundulus_heteroclitus
ENSATEG00000005843	upf3a	69	80.368	ENSGMOG00000019615	upf3a	100	80.368	Gadus_morhua
ENSATEG00000005843	upf3a	100	88.793	ENSGAFG00000021170	upf3a	100	88.793	Gambusia_affinis
ENSATEG00000005843	upf3a	79	50.495	ENSGACG00000017435	upf3b	60	70.122	Gasterosteus_aculeatus
ENSATEG00000005843	upf3a	69	82.812	ENSGACG00000001972	upf3a	100	82.812	Gasterosteus_aculeatus
ENSATEG00000005843	upf3a	81	48.837	ENSGGOG00000043074	-	81	50.260	Gorilla_gorilla
ENSATEG00000005843	upf3a	90	56.512	ENSGGOG00000015428	UPF3A	95	56.512	Gorilla_gorilla
ENSATEG00000005843	upf3a	80	49.468	ENSGGOG00000041219	-	85	50.909	Gorilla_gorilla
ENSATEG00000005843	upf3a	100	94.168	ENSHBUG00000011325	upf3a	99	94.372	Haplochromis_burtoni
ENSATEG00000005843	upf3a	82	54.707	ENSHGLG00000001544	UPF3A	93	54.962	Heterocephalus_glaber_female
ENSATEG00000005843	upf3a	82	54.707	ENSHGLG00100013244	UPF3A	93	54.962	Heterocephalus_glaber_male
ENSATEG00000005843	upf3a	97	79.425	ENSHCOG00000013985	upf3a	96	79.867	Hippocampus_comes
ENSATEG00000005843	upf3a	99	80.346	ENSIPUG00000023450	upf3a	100	80.346	Ictalurus_punctatus
ENSATEG00000005843	upf3a	100	92.672	ENSKMAG00000004381	upf3a	100	92.672	Kryptolebias_marmoratus
ENSATEG00000005843	upf3a	98	88.571	ENSLBEG00000021570	upf3a	100	89.278	Labrus_bergylta
ENSATEG00000005843	upf3a	60	43.988	ENSLACG00000006645	UPF3A	66	87.500	Latimeria_chalumnae
ENSATEG00000005843	upf3a	97	76.573	ENSLOCG00000002665	upf3a	98	76.573	Lepisosteus_oculatus
ENSATEG00000005843	upf3a	90	57.407	ENSMFAG00000045016	UPF3A	94	55.679	Macaca_fascicularis
ENSATEG00000005843	upf3a	87	59.420	ENSMMUG00000007449	UPF3A	94	58.525	Macaca_mulatta
ENSATEG00000005843	upf3a	83	61.917	ENSMNEG00000036402	UPF3A	82	60.759	Macaca_nemestrina
ENSATEG00000005843	upf3a	84	60.253	ENSMLEG00000014726	UPF3A	93	60.253	Mandrillus_leucophaeus
ENSATEG00000005843	upf3a	100	90.605	ENSMAMG00000018364	upf3a	100	90.605	Mastacembelus_armatus
ENSATEG00000005843	upf3a	100	90.852	ENSMZEG00005021571	upf3a	100	90.852	Maylandia_zebra
ENSATEG00000005843	upf3a	85	64.303	ENSMGAG00000014837	UPF3A	99	64.303	Meleagris_gallopavo
ENSATEG00000005843	upf3a	58	68.592	ENSMOCG00000000550	Upf3a	57	68.812	Microtus_ochrogaster
ENSATEG00000005843	upf3a	100	88.750	ENSMMOG00000019751	upf3a	100	88.750	Mola_mola
ENSATEG00000005843	upf3a	83	67.669	ENSMODG00000003159	UPF3A	98	65.957	Monodelphis_domestica
ENSATEG00000005843	upf3a	81	52.206	ENSMODG00000010232	UPF3B	93	50.980	Monodelphis_domestica
ENSATEG00000005843	upf3a	81	60.000	MGP_CAROLIEiJ_G0030848	Upf3a	88	57.702	Mus_caroli
ENSATEG00000005843	upf3a	81	59.737	ENSMUSG00000038398	Upf3a	89	59.737	Mus_musculus
ENSATEG00000005843	upf3a	81	60.526	MGP_PahariEiJ_G0021311	Upf3a	89	60.526	Mus_pahari
ENSATEG00000005843	upf3a	81	59.474	MGP_SPRETEiJ_G0031958	Upf3a	92	58.312	Mus_spretus
ENSATEG00000005843	upf3a	91	56.455	ENSMPUG00000009139	UPF3A	94	56.455	Mustela_putorius_furo
ENSATEG00000005843	upf3a	80	62.148	ENSMLUG00000015905	UPF3A	92	62.148	Myotis_lucifugus
ENSATEG00000005843	upf3a	84	56.716	ENSNGAG00000019314	Upf3a	95	56.716	Nannospalax_galili
ENSATEG00000005843	upf3a	100	94.384	ENSNBRG00000000828	upf3a	100	94.384	Neolamprologus_brichardi
ENSATEG00000005843	upf3a	88	58.824	ENSNLEG00000007563	UPF3A	91	58.295	Nomascus_leucogenys
ENSATEG00000005843	upf3a	100	93.562	ENSONIG00000006817	upf3a	100	93.562	Oreochromis_niloticus
ENSATEG00000005843	upf3a	76	57.880	ENSOANG00000006985	-	95	57.880	Ornithorhynchus_anatinus
ENSATEG00000005843	upf3a	80	51.872	ENSOCUG00000008450	UPF3A	88	48.832	Oryctolagus_cuniculus
ENSATEG00000005843	upf3a	100	85.867	ENSORLG00000010911	upf3a	100	85.867	Oryzias_latipes
ENSATEG00000005843	upf3a	82	43.204	ENSORLG00020003758	upf3b	51	68.243	Oryzias_latipes_hni
ENSATEG00000005843	upf3a	100	85.313	ENSORLG00020014317	upf3a	100	85.313	Oryzias_latipes_hni
ENSATEG00000005843	upf3a	100	85.961	ENSORLG00015017339	upf3a	58	85.961	Oryzias_latipes_hsok
ENSATEG00000005843	upf3a	100	88.337	ENSOMEG00000014425	upf3a	100	88.337	Oryzias_melastigma
ENSATEG00000005843	upf3a	75	61.281	ENSOGAG00000004788	UPF3A	84	62.178	Otolemur_garnettii
ENSATEG00000005843	upf3a	83	57.960	ENSOARG00000009004	UPF3A	84	57.855	Ovis_aries
ENSATEG00000005843	upf3a	88	57.968	ENSPPAG00000042267	UPF3A	91	58.199	Pan_paniscus
ENSATEG00000005843	upf3a	90	58.784	ENSPPRG00000025062	UPF3A	92	58.784	Panthera_pardus
ENSATEG00000005843	upf3a	80	49.202	ENSPTRG00000041835	-	85	49.468	Pan_troglodytes
ENSATEG00000005843	upf3a	80	45.974	ENSPTRG00000051640	-	85	48.446	Pan_troglodytes
ENSATEG00000005843	upf3a	80	49.870	ENSPTRG00000041187	-	86	49.219	Pan_troglodytes
ENSATEG00000005843	upf3a	88	57.968	ENSPTRG00000006073	UPF3A	91	58.199	Pan_troglodytes
ENSATEG00000005843	upf3a	88	60.377	ENSPANG00000004346	UPF3A	90	60.142	Papio_anubis
ENSATEG00000005843	upf3a	89	50.000	ENSPKIG00000019226	upf3b	92	66.443	Paramormyrops_kingsleyae
ENSATEG00000005843	upf3a	99	70.101	ENSPKIG00000004422	upf3a	100	70.101	Paramormyrops_kingsleyae
ENSATEG00000005843	upf3a	83	68.434	ENSPSIG00000007468	UPF3A	96	68.434	Pelodiscus_sinensis
ENSATEG00000005843	upf3a	100	83.299	ENSPMGG00000012696	upf3a	100	83.299	Periophthalmus_magnuspinnatus
ENSATEG00000005843	upf3a	81	60.422	ENSPEMG00000019968	-	89	60.422	Peromyscus_maniculatus_bairdii
ENSATEG00000005843	upf3a	89	45.309	ENSPCIG00000028914	UPF3B	88	44.706	Phascolarctos_cinereus
ENSATEG00000005843	upf3a	73	70.044	ENSPCIG00000019590	-	90	68.116	Phascolarctos_cinereus
ENSATEG00000005843	upf3a	100	89.201	ENSPFOG00000013222	upf3a	100	89.201	Poecilia_formosa
ENSATEG00000005843	upf3a	98	87.965	ENSPLAG00000011960	upf3a	100	87.965	Poecilia_latipinna
ENSATEG00000005843	upf3a	100	85.093	ENSPMEG00000000836	upf3a	100	85.093	Poecilia_mexicana
ENSATEG00000005843	upf3a	88	57.968	ENSPPYG00000005536	UPF3A	91	58.199	Pongo_abelii
ENSATEG00000005843	upf3a	56	61.868	ENSPCAG00000013124	UPF3A	66	55.238	Procavia_capensis
ENSATEG00000005843	upf3a	85	44.811	ENSPCOG00000021960	UPF3B	55	67.797	Propithecus_coquereli
ENSATEG00000005843	upf3a	86	55.684	ENSPVAG00000005656	UPF3A	88	55.684	Pteropus_vampyrus
ENSATEG00000005843	upf3a	100	90.852	ENSPNYG00000011289	upf3a	100	90.852	Pundamilia_nyererei
ENSATEG00000005843	upf3a	99	82.251	ENSPNAG00000019532	upf3a	99	83.077	Pygocentrus_nattereri
ENSATEG00000005843	upf3a	83	51.544	ENSPNAG00000021528	upf3b	54	72.393	Pygocentrus_nattereri
ENSATEG00000005843	upf3a	73	62.832	ENSRNOG00000017397	Upf3a	83	62.832	Rattus_norvegicus
ENSATEG00000005843	upf3a	87	59.360	ENSRBIG00000034007	UPF3A	92	59.169	Rhinopithecus_bieti
ENSATEG00000005843	upf3a	84	60.406	ENSRROG00000012212	UPF3A	84	60.406	Rhinopithecus_roxellana
ENSATEG00000005843	upf3a	75	57.660	ENSSBOG00000029989	UPF3A	96	49.676	Saimiri_boliviensis_boliviensis
ENSATEG00000005843	upf3a	82	45.455	ENSSBOG00000019740	UPF3B	78	69.939	Saimiri_boliviensis_boliviensis
ENSATEG00000005843	upf3a	83	68.182	ENSSHAG00000009895	UPF3A	94	68.262	Sarcophilus_harrisii
ENSATEG00000005843	upf3a	99	71.058	ENSSFOG00015021851	upf3a	100	70.410	Scleropages_formosus
ENSATEG00000005843	upf3a	53	66.016	ENSSMAG00000012913	upf3b	55	69.822	Scophthalmus_maximus
ENSATEG00000005843	upf3a	100	84.318	ENSSMAG00000003858	upf3a	100	85.540	Scophthalmus_maximus
ENSATEG00000005843	upf3a	100	91.649	ENSSDUG00000009680	upf3a	100	91.649	Seriola_dumerili
ENSATEG00000005843	upf3a	100	94.816	ENSSLDG00000009700	upf3a	100	94.816	Seriola_lalandi_dorsalis
ENSATEG00000005843	upf3a	79	50.656	ENSSARG00000007262	UPF3A	92	49.606	Sorex_araneus
ENSATEG00000005843	upf3a	100	94.168	ENSSPAG00000007938	upf3a	100	90.644	Stegastes_partitus
ENSATEG00000005843	upf3a	81	58.929	ENSSSCG00000024679	UPF3A	78	58.929	Sus_scrofa
ENSATEG00000005843	upf3a	82	68.354	ENSTGUG00000009493	UPF3A	99	68.354	Taeniopygia_guttata
ENSATEG00000005843	upf3a	100	84.449	ENSTRUG00000012730	upf3a	99	85.055	Takifugu_rubripes
ENSATEG00000005843	upf3a	83	77.411	ENSTNIG00000014973	upf3a	100	76.904	Tetraodon_nigroviridis
ENSATEG00000005843	upf3a	78	53.968	ENSTTRG00000015414	UPF3A	78	53.968	Tursiops_truncatus
ENSATEG00000005843	upf3a	82	46.135	ENSUAMG00000024565	UPF3B	65	66.667	Ursus_americanus
ENSATEG00000005843	upf3a	80	59.530	ENSVPAG00000003525	UPF3A	94	59.530	Vicugna_pacos
ENSATEG00000005843	upf3a	82	46.366	ENSVVUG00000011594	UPF3B	83	67.416	Vulpes_vulpes
ENSATEG00000005843	upf3a	83	57.683	ENSVVUG00000013538	UPF3A	88	54.176	Vulpes_vulpes
ENSATEG00000005843	upf3a	90	57.009	ENSXETG00000002572	upf3a	100	57.009	Xenopus_tropicalis
ENSATEG00000005843	upf3a	83	45.792	ENSXETG00000007440	upf3b	71	71.779	Xenopus_tropicalis
ENSATEG00000005843	upf3a	100	89.224	ENSXMAG00000013452	upf3a	100	89.224	Xiphophorus_maculatus