EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000006254 (Gene tree)
Gene ID: 113160589
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 16229 bases
Position: chrOOHO01000011.1:19913681-19929909
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000008865	Nucleoplasmin	PF03066.15	8.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000009024	-	4115	-	ENSATEP00000008865	299 (aa)	-	-

Gene Model

Click here to download ENSATEG00000006254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000006254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000006254	npm1b	95	43.333	ENSATEG00000008885	npm1a	95	42.953
ENSATEG00000006254	npm1b	51	32.026	ENSATEG00000022752	npm3	71	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000006254	npm1b	100	86.288	ENSAPOG00000004268	npm1b	100	85.953	Acanthochromis_polyacanthus
ENSATEG00000006254	npm1b	100	85.619	ENSAOCG00000012549	npm1b	100	85.284	Amphiprion_ocellaris
ENSATEG00000006254	npm1b	100	84.615	ENSAPEG00000000868	npm1b	100	84.281	Amphiprion_percula
ENSATEG00000006254	npm1b	95	44.898	ENSACAG00000015626	-	96	41.924	Anolis_carolinensis
ENSATEG00000006254	npm1b	98	66.000	ENSAMXG00000042148	npm1b	99	61.333	Astyanax_mexicanus
ENSATEG00000006254	npm1b	96	44.000	ENSCPBG00000021221	-	58	45.455	Chrysemys_picta_bellii
ENSATEG00000006254	npm1b	100	80.667	ENSCSEG00000004530	npm1b	100	80.000	Cynoglossus_semilaevis
ENSATEG00000006254	npm1b	100	78.595	ENSCVAG00000013016	npm1b	100	78.595	Cyprinodon_variegatus
ENSATEG00000006254	npm1b	99	65.017	ENSDARG00000037675	npm1b	99	63.245	Danio_rerio
ENSATEG00000006254	npm1b	99	64.803	ENSELUG00000022123	npm1b	99	64.803	Esox_lucius
ENSATEG00000006254	npm1b	94	44.710	ENSFALG00000003320	-	94	41.667	Ficedula_albicollis
ENSATEG00000006254	npm1b	100	78.073	ENSFHEG00000020794	npm1b	100	78.073	Fundulus_heteroclitus
ENSATEG00000006254	npm1b	98	63.514	ENSGMOG00000002689	npm1b	100	62.712	Gadus_morhua
ENSATEG00000006254	npm1b	98	44.951	ENSGALG00000002197	-	73	39.308	Gallus_gallus
ENSATEG00000006254	npm1b	100	77.592	ENSGAFG00000017709	npm1b	100	77.592	Gambusia_affinis
ENSATEG00000006254	npm1b	98	82.313	ENSGACG00000016706	npm1b	100	81.973	Gasterosteus_aculeatus
ENSATEG00000006254	npm1b	95	45.638	ENSGAGG00000020250	-	96	42.230	Gopherus_agassizii
ENSATEG00000006254	npm1b	100	83.278	ENSHBUG00000019903	npm1b	95	83.278	Haplochromis_burtoni
ENSATEG00000006254	npm1b	100	75.667	ENSHCOG00000003895	npm1b	100	75.667	Hippocampus_comes
ENSATEG00000006254	npm1b	99	61.639	ENSIPUG00000020165	npm1b	99	59.801	Ictalurus_punctatus
ENSATEG00000006254	npm1b	99	81.017	ENSKMAG00000008260	npm1b	99	81.356	Kryptolebias_marmoratus
ENSATEG00000006254	npm1b	64	85.938	ENSLBEG00000001304	-	94	85.417	Labrus_bergylta
ENSATEG00000006254	npm1b	94	41.234	ENSLACG00000001779	-	100	39.661	Latimeria_chalumnae
ENSATEG00000006254	npm1b	93	47.297	ENSLOCG00000001942	npm1b	100	47.811	Lepisosteus_oculatus
ENSATEG00000006254	npm1b	72	87.215	ENSMAMG00000015335	npm1b	100	87.671	Mastacembelus_armatus
ENSATEG00000006254	npm1b	93	44.912	ENSMGAG00000001591	-	100	40.614	Meleagris_gallopavo
ENSATEG00000006254	npm1b	81	87.243	ENSMALG00000015383	npm1b	100	89.712	Monopterus_albus
ENSATEG00000006254	npm1b	99	73.203	ENSONIG00000001397	npm1b	98	75.490	Oreochromis_niloticus
ENSATEG00000006254	npm1b	100	66.890	ENSOMEG00000003414	npm1b	100	66.221	Oryzias_melastigma
ENSATEG00000006254	npm1b	99	58.544	ENSPKIG00000020050	npm1b	99	55.414	Paramormyrops_kingsleyae
ENSATEG00000006254	npm1b	96	47.333	ENSPSIG00000011204	-	92	45.085	Pelodiscus_sinensis
ENSATEG00000006254	npm1b	100	78.261	ENSPFOG00000018357	npm1b	100	78.261	Poecilia_formosa
ENSATEG00000006254	npm1b	98	62.876	ENSPNAG00000005498	npm1b	99	59.532	Pygocentrus_nattereri
ENSATEG00000006254	npm1b	99	57.377	ENSSFOG00015005064	npm1b	100	59.197	Scleropages_formosus
ENSATEG00000006254	npm1b	100	83.612	ENSSMAG00000008088	npm1b	100	83.278	Scophthalmus_maximus
ENSATEG00000006254	npm1b	100	88.294	ENSSDUG00000007726	npm1b	100	88.294	Seriola_dumerili
ENSATEG00000006254	npm1b	100	87.960	ENSSLDG00000021396	npm1b	100	87.960	Seriola_lalandi_dorsalis
ENSATEG00000006254	npm1b	100	87.960	ENSSPAG00000011152	npm1b	100	87.625	Stegastes_partitus
ENSATEG00000006254	npm1b	93	44.674	ENSTGUG00000014970	-	100	41.522	Taeniopygia_guttata
ENSATEG00000006254	npm1b	100	79.734	ENSTRUG00000008105	npm1b	95	79.402	Takifugu_rubripes
ENSATEG00000006254	npm1b	99	74.751	ENSTNIG00000013057	npm1b	100	73.090	Tetraodon_nigroviridis
ENSATEG00000006254	npm1b	98	43.648	ENSXETG00000008403	npm1	99	36.792	Xenopus_tropicalis
ENSATEG00000006254	npm1b	100	78.930	ENSXMAG00000001986	npm1b	100	78.930	Xiphophorus_maculatus