EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSATEG00000006443 (Gene tree)
Gene ID
113169702
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Anabas_testudineus
Status
putative
Strand
Plus strand
Length
33683 bases
Position
chrOOHO01000006.1:14485934-14519616
Accession
113169702
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSATEP00000009151tRNA_anti-codonPF01336.251.4e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSATET00000009310RPA1 (1 of many)-2012667XM_026371313ENSATEP00000009151651 (aa)XP_026227098UPI000E458AF0
Gene Model
Click here to download ENSATEG00000006443's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000006443's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSATEG00000006443RPA18270.655ENSATEG00000022024rpa19570.655
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSATEG00000006443RPA110076.411ENSAPOG00000019409RPA110077.135Acanthochromis_polyacanthus
ENSATEG00000006443RPA19960.587ENSAPOG00000011658rpa19472.286Acanthochromis_polyacanthus
ENSATEG00000006443RPA19756.013ENSAMEG00000007706RPA19656.013Ailuropoda_melanoleuca
ENSATEG00000006443RPA19653.514ENSACIG00000007277rpa19953.514Amphilophus_citrinellus
ENSATEG00000006443RPA19679.459ENSACIG00000012881RPA19979.459Amphilophus_citrinellus
ENSATEG00000006443RPA19960.526ENSAOCG00000023376rpa19671.171Amphiprion_ocellaris
ENSATEG00000006443RPA110079.148ENSAOCG00000009003RPA110079.909Amphiprion_ocellaris
ENSATEG00000006443RPA19960.372ENSAPEG00000008634rpa19671.719Amphiprion_percula
ENSATEG00000006443RPA110079.819ENSAPEG00000019132RPA110080.572Amphiprion_percula
ENSATEG00000006443RPA19849.022ENSAPLG00000012442RPA110049.441Anas_platyrhynchos
ENSATEG00000006443RPA18659.732ENSACAG00000014490RPA19950.306Anolis_carolinensis
ENSATEG00000006443RPA19755.608ENSANAG00000023456RPA19866.051Aotus_nancymaae
ENSATEG00000006443RPA19461.111ENSACLG00000006640rpa19961.111Astatotilapia_calliptera
ENSATEG00000006443RPA19979.421ENSACLG00000005223RPA19979.268Astatotilapia_calliptera
ENSATEG00000006443RPA110060.215ENSAMXG00000008418rpa19959.908Astyanax_mexicanus
ENSATEG00000006443RPA110054.434ENSBTAG00000009711RPA19954.434Bos_taurus
ENSATEG00000006443RPA110053.517ENSCJAG00000001848RPA19954.587Callithrix_jacchus
ENSATEG00000006443RPA19954.058ENSCAFG00000019249RPA19954.824Canis_familiaris
ENSATEG00000006443RPA19954.058ENSCAFG00020009847RPA19954.824Canis_lupus_dingo
ENSATEG00000006443RPA110051.807ENSCHIG00000026308RPA19954.128Capra_hircus
ENSATEG00000006443RPA19954.364ENSTSYG00000003482-9954.364Carlito_syrichta
ENSATEG00000006443RPA19954.893ENSCPOG00000000035RPA19954.893Cavia_porcellus
ENSATEG00000006443RPA110045.107ENSCCAG00000010981RPA19946.177Cebus_capucinus
ENSATEG00000006443RPA19951.994ENSCLAG00000015045-9951.994Chinchilla_lanigera
ENSATEG00000006443RPA19954.977ENSCLAG00000005185-9954.977Chinchilla_lanigera
ENSATEG00000006443RPA110044.801ENSCSAG00000013833RPA19946.177Chlorocebus_sabaeus
ENSATEG00000006443RPA16666.051ENSCHOG00000009454-9966.051Choloepus_hoffmanni
ENSATEG00000006443RPA19655.360ENSCHOG00000013540-9955.360Choloepus_hoffmanni
ENSATEG00000006443RPA19955.368ENSCPBG00000020377RPA19956.743Chrysemys_picta_bellii
ENSATEG00000006443RPA19941.604ENSCING00000023482-9941.604Ciona_intestinalis
ENSATEG00000006443RPA18766.359ENSCANG00000030911RPA19866.359Colobus_angolensis_palliatus
ENSATEG00000006443RPA19954.824ENSCGRG00001008197Rpa19954.824Cricetulus_griseus_chok1gshd
ENSATEG00000006443RPA16665.893ENSCGRG00000000582Rpa18465.893Cricetulus_griseus_crigri
ENSATEG00000006443RPA19958.089ENSCSEG00000013066rpa19069.213Cynoglossus_semilaevis
ENSATEG00000006443RPA110068.098ENSCSEG00000012726RPA19968.750Cynoglossus_semilaevis
ENSATEG00000006443RPA19673.538ENSCVAG00000013446-9673.538Cyprinodon_variegatus
ENSATEG00000006443RPA19959.938ENSCVAG00000019431rpa19960.984Cyprinodon_variegatus
ENSATEG00000006443RPA110059.418ENSDARG00000003938rpa19959.418Danio_rerio
ENSATEG00000006443RPA19954.884ENSDNOG00000017218RPA19854.884Dasypus_novemcinctus
ENSATEG00000006443RPA19954.671ENSDORG00000006199Rpa19954.671Dipodomys_ordii
ENSATEG00000006443RPA18644.419FBgn0010173RpA-709444.884Drosophila_melanogaster
ENSATEG00000006443RPA18464.948ENSETEG00000017608RPA18264.948Echinops_telfairi
ENSATEG00000006443RPA19655.962ENSEASG00005009372RPA19965.509Equus_asinus_asinus
ENSATEG00000006443RPA19955.283ENSECAG00000023886RPA19955.283Equus_caballus
ENSATEG00000006443RPA16465.155ENSEEUG00000002186-6865.155Erinaceus_europaeus
ENSATEG00000006443RPA110059.480ENSELUG00000021071rpa19959.174Esox_lucius
ENSATEG00000006443RPA17575.779ENSELUG00000006136RPA19675.779Esox_lucius
ENSATEG00000006443RPA19954.977ENSFCAG00000006306RPA19954.977Felis_catus
ENSATEG00000006443RPA19954.740ENSFALG00000006575RPA19954.740Ficedula_albicollis
ENSATEG00000006443RPA19955.283ENSFDAG00000007720RPA19955.283Fukomys_damarensis
ENSATEG00000006443RPA19959.259ENSFHEG00000003580rpa19959.259Fundulus_heteroclitus
ENSATEG00000006443RPA18870.833ENSGMOG00000010382rpa19970.833Gadus_morhua
ENSATEG00000006443RPA19955.099ENSGALG00000003072RPA19955.099Gallus_gallus
ENSATEG00000006443RPA19959.351ENSGAFG00000012916rpa19959.351Gambusia_affinis
ENSATEG00000006443RPA19974.811ENSGAFG00000020953RPA19975.264Gambusia_affinis
ENSATEG00000006443RPA19958.423ENSGACG00000010856rpa19958.423Gasterosteus_aculeatus
ENSATEG00000006443RPA19955.368ENSGAGG00000013611RPA19955.368Gopherus_agassizii
ENSATEG00000006443RPA18965.820ENSGGOG00000014186RPA19965.820Gorilla_gorilla
ENSATEG00000006443RPA19664.115ENSHBUG00000009348RPA19864.115Haplochromis_burtoni
ENSATEG00000006443RPA19961.051ENSHBUG00000017773rpa19961.051Haplochromis_burtoni
ENSATEG00000006443RPA19954.671ENSHGLG00000008846RPA110055.283Heterocephalus_glaber_female
ENSATEG00000006443RPA19954.671ENSHGLG00100017755-10055.283Heterocephalus_glaber_male
ENSATEG00000006443RPA19950.534ENSHGLG00100000799-9950.534Heterocephalus_glaber_male
ENSATEG00000006443RPA19945.859ENSHGLG00100002005-9946.260Heterocephalus_glaber_male
ENSATEG00000006443RPA19954.671ENSHCOG00000001401rpa19955.247Hippocampus_comes
ENSATEG00000006443RPA18957.783ENSHCOG00000000351RPA19857.783Hippocampus_comes
ENSATEG00000006443RPA110059.754ENSIPUG00000004400rpa19959.754Ictalurus_punctatus
ENSATEG00000006443RPA19154.319ENSSTOG00000022475RPA19454.319Ictidomys_tridecemlineatus
ENSATEG00000006443RPA19655.573ENSJJAG00000000876Rpa19855.573Jaculus_jaculus
ENSATEG00000006443RPA19959.385ENSKMAG00000005605rpa19959.538Kryptolebias_marmoratus
ENSATEG00000006443RPA19973.089ENSKMAG00000000234RPA19972.783Kryptolebias_marmoratus
ENSATEG00000006443RPA19958.552ENSLBEG00000021604rpa19867.756Labrus_bergylta
ENSATEG00000006443RPA19974.858ENSLBEG00000002281RPA19974.716Labrus_bergylta
ENSATEG00000006443RPA17257.415ENSLACG00000007210RPA19557.415Latimeria_chalumnae
ENSATEG00000006443RPA110059.356ENSLOCG00000006397rpa19959.356Lepisosteus_oculatus
ENSATEG00000006443RPA19754.474ENSLAFG00000015354RPA19952.065Loxodonta_africana
ENSATEG00000006443RPA18252.434ENSMFAG00000036138-9854.120Macaca_fascicularis
ENSATEG00000006443RPA110050.534ENSMMUG00000002442-9950.534Macaca_mulatta
ENSATEG00000006443RPA19754.272ENSMMUG00000011604-9855.380Macaca_mulatta
ENSATEG00000006443RPA17861.239ENSMNEG00000029837-9361.239Macaca_nemestrina
ENSATEG00000006443RPA19653.822ENSMNEG00000031632-9854.936Macaca_nemestrina
ENSATEG00000006443RPA19750.079ENSMLEG00000038768-9851.496Mandrillus_leucophaeus
ENSATEG00000006443RPA19959.505ENSMAMG00000017993rpa19970.833Mastacembelus_armatus
ENSATEG00000006443RPA19982.143ENSMAMG00000020097RPA19982.143Mastacembelus_armatus
ENSATEG00000006443RPA19979.421ENSMZEG00005024731RPA19979.268Maylandia_zebra
ENSATEG00000006443RPA19960.896ENSMZEG00005007551rpa19960.896Maylandia_zebra
ENSATEG00000006443RPA19954.391ENSMGAG00000005315RPA19854.391Meleagris_gallopavo
ENSATEG00000006443RPA19655.008ENSMAUG00000010474Rpa19855.962Mesocricetus_auratus
ENSATEG00000006443RPA19954.839ENSMICG00000012867RPA19955.352Microcebus_murinus
ENSATEG00000006443RPA19954.224ENSMOCG00000013019Rpa19954.224Microtus_ochrogaster
ENSATEG00000006443RPA19959.505ENSMMOG00000014292rpa19960.890Mola_mola
ENSATEG00000006443RPA18982.798ENSMMOG00000010868RPA19882.798Mola_mola
ENSATEG00000006443RPA110055.046ENSMODG00000010549RPA19955.046Monodelphis_domestica
ENSATEG00000006443RPA110072.879ENSMALG00000001208RPA110072.323Monopterus_albus
ENSATEG00000006443RPA19959.006ENSMALG00000011453rpa19959.006Monopterus_albus
ENSATEG00000006443RPA19955.300MGP_CAROLIEiJ_G0016734Rpa19955.300Mus_caroli
ENSATEG00000006443RPA19954.490ENSMUSG00000000751Rpa19954.490Mus_musculus
ENSATEG00000006443RPA19954.839MGP_PahariEiJ_G0017871Rpa19954.893Mus_pahari
ENSATEG00000006443RPA19954.559MGP_SPRETEiJ_G0017577Rpa19954.559Mus_spretus
ENSATEG00000006443RPA19954.364ENSMPUG00000013119RPA19954.364Mustela_putorius_furo
ENSATEG00000006443RPA19755.380ENSMLUG00000006113RPA19555.380Myotis_lucifugus
ENSATEG00000006443RPA19655.079ENSNGAG00000004522Rpa19455.079Nannospalax_galili
ENSATEG00000006443RPA19871.451ENSNBRG00000009672RPA19771.451Neolamprologus_brichardi
ENSATEG00000006443RPA19560.616ENSNBRG00000020595rpa19960.616Neolamprologus_brichardi
ENSATEG00000006443RPA19953.905ENSNLEG00000017149RPA19954.186Nomascus_leucogenys
ENSATEG00000006443RPA19748.418ENSMEUG00000006714RPA19848.418Notamacropus_eugenii
ENSATEG00000006443RPA19655.821ENSODEG00000009038RPA19655.821Octodon_degus
ENSATEG00000006443RPA19960.433ENSONIG00000013135rpa19960.433Oreochromis_niloticus
ENSATEG00000006443RPA19854.930ENSOANG00000010880RPA19954.930Ornithorhynchus_anatinus
ENSATEG00000006443RPA110052.444ENSOCUG00000001504RPA19952.444Oryctolagus_cuniculus
ENSATEG00000006443RPA19973.692ENSORLG00000003368RPA19973.692Oryzias_latipes
ENSATEG00000006443RPA19959.133ENSORLG00000004856rpa19959.133Oryzias_latipes
ENSATEG00000006443RPA19959.598ENSORLG00020008980rpa19959.598Oryzias_latipes_hni
ENSATEG00000006443RPA19973.185ENSORLG00020015284RPA19973.185Oryzias_latipes_hni
ENSATEG00000006443RPA19959.598ENSORLG00015013982rpa19959.598Oryzias_latipes_hsok
ENSATEG00000006443RPA19973.002ENSORLG00015020383RPA19973.002Oryzias_latipes_hsok
ENSATEG00000006443RPA16780.455ENSORLG00015005867-9980.455Oryzias_latipes_hsok
ENSATEG00000006443RPA19958.359ENSOMEG00000004704rpa19865.741Oryzias_melastigma
ENSATEG00000006443RPA19967.879ENSOMEG00000011040RPA19870.701Oryzias_melastigma
ENSATEG00000006443RPA19954.893ENSOGAG00000005581-9954.893Otolemur_garnettii
ENSATEG00000006443RPA17865.241ENSOGAG00000029379-9965.241Otolemur_garnettii
ENSATEG00000006443RPA110050.301ENSOARG00000014479RPA19954.281Ovis_aries
ENSATEG00000006443RPA19953.752ENSPPAG00000039680RPA19954.977Pan_paniscus
ENSATEG00000006443RPA19954.977ENSPPRG00000011807RPA19954.977Panthera_pardus
ENSATEG00000006443RPA19954.977ENSPTIG00000007898RPA19954.977Panthera_tigris_altaica
ENSATEG00000006443RPA19953.905ENSPTRG00000008539RPA19954.824Pan_troglodytes
ENSATEG00000006443RPA110053.364ENSPANG00000024592RPA19954.587Papio_anubis
ENSATEG00000006443RPA19559.677ENSPKIG00000008053rpa19460.193Paramormyrops_kingsleyae
ENSATEG00000006443RPA19755.151ENSPSIG00000015617RPA19855.151Pelodiscus_sinensis
ENSATEG00000006443RPA110065.554ENSPMGG00000000543RPA19968.914Periophthalmus_magnuspinnatus
ENSATEG00000006443RPA19957.935ENSPMGG00000011589rpa19957.935Periophthalmus_magnuspinnatus
ENSATEG00000006443RPA19954.839ENSPEMG00000021061Rpa19954.839Peromyscus_maniculatus_bairdii
ENSATEG00000006443RPA110054.587ENSPCIG00000019049RPA19955.199Phascolarctos_cinereus
ENSATEG00000006443RPA19959.692ENSPFOG00000003987rpa19959.692Poecilia_formosa
ENSATEG00000006443RPA19959.692ENSPLAG00000004984rpa19959.692Poecilia_latipinna
ENSATEG00000006443RPA19574.920ENSPLAG00000008844-9774.920Poecilia_latipinna
ENSATEG00000006443RPA19575.080ENSPMEG00000003627-9775.559Poecilia_mexicana
ENSATEG00000006443RPA19959.692ENSPMEG00000020602rpa19960.000Poecilia_mexicana
ENSATEG00000006443RPA19452.666ENSPREG00000010174rpa19652.666Poecilia_reticulata
ENSATEG00000006443RPA19972.182ENSPREG00000010119RPA110072.393Poecilia_reticulata
ENSATEG00000006443RPA19954.601ENSPCOG00000001799RPA19954.601Propithecus_coquereli
ENSATEG00000006443RPA19954.824ENSPVAG00000002149RPA19954.824Pteropus_vampyrus
ENSATEG00000006443RPA19979.573ENSPNYG00000024165RPA19979.421Pundamilia_nyererei
ENSATEG00000006443RPA19961.051ENSPNYG00000016316rpa19961.075Pundamilia_nyererei
ENSATEG00000006443RPA110052.680ENSPNAG00000008599rpa19953.272Pygocentrus_nattereri
ENSATEG00000006443RPA19662.136ENSRNOG00000003123Rpa19955.300Rattus_norvegicus
ENSATEG00000006443RPA110054.434ENSRBIG00000036587RPA19954.434Rhinopithecus_bieti
ENSATEG00000006443RPA110051.223ENSRROG00000043278RPA19951.223Rhinopithecus_roxellana
ENSATEG00000006443RPA19255.426ENSSBOG00000030233RPA19756.427Saimiri_boliviensis_boliviensis
ENSATEG00000006443RPA19756.329ENSSHAG00000007969RPA19656.962Sarcophilus_harrisii
ENSATEG00000006443RPA110062.423ENSSFOG00015005362rpa19262.423Scleropages_formosus
ENSATEG00000006443RPA110079.154ENSSMAG00000019746RPA110079.456Scophthalmus_maximus
ENSATEG00000006443RPA110081.176ENSSDUG00000016358RPA110081.324Seriola_dumerili
ENSATEG00000006443RPA19960.742ENSSDUG00000011949rpa19960.742Seriola_dumerili
ENSATEG00000006443RPA19960.433ENSSLDG00000011806rpa19960.433Seriola_lalandi_dorsalis
ENSATEG00000006443RPA110080.292ENSSLDG00000020784RPA110080.292Seriola_lalandi_dorsalis
ENSATEG00000006443RPA18763.636ENSSARG00000007506RPA18763.636Sorex_araneus
ENSATEG00000006443RPA19753.006ENSSPUG00000007223RPA19853.006Sphenodon_punctatus
ENSATEG00000006443RPA19960.124ENSSPAG00000009903rpa19960.124Stegastes_partitus
ENSATEG00000006443RPA19974.455ENSSPAG00000011165RPA110072.504Stegastes_partitus
ENSATEG00000006443RPA19755.063ENSSSCG00000017822RPA19566.051Sus_scrofa
ENSATEG00000006443RPA19954.601ENSTGUG00000005775RPA19954.601Taeniopygia_guttata
ENSATEG00000006443RPA19958.669ENSTRUG00000003616rpa19958.669Takifugu_rubripes
ENSATEG00000006443RPA19968.750ENSTRUG00000000405RPA19969.306Takifugu_rubripes
ENSATEG00000006443RPA19959.722ENSTNIG00000016199rpa19959.722Tetraodon_nigroviridis
ENSATEG00000006443RPA16666.129ENSTBEG00000002709RPA17366.129Tupaia_belangeri
ENSATEG00000006443RPA110053.211ENSTTRG00000001169RPA19954.128Tursiops_truncatus
ENSATEG00000006443RPA18776.923ENSUAMG00000015676RPA19576.923Ursus_americanus
ENSATEG00000006443RPA18965.509ENSUMAG00000009328RPA19965.509Ursus_maritimus
ENSATEG00000006443RPA19953.715ENSVPAG00000009443RPA19953.715Vicugna_pacos
ENSATEG00000006443RPA19954.058ENSVVUG00000021715RPA19954.058Vulpes_vulpes
ENSATEG00000006443RPA18566.515ENSXETG00000013538rpa19956.173Xenopus_tropicalis
ENSATEG00000006443RPA19457.307ENSXCOG00000010068rpa19458.206Xiphophorus_couchianus
ENSATEG00000006443RPA19670.418ENSXCOG00000009899-9970.418Xiphophorus_couchianus
ENSATEG00000006443RPA19969.830ENSXMAG00000010333RPA19969.972Xiphophorus_maculatus
ENSATEG00000006443RPA19958.218ENSXMAG00000004102rpa19958.592Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us