EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000006830 (Gene tree)
Gene ID: 113158556
Gene Symbol: smndc1
Alias: TDRD10|spf30|wu:fb37h07|wu:fc23a07
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 5505 bases
Position: chrOOHO01000014.1:13047914-13053418
Accession: 113158556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000009742	TUDOR	PF00567.24	1.1e-06	1	1
ENSATEP00000009742	SMN	PF06003.12	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000009918	-	1264	XM_026354535	ENSATEP00000009742	238 (aa)	XP_026210320	UPI000E45FAC5

Gene Model

Click here to download ENSATEG00000006830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000006830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000006830	smndc1	100	76.471	ENSG00000119953	SMNDC1	100	76.471	Homo_sapiens
ENSATEG00000006830	smndc1	100	92.857	ENSAPOG00000021772	smndc1	100	92.857	Acanthochromis_polyacanthus
ENSATEG00000006830	smndc1	100	76.050	ENSAMEG00000005251	SMNDC1	100	76.050	Ailuropoda_melanoleuca
ENSATEG00000006830	smndc1	100	93.277	ENSACIG00000004819	smndc1	100	93.277	Amphilophus_citrinellus
ENSATEG00000006830	smndc1	100	91.597	ENSAOCG00000017869	smndc1	100	91.597	Amphiprion_ocellaris
ENSATEG00000006830	smndc1	100	91.597	ENSAPEG00000007752	smndc1	100	91.597	Amphiprion_percula
ENSATEG00000006830	smndc1	83	76.263	ENSAPLG00000004322	SMNDC1	100	76.263	Anas_platyrhynchos
ENSATEG00000006830	smndc1	100	76.891	ENSACAG00000005983	SMNDC1	100	76.891	Anolis_carolinensis
ENSATEG00000006830	smndc1	100	76.050	ENSANAG00000032875	SMNDC1	100	76.050	Aotus_nancymaae
ENSATEG00000006830	smndc1	100	91.597	ENSACLG00000016360	smndc1	100	91.597	Astatotilapia_calliptera
ENSATEG00000006830	smndc1	100	81.933	ENSAMXG00000020310	smndc1	100	81.933	Astyanax_mexicanus
ENSATEG00000006830	smndc1	100	77.824	ENSBTAG00000000551	SMNDC1	100	77.824	Bos_taurus
ENSATEG00000006830	smndc1	100	76.050	ENSCJAG00000018624	SMNDC1	100	76.050	Callithrix_jacchus
ENSATEG00000006830	smndc1	100	76.050	ENSCAFG00000010720	SMNDC1	100	76.050	Canis_familiaris
ENSATEG00000006830	smndc1	100	76.050	ENSCAFG00020011913	SMNDC1	100	76.050	Canis_lupus_dingo
ENSATEG00000006830	smndc1	100	77.824	ENSCHIG00000010604	SMNDC1	100	77.824	Capra_hircus
ENSATEG00000006830	smndc1	100	76.050	ENSTSYG00000026454	SMNDC1	100	76.050	Carlito_syrichta
ENSATEG00000006830	smndc1	100	62.500	ENSCAPG00000009132	SMNDC1	100	72.637	Cavia_aperea
ENSATEG00000006830	smndc1	100	76.050	ENSCPOG00000031666	SMNDC1	100	76.050	Cavia_porcellus
ENSATEG00000006830	smndc1	100	76.050	ENSCCAG00000021793	SMNDC1	100	76.050	Cebus_capucinus
ENSATEG00000006830	smndc1	100	75.630	ENSCATG00000035910	SMNDC1	100	75.630	Cercocebus_atys
ENSATEG00000006830	smndc1	100	76.050	ENSCLAG00000002838	SMNDC1	100	76.050	Chinchilla_lanigera
ENSATEG00000006830	smndc1	100	76.050	ENSCSAG00000005169	SMNDC1	100	76.050	Chlorocebus_sabaeus
ENSATEG00000006830	smndc1	81	71.503	ENSCHOG00000002936	SMNDC1	100	71.503	Choloepus_hoffmanni
ENSATEG00000006830	smndc1	100	76.471	ENSCPBG00000012837	SMNDC1	100	76.471	Chrysemys_picta_bellii
ENSATEG00000006830	smndc1	100	70.168	ENSCANG00000034620	-	100	70.168	Colobus_angolensis_palliatus
ENSATEG00000006830	smndc1	100	60.669	ENSCANG00000036994	-	100	60.669	Colobus_angolensis_palliatus
ENSATEG00000006830	smndc1	100	76.050	ENSCANG00000031720	-	100	76.050	Colobus_angolensis_palliatus
ENSATEG00000006830	smndc1	100	76.471	ENSCGRG00001012973	Smndc1	100	76.471	Cricetulus_griseus_chok1gshd
ENSATEG00000006830	smndc1	100	76.471	ENSCGRG00000012396	Smndc1	100	76.471	Cricetulus_griseus_crigri
ENSATEG00000006830	smndc1	100	86.134	ENSCSEG00000015621	smndc1	100	86.134	Cynoglossus_semilaevis
ENSATEG00000006830	smndc1	100	89.916	ENSCVAG00000020432	smndc1	100	89.916	Cyprinodon_variegatus
ENSATEG00000006830	smndc1	100	85.356	ENSDARG00000056235	smndc1	100	85.356	Danio_rerio
ENSATEG00000006830	smndc1	100	76.050	ENSDNOG00000016387	SMNDC1	83	76.050	Dasypus_novemcinctus
ENSATEG00000006830	smndc1	100	76.050	ENSDORG00000023715	Smndc1	100	76.050	Dipodomys_ordii
ENSATEG00000006830	smndc1	95	40.964	FBgn0039977	CG17454	98	42.169	Drosophila_melanogaster
ENSATEG00000006830	smndc1	100	68.465	ENSEBUG00000010929	smndc1	100	70.124	Eptatretus_burgeri
ENSATEG00000006830	smndc1	100	76.050	ENSEASG00005014930	SMNDC1	100	76.050	Equus_asinus_asinus
ENSATEG00000006830	smndc1	100	76.050	ENSECAG00000029973	SMNDC1	100	76.050	Equus_caballus
ENSATEG00000006830	smndc1	83	54.545	ENSEEUG00000013407	-	100	54.545	Erinaceus_europaeus
ENSATEG00000006830	smndc1	100	84.034	ENSELUG00000000227	smndc1	100	84.034	Esox_lucius
ENSATEG00000006830	smndc1	100	76.050	ENSFCAG00000027353	SMNDC1	100	76.050	Felis_catus
ENSATEG00000006830	smndc1	100	77.311	ENSFALG00000002306	SMNDC1	100	77.311	Ficedula_albicollis
ENSATEG00000006830	smndc1	100	76.471	ENSFDAG00000006468	SMNDC1	100	76.471	Fukomys_damarensis
ENSATEG00000006830	smndc1	100	92.017	ENSFHEG00000020150	smndc1	100	92.017	Fundulus_heteroclitus
ENSATEG00000006830	smndc1	100	84.454	ENSGMOG00000016585	smndc1	100	84.454	Gadus_morhua
ENSATEG00000006830	smndc1	100	77.311	ENSGALG00000008561	SMNDC1	100	77.311	Gallus_gallus
ENSATEG00000006830	smndc1	100	91.176	ENSGAFG00000011582	smndc1	100	91.176	Gambusia_affinis
ENSATEG00000006830	smndc1	100	91.176	ENSGACG00000009468	smndc1	100	91.176	Gasterosteus_aculeatus
ENSATEG00000006830	smndc1	100	76.471	ENSGAGG00000024547	SMNDC1	100	76.471	Gopherus_agassizii
ENSATEG00000006830	smndc1	100	76.050	ENSGGOG00000010071	SMNDC1	100	76.050	Gorilla_gorilla
ENSATEG00000006830	smndc1	100	91.597	ENSHBUG00000017596	smndc1	100	91.597	Haplochromis_burtoni
ENSATEG00000006830	smndc1	100	76.471	ENSHGLG00000013390	-	100	76.471	Heterocephalus_glaber_female
ENSATEG00000006830	smndc1	100	55.738	ENSHGLG00000001157	-	100	55.328	Heterocephalus_glaber_female
ENSATEG00000006830	smndc1	100	76.471	ENSHGLG00100004814	-	100	76.471	Heterocephalus_glaber_male
ENSATEG00000006830	smndc1	100	61.066	ENSHGLG00100004278	-	100	59.350	Heterocephalus_glaber_male
ENSATEG00000006830	smndc1	100	84.937	ENSHCOG00000000783	smndc1	100	84.937	Hippocampus_comes
ENSATEG00000006830	smndc1	100	84.034	ENSIPUG00000004217	smndc1	100	84.034	Ictalurus_punctatus
ENSATEG00000006830	smndc1	100	76.050	ENSSTOG00000006088	SMNDC1	100	76.050	Ictidomys_tridecemlineatus
ENSATEG00000006830	smndc1	100	76.050	ENSJJAG00000019974	Smndc1	100	76.050	Jaculus_jaculus
ENSATEG00000006830	smndc1	100	89.076	ENSKMAG00000020134	smndc1	100	89.076	Kryptolebias_marmoratus
ENSATEG00000006830	smndc1	100	89.496	ENSLBEG00000004598	smndc1	100	89.496	Labrus_bergylta
ENSATEG00000006830	smndc1	100	76.050	ENSLACG00000007784	SMNDC1	100	76.050	Latimeria_chalumnae
ENSATEG00000006830	smndc1	100	82.353	ENSLOCG00000012355	smndc1	100	82.353	Lepisosteus_oculatus
ENSATEG00000006830	smndc1	100	75.630	ENSLAFG00000014353	SMNDC1	100	75.630	Loxodonta_africana
ENSATEG00000006830	smndc1	100	76.050	ENSMFAG00000002433	-	100	76.050	Macaca_fascicularis
ENSATEG00000006830	smndc1	100	63.866	ENSMFAG00000038381	-	100	63.866	Macaca_fascicularis
ENSATEG00000006830	smndc1	100	63.866	ENSMMUG00000045875	-	100	63.866	Macaca_mulatta
ENSATEG00000006830	smndc1	100	76.050	ENSMMUG00000007775	SMNDC1	100	76.050	Macaca_mulatta
ENSATEG00000006830	smndc1	100	76.050	ENSMNEG00000042963	-	100	76.050	Macaca_nemestrina
ENSATEG00000006830	smndc1	100	66.807	ENSMNEG00000033853	-	100	66.807	Macaca_nemestrina
ENSATEG00000006830	smndc1	100	71.130	ENSMLEG00000040236	SMNDC1	100	70.711	Mandrillus_leucophaeus
ENSATEG00000006830	smndc1	89	89.202	ENSMAMG00000018233	smndc1	87	89.202	Mastacembelus_armatus
ENSATEG00000006830	smndc1	100	91.597	ENSMZEG00005027510	smndc1	100	91.597	Maylandia_zebra
ENSATEG00000006830	smndc1	99	68.354	ENSMGAG00000010777	SMNDC1	99	68.354	Meleagris_gallopavo
ENSATEG00000006830	smndc1	100	76.050	ENSMAUG00000012243	-	100	76.050	Mesocricetus_auratus
ENSATEG00000006830	smndc1	99	60.759	ENSMAUG00000005459	-	93	62.869	Mesocricetus_auratus
ENSATEG00000006830	smndc1	100	75.630	ENSMICG00000027336	-	100	75.630	Microcebus_murinus
ENSATEG00000006830	smndc1	100	65.546	ENSMICG00000031640	-	100	65.546	Microcebus_murinus
ENSATEG00000006830	smndc1	100	75.630	ENSMOCG00000002458	Smndc1	100	75.630	Microtus_ochrogaster
ENSATEG00000006830	smndc1	100	89.076	ENSMMOG00000008856	smndc1	100	89.076	Mola_mola
ENSATEG00000006830	smndc1	100	76.471	ENSMODG00000010542	SMNDC1	100	76.471	Monodelphis_domestica
ENSATEG00000006830	smndc1	100	91.597	ENSMALG00000017598	smndc1	100	91.597	Monopterus_albus
ENSATEG00000006830	smndc1	100	76.050	MGP_CAROLIEiJ_G0023072	Smndc1	100	76.050	Mus_caroli
ENSATEG00000006830	smndc1	100	76.050	ENSMUSG00000025024	Smndc1	100	76.050	Mus_musculus
ENSATEG00000006830	smndc1	100	76.050	MGP_PahariEiJ_G0014560	Smndc1	100	76.050	Mus_pahari
ENSATEG00000006830	smndc1	100	76.050	MGP_SPRETEiJ_G0023993	Smndc1	100	76.050	Mus_spretus
ENSATEG00000006830	smndc1	100	76.050	ENSMPUG00000002089	SMNDC1	100	76.050	Mustela_putorius_furo
ENSATEG00000006830	smndc1	100	76.050	ENSMLUG00000016007	SMNDC1	100	76.050	Myotis_lucifugus
ENSATEG00000006830	smndc1	100	76.471	ENSNGAG00000006833	Smndc1	100	76.471	Nannospalax_galili
ENSATEG00000006830	smndc1	100	91.597	ENSNBRG00000017089	smndc1	100	91.597	Neolamprologus_brichardi
ENSATEG00000006830	smndc1	100	76.050	ENSNLEG00000015471	SMNDC1	100	76.050	Nomascus_leucogenys
ENSATEG00000006830	smndc1	70	59.036	ENSMEUG00000010120	-	98	54.040	Notamacropus_eugenii
ENSATEG00000006830	smndc1	100	76.050	ENSOPRG00000015348	SMNDC1	100	76.050	Ochotona_princeps
ENSATEG00000006830	smndc1	100	55.882	ENSODEG00000007594	-	100	53.782	Octodon_degus
ENSATEG00000006830	smndc1	100	91.597	ENSONIG00000000434	smndc1	100	91.597	Oreochromis_niloticus
ENSATEG00000006830	smndc1	100	76.891	ENSOANG00000001598	SMNDC1	100	76.891	Ornithorhynchus_anatinus
ENSATEG00000006830	smndc1	100	56.303	ENSOCUG00000012274	-	100	58.824	Oryctolagus_cuniculus
ENSATEG00000006830	smndc1	100	76.050	ENSOCUG00000008145	-	100	76.050	Oryctolagus_cuniculus
ENSATEG00000006830	smndc1	100	84.034	ENSORLG00000005934	smndc1	95	84.034	Oryzias_latipes
ENSATEG00000006830	smndc1	100	84.034	ENSORLG00020008796	smndc1	95	84.034	Oryzias_latipes_hni
ENSATEG00000006830	smndc1	100	84.034	ENSORLG00015013666	smndc1	100	84.034	Oryzias_latipes_hsok
ENSATEG00000006830	smndc1	100	82.353	ENSOMEG00000007590	smndc1	100	82.353	Oryzias_melastigma
ENSATEG00000006830	smndc1	100	77.824	ENSOGAG00000000571	SMNDC1	100	77.824	Otolemur_garnettii
ENSATEG00000006830	smndc1	100	77.824	ENSOARG00000009500	SMNDC1	100	77.824	Ovis_aries
ENSATEG00000006830	smndc1	100	76.050	ENSPPAG00000027815	SMNDC1	100	76.050	Pan_paniscus
ENSATEG00000006830	smndc1	100	76.050	ENSPPRG00000013749	SMNDC1	100	76.050	Panthera_pardus
ENSATEG00000006830	smndc1	100	76.050	ENSPTIG00000011451	SMNDC1	100	76.050	Panthera_tigris_altaica
ENSATEG00000006830	smndc1	100	76.050	ENSPTRG00000002937	SMNDC1	100	76.050	Pan_troglodytes
ENSATEG00000006830	smndc1	100	76.050	ENSPANG00000020805	-	100	76.050	Papio_anubis
ENSATEG00000006830	smndc1	100	71.849	ENSPANG00000031346	-	100	71.849	Papio_anubis
ENSATEG00000006830	smndc1	100	80.252	ENSPKIG00000017164	smndc1	100	80.252	Paramormyrops_kingsleyae
ENSATEG00000006830	smndc1	100	76.891	ENSPSIG00000012257	SMNDC1	100	76.891	Pelodiscus_sinensis
ENSATEG00000006830	smndc1	100	84.034	ENSPMGG00000015651	smndc1	100	84.034	Periophthalmus_magnuspinnatus
ENSATEG00000006830	smndc1	100	76.050	ENSPEMG00000022058	Smndc1	100	76.050	Peromyscus_maniculatus_bairdii
ENSATEG00000006830	smndc1	100	66.667	ENSPMAG00000007705	smndc1	100	66.667	Petromyzon_marinus
ENSATEG00000006830	smndc1	100	76.471	ENSPCIG00000018419	SMNDC1	100	76.471	Phascolarctos_cinereus
ENSATEG00000006830	smndc1	95	58.407	ENSPCIG00000009693	-	98	58.407	Phascolarctos_cinereus
ENSATEG00000006830	smndc1	100	90.756	ENSPFOG00000017113	smndc1	100	90.756	Poecilia_formosa
ENSATEG00000006830	smndc1	100	90.756	ENSPLAG00000010372	smndc1	100	90.756	Poecilia_latipinna
ENSATEG00000006830	smndc1	100	90.756	ENSPMEG00000012288	smndc1	100	90.756	Poecilia_mexicana
ENSATEG00000006830	smndc1	100	89.916	ENSPREG00000012279	smndc1	100	89.916	Poecilia_reticulata
ENSATEG00000006830	smndc1	100	76.050	ENSPPYG00000002643	SMNDC1	100	76.050	Pongo_abelii
ENSATEG00000006830	smndc1	81	72.021	ENSPCAG00000016183	SMNDC1	100	72.021	Procavia_capensis
ENSATEG00000006830	smndc1	100	75.630	ENSPCOG00000024343	SMNDC1	100	75.630	Propithecus_coquereli
ENSATEG00000006830	smndc1	100	60.504	ENSPVAG00000004368	SMNDC1	100	60.504	Pteropus_vampyrus
ENSATEG00000006830	smndc1	83	90.404	ENSPNYG00000024093	smndc1	86	90.404	Pundamilia_nyererei
ENSATEG00000006830	smndc1	100	81.513	ENSPNAG00000025285	smndc1	100	81.513	Pygocentrus_nattereri
ENSATEG00000006830	smndc1	100	76.050	ENSRNOG00000014833	Smndc1	100	76.050	Rattus_norvegicus
ENSATEG00000006830	smndc1	100	75.630	ENSRBIG00000000224	-	100	75.630	Rhinopithecus_bieti
ENSATEG00000006830	smndc1	100	62.185	ENSRBIG00000032452	-	100	62.185	Rhinopithecus_bieti
ENSATEG00000006830	smndc1	100	62.605	ENSRROG00000039125	-	100	62.605	Rhinopithecus_roxellana
ENSATEG00000006830	smndc1	100	76.050	ENSRROG00000044992	-	100	76.050	Rhinopithecus_roxellana
ENSATEG00000006830	smndc1	100	76.050	ENSSBOG00000026789	SMNDC1	100	76.050	Saimiri_boliviensis_boliviensis
ENSATEG00000006830	smndc1	100	76.471	ENSSHAG00000015189	SMNDC1	100	76.471	Sarcophilus_harrisii
ENSATEG00000006830	smndc1	100	80.252	ENSSFOG00015008311	smndc1	100	80.252	Scleropages_formosus
ENSATEG00000006830	smndc1	100	91.597	ENSSMAG00000020118	smndc1	100	91.597	Scophthalmus_maximus
ENSATEG00000006830	smndc1	100	93.697	ENSSDUG00000015330	smndc1	100	93.697	Seriola_dumerili
ENSATEG00000006830	smndc1	100	93.697	ENSSLDG00000017325	smndc1	100	93.697	Seriola_lalandi_dorsalis
ENSATEG00000006830	smndc1	100	76.050	ENSSARG00000006063	SMNDC1	100	76.050	Sorex_araneus
ENSATEG00000006830	smndc1	100	76.891	ENSSPUG00000004574	SMNDC1	100	76.891	Sphenodon_punctatus
ENSATEG00000006830	smndc1	100	91.176	ENSSPAG00000000338	smndc1	100	91.176	Stegastes_partitus
ENSATEG00000006830	smndc1	100	76.050	ENSSSCG00000030507	SMNDC1	100	76.050	Sus_scrofa
ENSATEG00000006830	smndc1	100	77.311	ENSTGUG00000010599	SMNDC1	100	77.311	Taeniopygia_guttata
ENSATEG00000006830	smndc1	100	85.714	ENSTRUG00000023281	smndc1	100	85.714	Takifugu_rubripes
ENSATEG00000006830	smndc1	100	86.134	ENSTNIG00000013331	smndc1	100	86.134	Tetraodon_nigroviridis
ENSATEG00000006830	smndc1	100	76.050	ENSTBEG00000014337	SMNDC1	100	76.050	Tupaia_belangeri
ENSATEG00000006830	smndc1	100	76.050	ENSUAMG00000008142	SMNDC1	100	76.050	Ursus_americanus
ENSATEG00000006830	smndc1	100	76.050	ENSUMAG00000023722	SMNDC1	100	76.050	Ursus_maritimus
ENSATEG00000006830	smndc1	83	75.253	ENSVPAG00000003402	SMNDC1	100	75.253	Vicugna_pacos
ENSATEG00000006830	smndc1	100	76.050	ENSVVUG00000007820	SMNDC1	100	76.050	Vulpes_vulpes
ENSATEG00000006830	smndc1	60	62.676	ENSXETG00000015415	SMNDC1	100	62.676	Xenopus_tropicalis
ENSATEG00000006830	smndc1	100	92.017	ENSXCOG00000009159	smndc1	100	92.017	Xiphophorus_couchianus
ENSATEG00000006830	smndc1	100	92.017	ENSXMAG00000012755	smndc1	100	92.017	Xiphophorus_maculatus