EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000006931 (Gene tree)
Gene ID: 113171671
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 13982 bases
Position: chrOOHO01000003.1:3470296-3484277
Accession: 113171671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000009956	EST1	PF10374.9	2.1e-26	1	1
ENSATEP00000009940	EST1	PF10374.9	2.2e-26	1	1
ENSATEP00000009976	EST1	PF10374.9	2.2e-26	1	1
ENSATEP00000009956	EST1_DNA_bind	PF10373.9	2.4e-48	1	1
ENSATEP00000009940	EST1_DNA_bind	PF10373.9	2.5e-48	1	1
ENSATEP00000009976	EST1_DNA_bind	PF10373.9	1.6e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000010152	-	3297	-	ENSATEP00000009976	1098 (aa)	-	-
ENSATET00000010116	-	6014	XM_026374208	ENSATEP00000009940	1159 (aa)	XP_026229993	UPI000E45CB36
ENSATET00000010132	-	5969	XM_026374210	ENSATEP00000009956	1144 (aa)	XP_026229995	-

Gene Model

Click here to download ENSATEG00000006931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000006931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000006931	smg7	99	66.299	ENSG00000116698	SMG7	86	94.340	Homo_sapiens
ENSATEG00000006931	smg7	100	83.900	ENSAPOG00000009611	smg7	96	94.196	Acanthochromis_polyacanthus
ENSATEG00000006931	smg7	99	65.158	ENSAMEG00000002357	SMG7	99	65.017	Ailuropoda_melanoleuca
ENSATEG00000006931	smg7	97	85.727	ENSACIG00000015152	smg7	100	86.176	Amphilophus_citrinellus
ENSATEG00000006931	smg7	95	96.127	ENSAOCG00000013538	smg7	100	93.328	Amphiprion_ocellaris
ENSATEG00000006931	smg7	63	95.851	ENSAPEG00000007851	smg7	100	92.814	Amphiprion_percula
ENSATEG00000006931	smg7	99	65.564	ENSAPLG00000015811	SMG7	99	65.055	Anas_platyrhynchos
ENSATEG00000006931	smg7	99	62.774	ENSACAG00000014989	SMG7	99	63.068	Anolis_carolinensis
ENSATEG00000006931	smg7	99	65.957	ENSANAG00000028114	SMG7	90	90.303	Aotus_nancymaae
ENSATEG00000006931	smg7	100	89.140	ENSACLG00000022079	smg7	100	89.140	Astatotilapia_calliptera
ENSATEG00000006931	smg7	100	76.293	ENSAMXG00000020809	smg7	100	76.577	Astyanax_mexicanus
ENSATEG00000006931	smg7	99	65.789	ENSBTAG00000008003	SMG7	99	65.620	Bos_taurus
ENSATEG00000006931	smg7	99	66.043	ENSCJAG00000005135	SMG7	89	91.975	Callithrix_jacchus
ENSATEG00000006931	smg7	99	62.111	ENSCAFG00000013276	SMG7	97	61.311	Canis_familiaris
ENSATEG00000006931	smg7	99	65.228	ENSCAFG00020015475	SMG7	89	90.244	Canis_lupus_dingo
ENSATEG00000006931	smg7	100	62.623	ENSCHIG00000018192	SMG7	99	62.010	Capra_hircus
ENSATEG00000006931	smg7	99	66.129	ENSTSYG00000002667	SMG7	80	94.231	Carlito_syrichta
ENSATEG00000006931	smg7	99	62.520	ENSCPOG00000008906	SMG7	99	61.120	Cavia_porcellus
ENSATEG00000006931	smg7	99	66.128	ENSCCAG00000028596	SMG7	86	93.082	Cebus_capucinus
ENSATEG00000006931	smg7	99	66.384	ENSCATG00000011063	SMG7	86	93.082	Cercocebus_atys
ENSATEG00000006931	smg7	99	66.469	ENSCLAG00000010751	SMG7	99	65.874	Chinchilla_lanigera
ENSATEG00000006931	smg7	99	62.960	ENSCSAG00000012654	SMG7	97	62.469	Chlorocebus_sabaeus
ENSATEG00000006931	smg7	89	62.921	ENSCHOG00000010522	SMG7	88	62.921	Choloepus_hoffmanni
ENSATEG00000006931	smg7	99	67.119	ENSCPBG00000015724	SMG7	99	66.610	Chrysemys_picta_bellii
ENSATEG00000006931	smg7	99	66.269	ENSCANG00000015680	SMG7	86	93.082	Colobus_angolensis_palliatus
ENSATEG00000006931	smg7	99	65.649	ENSCGRG00001013705	Smg7	99	65.140	Cricetulus_griseus_chok1gshd
ENSATEG00000006931	smg7	99	65.503	ENSCGRG00000018401	Smg7	100	64.991	Cricetulus_griseus_crigri
ENSATEG00000006931	smg7	99	83.682	ENSCVAG00000011842	smg7	100	83.595	Cyprinodon_variegatus
ENSATEG00000006931	smg7	100	74.835	ENSDARG00000060767	smg7	100	77.148	Danio_rerio
ENSATEG00000006931	smg7	99	62.869	ENSDORG00000007331	Smg7	99	62.131	Dipodomys_ordii
ENSATEG00000006931	smg7	96	62.130	ENSETEG00000002654	SMG7	99	61.538	Echinops_telfairi
ENSATEG00000006931	smg7	99	63.361	ENSEASG00005006524	SMG7	99	62.787	Equus_asinus_asinus
ENSATEG00000006931	smg7	99	65.106	ENSECAG00000004313	SMG7	99	62.869	Equus_caballus
ENSATEG00000006931	smg7	96	61.695	ENSEEUG00000002024	SMG7	94	61.318	Erinaceus_europaeus
ENSATEG00000006931	smg7	100	76.495	ENSELUG00000010293	smg7	99	77.778	Esox_lucius
ENSATEG00000006931	smg7	99	64.048	ENSFCAG00000010900	SMG7	99	63.527	Felis_catus
ENSATEG00000006931	smg7	99	61.653	ENSFALG00000003047	SMG7	100	61.360	Ficedula_albicollis
ENSATEG00000006931	smg7	99	62.859	ENSFDAG00000012121	SMG7	99	62.023	Fukomys_damarensis
ENSATEG00000006931	smg7	100	84.183	ENSFHEG00000011073	smg7	100	83.405	Fundulus_heteroclitus
ENSATEG00000006931	smg7	85	79.623	ENSGMOG00000004916	smg7	91	81.391	Gadus_morhua
ENSATEG00000006931	smg7	99	65.590	ENSGALG00000004667	SMG7	99	65.511	Gallus_gallus
ENSATEG00000006931	smg7	100	82.785	ENSGAFG00000019000	smg7	100	82.526	Gambusia_affinis
ENSATEG00000006931	smg7	97	84.431	ENSGACG00000001634	smg7	99	84.164	Gasterosteus_aculeatus
ENSATEG00000006931	smg7	99	66.384	ENSGGOG00000002342	SMG7	83	91.975	Gorilla_gorilla
ENSATEG00000006931	smg7	100	86.928	ENSHBUG00000003726	smg7	99	88.277	Haplochromis_burtoni
ENSATEG00000006931	smg7	99	66.469	ENSHGLG00000009353	SMG7	99	65.959	Heterocephalus_glaber_female
ENSATEG00000006931	smg7	99	66.384	ENSHGLG00100009637	-	99	65.874	Heterocephalus_glaber_male
ENSATEG00000006931	smg7	99	57.377	ENSHGLG00100004878	-	99	56.967	Heterocephalus_glaber_male
ENSATEG00000006931	smg7	100	76.849	ENSIPUG00000016997	smg7	100	76.170	Ictalurus_punctatus
ENSATEG00000006931	smg7	99	64.932	ENSSTOG00000000401	SMG7	99	64.505	Ictidomys_tridecemlineatus
ENSATEG00000006931	smg7	99	63.033	ENSJJAG00000012351	Smg7	99	62.459	Jaculus_jaculus
ENSATEG00000006931	smg7	97	82.012	ENSKMAG00000004900	smg7	100	81.656	Kryptolebias_marmoratus
ENSATEG00000006931	smg7	99	89.791	ENSLBEG00000002983	smg7	99	89.616	Labrus_bergylta
ENSATEG00000006931	smg7	52	79.698	ENSLBEG00000005220	-	75	79.698	Labrus_bergylta
ENSATEG00000006931	smg7	99	67.373	ENSLACG00000000972	SMG7	99	67.345	Latimeria_chalumnae
ENSATEG00000006931	smg7	99	68.408	ENSLOCG00000002010	smg7	99	68.460	Lepisosteus_oculatus
ENSATEG00000006931	smg7	99	62.747	ENSLAFG00000008186	SMG7	99	62.171	Loxodonta_africana
ENSATEG00000006931	smg7	99	64.851	ENSMFAG00000031653	SMG7	86	93.082	Macaca_fascicularis
ENSATEG00000006931	smg7	99	65.447	ENSMMUG00000018458	SMG7	99	64.936	Macaca_mulatta
ENSATEG00000006931	smg7	99	66.384	ENSMNEG00000034798	SMG7	86	93.082	Macaca_nemestrina
ENSATEG00000006931	smg7	99	66.384	ENSMLEG00000037170	SMG7	99	65.874	Mandrillus_leucophaeus
ENSATEG00000006931	smg7	88	90.594	ENSMAMG00000018733	smg7	85	90.891	Mastacembelus_armatus
ENSATEG00000006931	smg7	100	89.487	ENSMZEG00005015247	smg7	100	89.053	Maylandia_zebra
ENSATEG00000006931	smg7	99	65.210	ENSMGAG00000001561	SMG7	99	64.962	Meleagris_gallopavo
ENSATEG00000006931	smg7	99	65.394	ENSMAUG00000019484	Smg7	99	64.885	Mesocricetus_auratus
ENSATEG00000006931	smg7	99	66.299	ENSMICG00000007145	SMG7	82	94.268	Microcebus_murinus
ENSATEG00000006931	smg7	99	64.941	ENSMOCG00000020748	Smg7	99	64.431	Microtus_ochrogaster
ENSATEG00000006931	smg7	99	84.856	ENSMMOG00000001524	smg7	99	84.435	Mola_mola
ENSATEG00000006931	smg7	92	65.150	ENSMODG00000007139	SMG7	99	65.353	Monodelphis_domestica
ENSATEG00000006931	smg7	100	84.188	ENSMALG00000000061	smg7	93	90.278	Monopterus_albus
ENSATEG00000006931	smg7	99	65.561	MGP_CAROLIEiJ_G0014704	Smg7	99	65.306	Mus_caroli
ENSATEG00000006931	smg7	99	65.280	ENSMUSG00000042772	Smg7	99	65.025	Mus_musculus
ENSATEG00000006931	smg7	99	65.620	MGP_PahariEiJ_G0027940	Smg7	99	65.110	Mus_pahari
ENSATEG00000006931	smg7	99	65.365	MGP_SPRETEiJ_G0015511	Smg7	99	65.110	Mus_spretus
ENSATEG00000006931	smg7	98	61.481	ENSMPUG00000011732	SMG7	97	61.513	Mustela_putorius_furo
ENSATEG00000006931	smg7	99	62.407	ENSMLUG00000015417	SMG7	99	62.120	Myotis_lucifugus
ENSATEG00000006931	smg7	100	65.596	ENSNGAG00000009836	Smg7	100	64.492	Nannospalax_galili
ENSATEG00000006931	smg7	98	83.156	ENSNBRG00000024343	smg7	99	83.333	Neolamprologus_brichardi
ENSATEG00000006931	smg7	99	66.384	ENSNLEG00000018018	SMG7	99	65.874	Nomascus_leucogenys
ENSATEG00000006931	smg7	70	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSATEG00000006931	smg7	96	57.804	ENSOPRG00000013942	SMG7	96	57.167	Ochotona_princeps
ENSATEG00000006931	smg7	99	66.214	ENSODEG00000010390	SMG7	99	65.705	Octodon_degus
ENSATEG00000006931	smg7	100	89.757	ENSONIG00000000277	smg7	100	89.757	Oreochromis_niloticus
ENSATEG00000006931	smg7	99	61.653	ENSOANG00000000994	SMG7	100	61.806	Ornithorhynchus_anatinus
ENSATEG00000006931	smg7	99	60.758	ENSOCUG00000005887	SMG7	93	59.754	Oryctolagus_cuniculus
ENSATEG00000006931	smg7	100	80.139	ENSORLG00000007314	smg7	100	80.575	Oryzias_latipes
ENSATEG00000006931	smg7	100	80.662	ENSORLG00020015779	smg7	100	81.098	Oryzias_latipes_hni
ENSATEG00000006931	smg7	100	81.272	ENSORLG00015012289	smg7	100	81.010	Oryzias_latipes_hsok
ENSATEG00000006931	smg7	100	78.381	ENSOMEG00000002328	smg7	100	78.214	Oryzias_melastigma
ENSATEG00000006931	smg7	96	61.558	ENSOGAG00000003107	SMG7	93	61.069	Otolemur_garnettii
ENSATEG00000006931	smg7	99	64.848	ENSOARG00000001352	SMG7	100	64.193	Ovis_aries
ENSATEG00000006931	smg7	99	66.384	ENSPPAG00000031619	SMG7	90	90.303	Pan_paniscus
ENSATEG00000006931	smg7	99	65.673	ENSPPRG00000011222	SMG7	99	65.447	Panthera_pardus
ENSATEG00000006931	smg7	96	62.616	ENSPTIG00000007242	SMG7	100	62.395	Panthera_tigris_altaica
ENSATEG00000006931	smg7	99	66.384	ENSPTRG00000001764	SMG7	86	93.082	Pan_troglodytes
ENSATEG00000006931	smg7	99	66.384	ENSPANG00000004520	SMG7	99	65.874	Papio_anubis
ENSATEG00000006931	smg7	100	68.512	ENSPKIG00000007242	smg7	100	68.760	Paramormyrops_kingsleyae
ENSATEG00000006931	smg7	99	65.702	ENSPSIG00000012201	SMG7	100	65.352	Pelodiscus_sinensis
ENSATEG00000006931	smg7	72	48.894	ENSPMGG00000021833	smg7	97	49.643	Periophthalmus_magnuspinnatus
ENSATEG00000006931	smg7	99	64.812	ENSPEMG00000011315	Smg7	99	64.469	Peromyscus_maniculatus_bairdii
ENSATEG00000006931	smg7	99	66.553	ENSPCIG00000003786	SMG7	89	93.750	Phascolarctos_cinereus
ENSATEG00000006931	smg7	100	81.728	ENSPFOG00000019219	smg7	100	81.645	Poecilia_formosa
ENSATEG00000006931	smg7	100	84.069	ENSPLAG00000001446	smg7	100	83.983	Poecilia_latipinna
ENSATEG00000006931	smg7	97	83.631	ENSPMEG00000005218	smg7	99	83.542	Poecilia_mexicana
ENSATEG00000006931	smg7	87	78.671	ENSPREG00000019039	smg7	91	79.266	Poecilia_reticulata
ENSATEG00000006931	smg7	99	66.384	ENSPPYG00000000427	SMG7	99	65.874	Pongo_abelii
ENSATEG00000006931	smg7	83	72.149	ENSPCAG00000008360	SMG7	86	72.149	Procavia_capensis
ENSATEG00000006931	smg7	99	65.188	ENSPCOG00000011996	SMG7	77	94.268	Propithecus_coquereli
ENSATEG00000006931	smg7	91	58.781	ENSPVAG00000000851	SMG7	89	58.550	Pteropus_vampyrus
ENSATEG00000006931	smg7	100	89.382	ENSPNYG00000007643	smg7	100	89.295	Pundamilia_nyererei
ENSATEG00000006931	smg7	100	77.634	ENSPNAG00000011374	smg7	100	76.712	Pygocentrus_nattereri
ENSATEG00000006931	smg7	99	65.988	ENSRNOG00000027962	Smg7	99	65.625	Rattus_norvegicus
ENSATEG00000006931	smg7	99	66.384	ENSRBIG00000036316	SMG7	99	65.874	Rhinopithecus_bieti
ENSATEG00000006931	smg7	99	66.384	ENSRROG00000035719	SMG7	99	65.874	Rhinopithecus_roxellana
ENSATEG00000006931	smg7	99	64.756	ENSSBOG00000023454	SMG7	86	94.340	Saimiri_boliviensis_boliviensis
ENSATEG00000006931	smg7	99	66.128	ENSSHAG00000013147	SMG7	99	65.845	Sarcophilus_harrisii
ENSATEG00000006931	smg7	100	73.947	ENSSFOG00015017252	smg7	100	73.454	Scleropages_formosus
ENSATEG00000006931	smg7	100	85.838	ENSSMAG00000006067	smg7	100	86.458	Scophthalmus_maximus
ENSATEG00000006931	smg7	100	94.276	ENSSDUG00000017543	smg7	100	94.363	Seriola_dumerili
ENSATEG00000006931	smg7	99	65.654	ENSSPUG00000002064	SMG7	99	65.085	Sphenodon_punctatus
ENSATEG00000006931	smg7	99	87.251	ENSSPAG00000008733	smg7	99	88.031	Stegastes_partitus
ENSATEG00000006931	smg7	99	65.068	ENSSSCG00000015558	SMG7	99	64.761	Sus_scrofa
ENSATEG00000006931	smg7	99	65.841	ENSTGUG00000003928	SMG7	100	65.336	Taeniopygia_guttata
ENSATEG00000006931	smg7	100	72.586	ENSTNIG00000002802	smg7	100	71.499	Tetraodon_nigroviridis
ENSATEG00000006931	smg7	78	68.000	ENSTBEG00000003220	SMG7	72	68.000	Tupaia_belangeri
ENSATEG00000006931	smg7	96	61.872	ENSTTRG00000014778	SMG7	94	61.662	Tursiops_truncatus
ENSATEG00000006931	smg7	96	63.218	ENSUAMG00000017473	SMG7	100	62.986	Ursus_americanus
ENSATEG00000006931	smg7	96	63.218	ENSUMAG00000016389	SMG7	100	62.986	Ursus_maritimus
ENSATEG00000006931	smg7	99	64.041	ENSVVUG00000008976	SMG7	99	63.815	Vulpes_vulpes
ENSATEG00000006931	smg7	99	59.815	ENSXETG00000012528	smg7	100	59.122	Xenopus_tropicalis
ENSATEG00000006931	smg7	100	83.550	ENSXMAG00000007123	smg7	100	82.657	Xiphophorus_maculatus