EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000007010 (Gene tree)
Gene ID: 113152741
Gene Symbol: cpsf4
Alias: nar|no arches
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 5127 bases
Position: chrOOHO01000019.1:18848685-18853811
Accession: 113152741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000010006	zf-CCCH	PF00642.24	1.5e-20	1	2
ENSATEP00000010006	zf-CCCH	PF00642.24	1.5e-20	2	2
ENSATEP00000009989	zf-CCCH	PF00642.24	2.4e-20	1	2
ENSATEP00000009989	zf-CCCH	PF00642.24	2.4e-20	2	2
ENSATEP00000010006	zf-CCHC	PF00098.23	4.4e-06	1	1
ENSATEP00000009989	zf-CCHC	PF00098.23	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000010165	-	2828	-	ENSATEP00000009989	267 (aa)	XP_026201949	UPI000E461D80
ENSATET00000010182	-	744	-	ENSATEP00000010006	247 (aa)	-	-

Gene Model

Click here to download ENSATEG00000007010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000007010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000007010	cpsf4	100	85.425	ENSG00000160917	CPSF4	100	98.214	Homo_sapiens
ENSATEG00000007010	cpsf4	67	87.709	ENSAPOG00000004921	cpsf4	100	87.709	Acanthochromis_polyacanthus
ENSATEG00000007010	cpsf4	100	84.559	ENSAMEG00000006252	CPSF4	100	84.559	Ailuropoda_melanoleuca
ENSATEG00000007010	cpsf4	100	90.688	ENSACIG00000009248	cpsf4	100	92.308	Amphilophus_citrinellus
ENSATEG00000007010	cpsf4	100	94.007	ENSAOCG00000019616	cpsf4	100	94.007	Amphiprion_ocellaris
ENSATEG00000007010	cpsf4	100	94.007	ENSAPEG00000011679	cpsf4	100	94.007	Amphiprion_percula
ENSATEG00000007010	cpsf4	100	82.721	ENSACAG00000012941	CPSF4	89	82.721	Anolis_carolinensis
ENSATEG00000007010	cpsf4	100	84.191	ENSANAG00000021360	CPSF4	100	84.191	Aotus_nancymaae
ENSATEG00000007010	cpsf4	100	94.007	ENSACLG00000010374	cpsf4	100	94.007	Astatotilapia_calliptera
ENSATEG00000007010	cpsf4	100	84.815	ENSAMXG00000031647	cpsf4	100	84.815	Astyanax_mexicanus
ENSATEG00000007010	cpsf4	100	85.020	ENSBTAG00000002090	CPSF4	100	84.739	Bos_taurus
ENSATEG00000007010	cpsf4	100	84.191	ENSCJAG00000015826	CPSF4	100	84.191	Callithrix_jacchus
ENSATEG00000007010	cpsf4	100	84.559	ENSCAFG00000015036	CPSF4	99	87.425	Canis_familiaris
ENSATEG00000007010	cpsf4	100	79.779	ENSCAFG00020014462	CPSF4	100	79.779	Canis_lupus_dingo
ENSATEG00000007010	cpsf4	100	84.191	ENSCHIG00000014313	CPSF4	100	84.191	Capra_hircus
ENSATEG00000007010	cpsf4	100	77.016	ENSTSYG00000014604	-	100	77.016	Carlito_syrichta
ENSATEG00000007010	cpsf4	100	85.020	ENSTSYG00000005712	-	100	84.615	Carlito_syrichta
ENSATEG00000007010	cpsf4	88	79.452	ENSTSYG00000008195	-	99	79.386	Carlito_syrichta
ENSATEG00000007010	cpsf4	82	83.408	ENSCAPG00000013881	CPSF4	88	82.667	Cavia_aperea
ENSATEG00000007010	cpsf4	100	85.425	ENSCPOG00000001783	CPSF4	100	85.200	Cavia_porcellus
ENSATEG00000007010	cpsf4	100	84.191	ENSCCAG00000028291	CPSF4	100	84.191	Cebus_capucinus
ENSATEG00000007010	cpsf4	100	84.191	ENSCATG00000038440	CPSF4	100	84.191	Cercocebus_atys
ENSATEG00000007010	cpsf4	100	84.191	ENSCLAG00000007050	CPSF4	100	84.191	Chinchilla_lanigera
ENSATEG00000007010	cpsf4	100	84.191	ENSCSAG00000017795	CPSF4	100	84.191	Chlorocebus_sabaeus
ENSATEG00000007010	cpsf4	80	80.365	ENSCPBG00000020869	CPSF4	100	83.105	Chrysemys_picta_bellii
ENSATEG00000007010	cpsf4	67	77.711	ENSCPBG00000010269	-	100	77.711	Chrysemys_picta_bellii
ENSATEG00000007010	cpsf4	97	54.651	ENSCING00000021080	-	97	56.107	Ciona_intestinalis
ENSATEG00000007010	cpsf4	96	53.710	ENSCSAVG00000011469	-	97	53.710	Ciona_savignyi
ENSATEG00000007010	cpsf4	100	84.191	ENSCANG00000019384	CPSF4	100	84.191	Colobus_angolensis_palliatus
ENSATEG00000007010	cpsf4	100	85.425	ENSCGRG00001024184	Cpsf4	100	85.200	Cricetulus_griseus_chok1gshd
ENSATEG00000007010	cpsf4	100	84.559	ENSCGRG00000013892	Cpsf4	100	84.559	Cricetulus_griseus_crigri
ENSATEG00000007010	cpsf4	100	92.509	ENSCSEG00000019055	cpsf4	100	92.509	Cynoglossus_semilaevis
ENSATEG00000007010	cpsf4	100	90.262	ENSCVAG00000016528	cpsf4	100	90.262	Cyprinodon_variegatus
ENSATEG00000007010	cpsf4	100	84.133	ENSDARG00000020217	cpsf4	100	84.133	Danio_rerio
ENSATEG00000007010	cpsf4	100	84.559	ENSDNOG00000006344	CPSF4	100	84.559	Dasypus_novemcinctus
ENSATEG00000007010	cpsf4	81	83.636	ENSDORG00000000742	Cpsf4	100	83.636	Dipodomys_ordii
ENSATEG00000007010	cpsf4	100	54.181	FBgn0015621	Clp	99	54.515	Drosophila_melanogaster
ENSATEG00000007010	cpsf4	76	95.455	ENSETEG00000002608	CPSF4	70	95.455	Echinops_telfairi
ENSATEG00000007010	cpsf4	99	70.204	ENSEBUG00000012552	cpsf4	98	70.204	Eptatretus_burgeri
ENSATEG00000007010	cpsf4	100	85.425	ENSEASG00005002487	CPSF4	100	85.200	Equus_asinus_asinus
ENSATEG00000007010	cpsf4	100	84.559	ENSECAG00000007525	CPSF4	100	84.559	Equus_caballus
ENSATEG00000007010	cpsf4	63	94.030	ENSEEUG00000002158	CPSF4	73	94.030	Erinaceus_europaeus
ENSATEG00000007010	cpsf4	100	86.397	ENSELUG00000011481	cpsf4	100	86.765	Esox_lucius
ENSATEG00000007010	cpsf4	100	84.559	ENSFCAG00000015070	CPSF4	100	84.559	Felis_catus
ENSATEG00000007010	cpsf4	100	84.211	ENSFALG00000013799	CPSF4	100	84.211	Ficedula_albicollis
ENSATEG00000007010	cpsf4	67	56.395	ENSFALG00000012906	-	100	56.395	Ficedula_albicollis
ENSATEG00000007010	cpsf4	90	83.333	ENSFDAG00000014092	CPSF4	100	83.333	Fukomys_damarensis
ENSATEG00000007010	cpsf4	100	92.509	ENSFHEG00000010880	cpsf4	100	92.509	Fundulus_heteroclitus
ENSATEG00000007010	cpsf4	100	86.260	ENSGMOG00000002330	cpsf4	100	86.260	Gadus_morhua
ENSATEG00000007010	cpsf4	100	84.615	ENSGALG00000004714	CPSF4	100	84.615	Gallus_gallus
ENSATEG00000007010	cpsf4	99	37.368	ENSGALG00000004441	-	98	37.368	Gallus_gallus
ENSATEG00000007010	cpsf4	100	90.262	ENSGAFG00000010580	cpsf4	100	90.262	Gambusia_affinis
ENSATEG00000007010	cpsf4	100	88.627	ENSGACG00000007792	cpsf4	100	88.627	Gasterosteus_aculeatus
ENSATEG00000007010	cpsf4	74	74.725	ENSGAGG00000020579	-	100	74.725	Gopherus_agassizii
ENSATEG00000007010	cpsf4	100	83.824	ENSGAGG00000021835	CPSF4	100	83.824	Gopherus_agassizii
ENSATEG00000007010	cpsf4	100	84.191	ENSGGOG00000015131	CPSF4	100	84.191	Gorilla_gorilla
ENSATEG00000007010	cpsf4	100	94.007	ENSHBUG00000013699	cpsf4	100	94.007	Haplochromis_burtoni
ENSATEG00000007010	cpsf4	100	83.883	ENSHGLG00000017150	CPSF4	100	83.883	Heterocephalus_glaber_female
ENSATEG00000007010	cpsf4	87	81.092	ENSHGLG00100009215	-	100	81.092	Heterocephalus_glaber_male
ENSATEG00000007010	cpsf4	100	54.656	ENSHGLG00100017302	-	100	55.870	Heterocephalus_glaber_male
ENSATEG00000007010	cpsf4	100	89.139	ENSHCOG00000004397	cpsf4	100	89.139	Hippocampus_comes
ENSATEG00000007010	cpsf4	100	83.026	ENSIPUG00000017147	cpsf4	100	84.133	Ictalurus_punctatus
ENSATEG00000007010	cpsf4	100	85.425	ENSSTOG00000001688	CPSF4	100	84.800	Ictidomys_tridecemlineatus
ENSATEG00000007010	cpsf4	100	84.191	ENSJJAG00000019426	Cpsf4	100	84.191	Jaculus_jaculus
ENSATEG00000007010	cpsf4	100	90.637	ENSKMAG00000015642	cpsf4	100	90.637	Kryptolebias_marmoratus
ENSATEG00000007010	cpsf4	100	83.395	ENSLACG00000010938	CPSF4	100	83.395	Latimeria_chalumnae
ENSATEG00000007010	cpsf4	100	61.508	ENSLACG00000018470	-	100	61.508	Latimeria_chalumnae
ENSATEG00000007010	cpsf4	100	81.852	ENSLOCG00000004814	cpsf4	100	82.900	Lepisosteus_oculatus
ENSATEG00000007010	cpsf4	100	84.926	ENSLAFG00000000159	CPSF4	100	84.926	Loxodonta_africana
ENSATEG00000007010	cpsf4	100	84.191	ENSMFAG00000001462	CPSF4	100	84.536	Macaca_fascicularis
ENSATEG00000007010	cpsf4	100	84.191	ENSMMUG00000019191	CPSF4	100	84.191	Macaca_mulatta
ENSATEG00000007010	cpsf4	100	84.191	ENSMNEG00000032306	CPSF4	100	84.191	Macaca_nemestrina
ENSATEG00000007010	cpsf4	100	84.191	ENSMLEG00000034721	CPSF4	100	84.191	Mandrillus_leucophaeus
ENSATEG00000007010	cpsf4	100	94.757	ENSMAMG00000006244	cpsf4	100	94.757	Mastacembelus_armatus
ENSATEG00000007010	cpsf4	100	94.007	ENSMZEG00005007515	cpsf4	100	94.007	Maylandia_zebra
ENSATEG00000007010	cpsf4	86	84.038	ENSMGAG00000004235	CPSF4	100	84.038	Meleagris_gallopavo
ENSATEG00000007010	cpsf4	100	84.559	ENSMAUG00000021253	Cpsf4	100	84.559	Mesocricetus_auratus
ENSATEG00000007010	cpsf4	100	83.883	ENSMICG00000017429	CPSF4	100	84.191	Microcebus_murinus
ENSATEG00000007010	cpsf4	100	84.559	ENSMOCG00000014901	Cpsf4	100	84.559	Microtus_ochrogaster
ENSATEG00000007010	cpsf4	100	93.258	ENSMMOG00000001813	cpsf4	100	93.258	Mola_mola
ENSATEG00000007010	cpsf4	100	84.559	ENSMODG00000001367	CPSF4	100	84.559	Monodelphis_domestica
ENSATEG00000007010	cpsf4	100	93.633	ENSMALG00000012611	cpsf4	100	93.633	Monopterus_albus
ENSATEG00000007010	cpsf4	100	85.425	MGP_CAROLIEiJ_G0028012	Cpsf4	100	85.200	Mus_caroli
ENSATEG00000007010	cpsf4	100	85.425	ENSMUSG00000029625	Cpsf4	100	85.200	Mus_musculus
ENSATEG00000007010	cpsf4	100	85.425	MGP_PahariEiJ_G0024581	Cpsf4	100	85.200	Mus_pahari
ENSATEG00000007010	cpsf4	100	85.425	MGP_SPRETEiJ_G0029013	Cpsf4	100	85.200	Mus_spretus
ENSATEG00000007010	cpsf4	100	84.559	ENSMPUG00000016508	CPSF4	100	84.559	Mustela_putorius_furo
ENSATEG00000007010	cpsf4	86	82.160	ENSMLUG00000010980	CPSF4	100	83.333	Myotis_lucifugus
ENSATEG00000007010	cpsf4	100	84.559	ENSNGAG00000001567	Cpsf4	100	84.559	Nannospalax_galili
ENSATEG00000007010	cpsf4	91	93.416	ENSNBRG00000003943	cpsf4	98	93.416	Neolamprologus_brichardi
ENSATEG00000007010	cpsf4	100	85.425	ENSNLEG00000011074	CPSF4	100	85.020	Nomascus_leucogenys
ENSATEG00000007010	cpsf4	100	84.559	ENSMEUG00000006955	CPSF4	100	84.559	Notamacropus_eugenii
ENSATEG00000007010	cpsf4	100	83.824	ENSOPRG00000013663	CPSF4	100	83.824	Ochotona_princeps
ENSATEG00000007010	cpsf4	98	72.016	ENSODEG00000018283	-	91	72.764	Octodon_degus
ENSATEG00000007010	cpsf4	100	67.451	ENSODEG00000009779	-	100	67.451	Octodon_degus
ENSATEG00000007010	cpsf4	100	84.559	ENSODEG00000011181	-	100	84.559	Octodon_degus
ENSATEG00000007010	cpsf4	100	93.633	ENSONIG00000008495	cpsf4	100	93.633	Oreochromis_niloticus
ENSATEG00000007010	cpsf4	100	52.878	ENSOANG00000009568	-	100	52.878	Ornithorhynchus_anatinus
ENSATEG00000007010	cpsf4	87	81.743	ENSOANG00000007729	CPSF4	100	81.743	Ornithorhynchus_anatinus
ENSATEG00000007010	cpsf4	100	83.824	ENSOCUG00000002437	CPSF4	70	83.824	Oryctolagus_cuniculus
ENSATEG00000007010	cpsf4	100	91.011	ENSORLG00000022798	cpsf4	100	91.011	Oryzias_latipes
ENSATEG00000007010	cpsf4	100	91.011	ENSORLG00020008548	cpsf4	100	91.011	Oryzias_latipes_hni
ENSATEG00000007010	cpsf4	100	90.637	ENSORLG00015019575	cpsf4	100	90.637	Oryzias_latipes_hsok
ENSATEG00000007010	cpsf4	100	90.637	ENSOMEG00000005176	cpsf4	100	90.637	Oryzias_melastigma
ENSATEG00000007010	cpsf4	100	84.191	ENSOGAG00000010884	CPSF4	100	84.191	Otolemur_garnettii
ENSATEG00000007010	cpsf4	100	73.913	ENSOARG00000018668	CPSF4	100	73.913	Ovis_aries
ENSATEG00000007010	cpsf4	100	84.191	ENSPPAG00000043355	CPSF4	100	84.191	Pan_paniscus
ENSATEG00000007010	cpsf4	100	84.559	ENSPPRG00000003134	CPSF4	100	84.559	Panthera_pardus
ENSATEG00000007010	cpsf4	90	83.673	ENSPTIG00000005604	CPSF4	90	83.673	Panthera_tigris_altaica
ENSATEG00000007010	cpsf4	100	84.191	ENSPTRG00000019453	CPSF4	100	84.191	Pan_troglodytes
ENSATEG00000007010	cpsf4	100	84.191	ENSPANG00000023123	CPSF4	100	84.191	Papio_anubis
ENSATEG00000007010	cpsf4	100	83.212	ENSPKIG00000014278	cpsf4	100	83.212	Paramormyrops_kingsleyae
ENSATEG00000007010	cpsf4	80	79.909	ENSPSIG00000011229	CPSF4	100	82.648	Pelodiscus_sinensis
ENSATEG00000007010	cpsf4	79	63.500	ENSPSIG00000018198	-	100	63.500	Pelodiscus_sinensis
ENSATEG00000007010	cpsf4	100	85.425	ENSPMGG00000017735	cpsf4	100	85.425	Periophthalmus_magnuspinnatus
ENSATEG00000007010	cpsf4	100	84.559	ENSPEMG00000004508	Cpsf4	100	84.559	Peromyscus_maniculatus_bairdii
ENSATEG00000007010	cpsf4	100	84.559	ENSPCIG00000024776	CPSF4	100	84.559	Phascolarctos_cinereus
ENSATEG00000007010	cpsf4	100	90.262	ENSPFOG00000014912	cpsf4	100	90.262	Poecilia_formosa
ENSATEG00000007010	cpsf4	100	85.081	ENSPLAG00000009599	cpsf4	100	85.081	Poecilia_latipinna
ENSATEG00000007010	cpsf4	100	90.262	ENSPMEG00000009790	cpsf4	100	90.262	Poecilia_mexicana
ENSATEG00000007010	cpsf4	100	89.888	ENSPREG00000018166	cpsf4	100	89.888	Poecilia_reticulata
ENSATEG00000007010	cpsf4	87	82.700	ENSPPYG00000017378	CPSF4	100	82.700	Pongo_abelii
ENSATEG00000007010	cpsf4	100	84.926	ENSPCAG00000001892	CPSF4	100	84.926	Procavia_capensis
ENSATEG00000007010	cpsf4	100	84.249	ENSPCOG00000012771	CPSF4	100	84.559	Propithecus_coquereli
ENSATEG00000007010	cpsf4	100	79.412	ENSPVAG00000007531	CPSF4	100	79.412	Pteropus_vampyrus
ENSATEG00000007010	cpsf4	100	94.007	ENSPNYG00000018559	cpsf4	100	94.007	Pundamilia_nyererei
ENSATEG00000007010	cpsf4	100	85.978	ENSPNAG00000003736	cpsf4	100	85.978	Pygocentrus_nattereri
ENSATEG00000007010	cpsf4	100	85.425	ENSRNOG00000000985	Cpsf4	100	84.800	Rattus_norvegicus
ENSATEG00000007010	cpsf4	87	83.122	ENSRBIG00000033886	CPSF4	100	83.122	Rhinopithecus_bieti
ENSATEG00000007010	cpsf4	100	85.425	ENSRROG00000040431	CPSF4	100	85.020	Rhinopithecus_roxellana
ENSATEG00000007010	cpsf4	100	84.191	ENSSBOG00000020493	CPSF4	100	84.536	Saimiri_boliviensis_boliviensis
ENSATEG00000007010	cpsf4	100	84.559	ENSSHAG00000011533	CPSF4	100	84.559	Sarcophilus_harrisii
ENSATEG00000007010	cpsf4	100	82.971	ENSSFOG00015007883	cpsf4	100	82.971	Scleropages_formosus
ENSATEG00000007010	cpsf4	100	90.688	ENSSMAG00000006374	cpsf4	100	90.688	Scophthalmus_maximus
ENSATEG00000007010	cpsf4	100	96.629	ENSSDUG00000018887	cpsf4	100	96.629	Seriola_dumerili
ENSATEG00000007010	cpsf4	100	97.004	ENSSLDG00000019078	cpsf4	100	97.004	Seriola_lalandi_dorsalis
ENSATEG00000007010	cpsf4	87	83.122	ENSSARG00000012416	CPSF4	100	83.122	Sorex_araneus
ENSATEG00000007010	cpsf4	96	61.250	ENSSPUG00000014803	-	97	61.250	Sphenodon_punctatus
ENSATEG00000007010	cpsf4	100	81.852	ENSSPUG00000003549	CPSF4	100	81.852	Sphenodon_punctatus
ENSATEG00000007010	cpsf4	100	91.093	ENSSPAG00000006174	cpsf4	100	91.093	Stegastes_partitus
ENSATEG00000007010	cpsf4	100	85.425	ENSSSCG00000026896	CPSF4	100	85.200	Sus_scrofa
ENSATEG00000007010	cpsf4	100	83.133	ENSTGUG00000007552	CPSF4	100	83.133	Taeniopygia_guttata
ENSATEG00000007010	cpsf4	100	88.390	ENSTRUG00000024220	cpsf4	100	88.390	Takifugu_rubripes
ENSATEG00000007010	cpsf4	100	89.513	ENSTNIG00000006265	cpsf4	100	90.262	Tetraodon_nigroviridis
ENSATEG00000007010	cpsf4	87	74.370	ENSTBEG00000011406	CPSF4	100	74.684	Tupaia_belangeri
ENSATEG00000007010	cpsf4	81	95.455	ENSTTRG00000003007	CPSF4	100	73.234	Tursiops_truncatus
ENSATEG00000007010	cpsf4	91	82.667	ENSUAMG00000008051	CPSF4	85	83.772	Ursus_americanus
ENSATEG00000007010	cpsf4	100	85.425	ENSUMAG00000009474	CPSF4	100	84.800	Ursus_maritimus
ENSATEG00000007010	cpsf4	100	85.830	ENSVVUG00000008824	CPSF4	100	85.830	Vulpes_vulpes
ENSATEG00000007010	cpsf4	100	77.778	ENSXETG00000009892	cpsf4	100	77.778	Xenopus_tropicalis
ENSATEG00000007010	cpsf4	99	58.364	ENSXETG00000004641	cpsf4l	99	58.364	Xenopus_tropicalis
ENSATEG00000007010	cpsf4	100	89.888	ENSXCOG00000016040	cpsf4	100	89.888	Xiphophorus_couchianus
ENSATEG00000007010	cpsf4	100	90.262	ENSXMAG00000024670	cpsf4	100	90.262	Xiphophorus_maculatus