EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000007016 (Gene tree)
Gene ID: 113161468
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 3859 bases
Position: chrOOHO01000002.1:6186266-6190124
Accession: 113161468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000009953	PPR	PF01535.20	9.4e-15	1	2
ENSATEP00000009953	PPR	PF01535.20	9.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000010129	-	2683	XM_026359070	ENSATEP00000009953	703 (aa)	XP_026214855	UPI000E45CEBC

Gene Model

Click here to download ENSATEG00000007016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000007016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000007016	ptcd1	80	49.743	ENSG00000248919	ATP5MF-PTCD1	78	49.497	Homo_sapiens
ENSATEG00000007016	ptcd1	80	49.743	ENSG00000106246	PTCD1	84	49.497	Homo_sapiens
ENSATEG00000007016	ptcd1	88	67.512	ENSAPOG00000010679	ptcd1	96	67.036	Acanthochromis_polyacanthus
ENSATEG00000007016	ptcd1	81	51.952	ENSAMEG00000006224	-	78	51.443	Ailuropoda_melanoleuca
ENSATEG00000007016	ptcd1	94	72.985	ENSACIG00000017861	ptcd1	98	72.836	Amphilophus_citrinellus
ENSATEG00000007016	ptcd1	88	68.396	ENSAOCG00000022617	ptcd1	94	68.082	Amphiprion_ocellaris
ENSATEG00000007016	ptcd1	99	67.832	ENSAOCG00000020741	-	99	67.413	Amphiprion_ocellaris
ENSATEG00000007016	ptcd1	99	68.252	ENSAPEG00000022632	ptcd1	99	67.832	Amphiprion_percula
ENSATEG00000007016	ptcd1	80	50.862	ENSAPLG00000006862	-	93	50.423	Anas_platyrhynchos
ENSATEG00000007016	ptcd1	84	48.604	ENSACAG00000012871	-	83	47.702	Anolis_carolinensis
ENSATEG00000007016	ptcd1	80	50.085	ENSANAG00000035790	-	86	50.084	Aotus_nancymaae
ENSATEG00000007016	ptcd1	100	70.629	ENSACLG00000002824	ptcd1	100	70.629	Astatotilapia_calliptera
ENSATEG00000007016	ptcd1	81	51.718	ENSAMXG00000037292	ptcd1	93	48.657	Astyanax_mexicanus
ENSATEG00000007016	ptcd1	85	49.605	ENSBTAG00000020440	-	78	49.604	Bos_taurus
ENSATEG00000007016	ptcd1	80	50.169	ENSCJAG00000015815	-	84	50.169	Callithrix_jacchus
ENSATEG00000007016	ptcd1	84	50.161	ENSCAFG00000015055	-	82	49.762	Canis_familiaris
ENSATEG00000007016	ptcd1	81	51.269	ENSCAFG00020014480	-	78	50.833	Canis_lupus_dingo
ENSATEG00000007016	ptcd1	86	50.000	ENSCHIG00000027000	-	84	51.333	Capra_hircus
ENSATEG00000007016	ptcd1	80	49.236	ENSTSYG00000029495	-	86	48.450	Carlito_syrichta
ENSATEG00000007016	ptcd1	80	49.746	ENSCAPG00000014660	-	93	48.697	Cavia_aperea
ENSATEG00000007016	ptcd1	80	50.423	ENSCPOG00000001780	-	87	49.349	Cavia_porcellus
ENSATEG00000007016	ptcd1	80	49.915	ENSCCAG00000034025	-	84	50.000	Cebus_capucinus
ENSATEG00000007016	ptcd1	80	50.424	ENSCATG00000040859	-	83	50.426	Cercocebus_atys
ENSATEG00000007016	ptcd1	80	50.169	ENSCLAG00000006354	-	87	48.885	Chinchilla_lanigera
ENSATEG00000007016	ptcd1	76	49.554	ENSCSAG00000017794	-	84	49.735	Chlorocebus_sabaeus
ENSATEG00000007016	ptcd1	86	47.699	ENSCPBG00000020866	-	87	47.239	Chrysemys_picta_bellii
ENSATEG00000007016	ptcd1	83	49.671	ENSCANG00000023441	-	86	49.421	Colobus_angolensis_palliatus
ENSATEG00000007016	ptcd1	88	47.773	ENSCGRG00001023686	Ptcd1	92	47.612	Cricetulus_griseus_chok1gshd
ENSATEG00000007016	ptcd1	85	48.403	ENSCGRG00000015031	Ptcd1	88	48.237	Cricetulus_griseus_crigri
ENSATEG00000007016	ptcd1	98	60.028	ENSCSEG00000002378	ptcd1	98	59.414	Cynoglossus_semilaevis
ENSATEG00000007016	ptcd1	99	66.152	ENSCVAG00000015826	ptcd1	99	65.912	Cyprinodon_variegatus
ENSATEG00000007016	ptcd1	92	66.767	ENSCVAG00000003621	ptcd1	97	66.514	Cyprinodon_variegatus
ENSATEG00000007016	ptcd1	84	52.488	ENSDARG00000076176	ptcd1	89	52.488	Danio_rerio
ENSATEG00000007016	ptcd1	81	49.660	ENSDNOG00000009957	-	92	47.167	Dasypus_novemcinctus
ENSATEG00000007016	ptcd1	85	47.619	ENSDORG00000000740	Ptcd1	91	47.634	Dipodomys_ordii
ENSATEG00000007016	ptcd1	82	39.408	ENSEBUG00000014515	ptcd1	94	38.006	Eptatretus_burgeri
ENSATEG00000007016	ptcd1	84	48.387	ENSEASG00005002480	-	87	49.436	Equus_asinus_asinus
ENSATEG00000007016	ptcd1	84	48.548	ENSECAG00000016617	-	87	49.597	Equus_caballus
ENSATEG00000007016	ptcd1	92	55.334	ENSELUG00000016517	ptcd1	94	55.334	Esox_lucius
ENSATEG00000007016	ptcd1	83	50.409	ENSFCAG00000015069	-	86	50.246	Felis_catus
ENSATEG00000007016	ptcd1	85	47.574	ENSFALG00000013803	-	88	47.574	Ficedula_albicollis
ENSATEG00000007016	ptcd1	80	50.427	ENSFDAG00000006393	-	83	50.764	Fukomys_damarensis
ENSATEG00000007016	ptcd1	78	69.120	ENSFHEG00000012491	ptcd1	93	69.517	Fundulus_heteroclitus
ENSATEG00000007016	ptcd1	87	64.309	ENSGMOG00000007639	ptcd1	97	65.442	Gadus_morhua
ENSATEG00000007016	ptcd1	80	48.586	ENSGALG00000004711	-	89	47.105	Gallus_gallus
ENSATEG00000007016	ptcd1	91	66.972	ENSGAFG00000013175	ptcd1	90	67.666	Gambusia_affinis
ENSATEG00000007016	ptcd1	88	70.906	ENSGACG00000016607	ptcd1	98	70.223	Gasterosteus_aculeatus
ENSATEG00000007016	ptcd1	79	48.866	ENSGAGG00000021832	-	86	47.739	Gopherus_agassizii
ENSATEG00000007016	ptcd1	80	49.661	ENSGGOG00000015123	-	85	49.091	Gorilla_gorilla
ENSATEG00000007016	ptcd1	100	71.189	ENSHBUG00000018275	ptcd1	100	71.189	Haplochromis_burtoni
ENSATEG00000007016	ptcd1	82	50.332	ENSHGLG00000017621	-	83	51.092	Heterocephalus_glaber_female
ENSATEG00000007016	ptcd1	82	50.332	ENSHGLG00100007218	-	83	51.092	Heterocephalus_glaber_male
ENSATEG00000007016	ptcd1	99	56.714	ENSHCOG00000010784	ptcd1	97	57.607	Hippocampus_comes
ENSATEG00000007016	ptcd1	85	49.280	ENSSTOG00000001682	-	89	49.440	Ictidomys_tridecemlineatus
ENSATEG00000007016	ptcd1	83	49.672	ENSJJAG00000000319	Ptcd1	87	50.082	Jaculus_jaculus
ENSATEG00000007016	ptcd1	95	68.382	ENSKMAG00000008708	ptcd1	96	68.135	Kryptolebias_marmoratus
ENSATEG00000007016	ptcd1	99	68.465	ENSLBEG00000008061	ptcd1	97	69.275	Labrus_bergylta
ENSATEG00000007016	ptcd1	81	51.024	ENSLACG00000011172	ptcd1	82	51.195	Latimeria_chalumnae
ENSATEG00000007016	ptcd1	85	50.998	ENSLOCG00000004833	ptcd1	98	50.318	Lepisosteus_oculatus
ENSATEG00000007016	ptcd1	81	48.639	ENSLAFG00000002588	-	87	47.890	Loxodonta_africana
ENSATEG00000007016	ptcd1	80	50.424	ENSMFAG00000041324	-	85	49.917	Macaca_fascicularis
ENSATEG00000007016	ptcd1	80	50.255	ENSMMUG00000030408	-	85	49.751	Macaca_mulatta
ENSATEG00000007016	ptcd1	80	50.424	ENSMNEG00000043786	-	85	50.083	Macaca_nemestrina
ENSATEG00000007016	ptcd1	80	44.425	ENSMLEG00000031179	-	81	38.832	Mandrillus_leucophaeus
ENSATEG00000007016	ptcd1	99	72.011	ENSMAMG00000007623	ptcd1	98	72.011	Mastacembelus_armatus
ENSATEG00000007016	ptcd1	100	70.210	ENSMZEG00005012722	ptcd1	100	70.210	Maylandia_zebra
ENSATEG00000007016	ptcd1	80	49.829	ENSMGAG00000004211	-	77	50.000	Meleagris_gallopavo
ENSATEG00000007016	ptcd1	82	48.161	ENSMICG00000017428	-	85	48.590	Microcebus_murinus
ENSATEG00000007016	ptcd1	99	70.629	ENSMMOG00000020243	ptcd1	99	70.769	Mola_mola
ENSATEG00000007016	ptcd1	84	47.087	ENSMODG00000001350	-	86	47.087	Monodelphis_domestica
ENSATEG00000007016	ptcd1	100	74.722	ENSMALG00000018442	ptcd1	99	74.583	Monopterus_albus
ENSATEG00000007016	ptcd1	84	48.856	MGP_CAROLIEiJ_G0028011	Ptcd1	88	48.529	Mus_caroli
ENSATEG00000007016	ptcd1	84	48.856	ENSMUSG00000029624	Ptcd1	88	48.529	Mus_musculus
ENSATEG00000007016	ptcd1	86	48.553	MGP_PahariEiJ_G0024580	Ptcd1	89	48.232	Mus_pahari
ENSATEG00000007016	ptcd1	84	48.693	MGP_SPRETEiJ_G0029012	Ptcd1	88	48.366	Mus_spretus
ENSATEG00000007016	ptcd1	82	50.417	ENSMPUG00000016518	-	88	50.240	Mustela_putorius_furo
ENSATEG00000007016	ptcd1	80	51.111	ENSMLUG00000010994	-	80	50.411	Myotis_lucifugus
ENSATEG00000007016	ptcd1	97	70.243	ENSNBRG00000010079	ptcd1	98	70.987	Neolamprologus_brichardi
ENSATEG00000007016	ptcd1	71	49.035	ENSNLEG00000011060	-	87	49.035	Nomascus_leucogenys
ENSATEG00000007016	ptcd1	81	48.241	ENSMEUG00000006930	-	84	48.393	Notamacropus_eugenii
ENSATEG00000007016	ptcd1	74	57.857	ENSOPRG00000013647	-	78	55.034	Ochotona_princeps
ENSATEG00000007016	ptcd1	85	72.259	ENSONIG00000003168	ptcd1	100	72.259	Oreochromis_niloticus
ENSATEG00000007016	ptcd1	82	45.779	ENSOANG00000007728	-	79	45.779	Ornithorhynchus_anatinus
ENSATEG00000007016	ptcd1	88	48.916	ENSOCUG00000010584	-	89	48.916	Oryctolagus_cuniculus
ENSATEG00000007016	ptcd1	96	65.205	ENSORLG00000009275	ptcd1	99	64.861	Oryzias_latipes
ENSATEG00000007016	ptcd1	96	65.396	ENSORLG00020000988	ptcd1	99	65.249	Oryzias_latipes_hni
ENSATEG00000007016	ptcd1	96	64.680	ENSORLG00015010557	ptcd1	99	64.338	Oryzias_latipes_hsok
ENSATEG00000007016	ptcd1	96	66.716	ENSOMEG00000020627	ptcd1	99	66.716	Oryzias_melastigma
ENSATEG00000007016	ptcd1	82	47.659	ENSOGAG00000010877	-	90	46.825	Otolemur_garnettii
ENSATEG00000007016	ptcd1	82	46.885	ENSOARG00000018676	-	85	46.875	Ovis_aries
ENSATEG00000007016	ptcd1	80	49.400	ENSPPAG00000036024	-	88	48.089	Pan_paniscus
ENSATEG00000007016	ptcd1	83	51.064	ENSPPRG00000003478	-	87	50.575	Panthera_pardus
ENSATEG00000007016	ptcd1	82	48.990	ENSPTRG00000019452	-	90	47.731	Pan_troglodytes
ENSATEG00000007016	ptcd1	80	50.594	ENSPANG00000016730	-	83	50.596	Papio_anubis
ENSATEG00000007016	ptcd1	83	53.535	ENSPKIG00000014215	ptcd1	87	53.457	Paramormyrops_kingsleyae
ENSATEG00000007016	ptcd1	82	48.080	ENSPSIG00000011184	-	99	47.412	Pelodiscus_sinensis
ENSATEG00000007016	ptcd1	70	41.279	ENSPMAG00000009667	ptcd1	100	41.188	Petromyzon_marinus
ENSATEG00000007016	ptcd1	85	46.273	ENSPCIG00000024778	-	87	46.769	Phascolarctos_cinereus
ENSATEG00000007016	ptcd1	95	64.173	ENSPFOG00000004458	ptcd1	95	64.307	Poecilia_formosa
ENSATEG00000007016	ptcd1	91	66.616	ENSPLAG00000011051	ptcd1	90	66.981	Poecilia_latipinna
ENSATEG00000007016	ptcd1	94	64.689	ENSPMEG00000020547	ptcd1	95	64.741	Poecilia_mexicana
ENSATEG00000007016	ptcd1	98	63.195	ENSPREG00000000059	ptcd1	96	63.596	Poecilia_reticulata
ENSATEG00000007016	ptcd1	83	49.013	ENSPPYG00000017377	-	91	49.013	Pongo_abelii
ENSATEG00000007016	ptcd1	73	59.259	ENSPCAG00000001852	-	83	59.259	Procavia_capensis
ENSATEG00000007016	ptcd1	85	50.081	ENSPCOG00000018596	-	88	49.840	Propithecus_coquereli
ENSATEG00000007016	ptcd1	55	56.610	ENSPVAG00000007529	-	61	56.610	Pteropus_vampyrus
ENSATEG00000007016	ptcd1	100	71.049	ENSPNYG00000019993	ptcd1	100	71.049	Pundamilia_nyererei
ENSATEG00000007016	ptcd1	81	54.132	ENSPNAG00000014931	ptcd1	88	52.512	Pygocentrus_nattereri
ENSATEG00000007016	ptcd1	91	46.381	ENSRNOG00000000987	Ptcd1	98	46.677	Rattus_norvegicus
ENSATEG00000007016	ptcd1	83	49.344	ENSRBIG00000043393	-	86	49.180	Rhinopithecus_bieti
ENSATEG00000007016	ptcd1	83	49.180	ENSRROG00000036420	-	86	49.191	Rhinopithecus_roxellana
ENSATEG00000007016	ptcd1	80	49.831	ENSSBOG00000024114	-	84	49.831	Saimiri_boliviensis_boliviensis
ENSATEG00000007016	ptcd1	80	48.061	ENSSHAG00000011376	-	92	47.308	Sarcophilus_harrisii
ENSATEG00000007016	ptcd1	82	54.828	ENSSFOG00015007909	ptcd1	82	54.664	Scleropages_formosus
ENSATEG00000007016	ptcd1	88	69.316	ENSSMAG00000000218	ptcd1	99	69.316	Scophthalmus_maximus
ENSATEG00000007016	ptcd1	96	74.711	ENSSDUG00000015671	ptcd1	98	76.383	Seriola_dumerili
ENSATEG00000007016	ptcd1	96	72.518	ENSSLDG00000014261	ptcd1	99	72.230	Seriola_lalandi_dorsalis
ENSATEG00000007016	ptcd1	81	48.926	ENSSPUG00000003540	-	86	47.170	Sphenodon_punctatus
ENSATEG00000007016	ptcd1	100	68.904	ENSSPAG00000011049	ptcd1	100	68.904	Stegastes_partitus
ENSATEG00000007016	ptcd1	80	50.427	ENSSSCG00000007622	-	89	50.582	Sus_scrofa
ENSATEG00000007016	ptcd1	83	48.235	ENSTGUG00000007563	-	97	48.822	Taeniopygia_guttata
ENSATEG00000007016	ptcd1	96	66.236	ENSTRUG00000013471	ptcd1	99	65.369	Takifugu_rubripes
ENSATEG00000007016	ptcd1	95	64.399	ENSTNIG00000008271	ptcd1	99	64.110	Tetraodon_nigroviridis
ENSATEG00000007016	ptcd1	88	46.818	ENSTBEG00000011021	-	94	46.988	Tupaia_belangeri
ENSATEG00000007016	ptcd1	83	49.675	ENSTTRG00000003006	-	88	49.675	Tursiops_truncatus
ENSATEG00000007016	ptcd1	81	51.186	ENSUAMG00000008049	-	84	50.934	Ursus_americanus
ENSATEG00000007016	ptcd1	84	50.322	ENSVVUG00000008836	-	88	49.921	Vulpes_vulpes
ENSATEG00000007016	ptcd1	81	49.404	ENSXETG00000009891	ptcd1	85	49.576	Xenopus_tropicalis
ENSATEG00000007016	ptcd1	92	67.431	ENSXMAG00000015540	ptcd1	91	67.610	Xiphophorus_maculatus