EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000007255 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 3593 bases
Position: chrOOHO01000017.1:207695-211287
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000010466	RRM_1	PF00076.22	3.6e-32	1	2
ENSATEP00000010466	RRM_1	PF00076.22	3.6e-32	2	2
ENSATEP00000010456	RRM_1	PF00076.22	7.8e-32	1	2
ENSATEP00000010456	RRM_1	PF00076.22	7.8e-32	2	2
ENSATEP00000010466	RRM_3	PF08777.11	7.4e-08	1	1
ENSATEP00000010456	RRM_3	PF08777.11	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000010649	-	780	-	ENSATEP00000010466	259 (aa)	-	-
ENSATET00000010639	-	996	-	ENSATEP00000010456	331 (aa)	-	-

Gene Model

Click here to download ENSATEG00000007255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000007255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000007255	-	82	38.991	ENSATEG00000022403	-	83	39.450
ENSATEG00000007255	-	70	38.542	ENSATEG00000019984	srsf9	73	40.933
ENSATEG00000007255	-	97	52.399	ENSATEG00000019112	srsf5b	95	50.538
ENSATEG00000007255	-	65	40.230	ENSATEG00000021567	-	67	43.787
ENSATEG00000007255	-	86	47.945	ENSATEG00000000198	srsf5a	64	65.027
ENSATEG00000007255	-	69	72.376	ENSATEG00000005680	srsf4	59	73.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000007255	-	71	80.000	ENSG00000124193	SRSF6	66	83.146	Homo_sapiens
ENSATEG00000007255	-	51	77.941	ENSAPOG00000016635	-	84	80.882	Acanthochromis_polyacanthus
ENSATEG00000007255	-	71	65.054	ENSAMEG00000003710	SRSF6	53	65.957	Ailuropoda_melanoleuca
ENSATEG00000007255	-	93	61.076	ENSACIG00000023658	-	56	84.358	Amphilophus_citrinellus
ENSATEG00000007255	-	95	77.955	ENSACIG00000020091	-	95	90.551	Amphilophus_citrinellus
ENSATEG00000007255	-	71	91.257	ENSAOCG00000004309	-	56	96.629	Amphiprion_ocellaris
ENSATEG00000007255	-	72	88.770	ENSAPEG00000020746	-	94	73.134	Amphiprion_percula
ENSATEG00000007255	-	71	82.609	ENSAPEG00000013086	-	53	85.870	Amphiprion_percula
ENSATEG00000007255	-	71	80.328	ENSACAG00000002061	SRSF6	52	83.333	Anolis_carolinensis
ENSATEG00000007255	-	71	80.000	ENSANAG00000024080	SRSF6	66	83.146	Aotus_nancymaae
ENSATEG00000007255	-	71	78.919	ENSAMXG00000042692	-	96	82.222	Astyanax_mexicanus
ENSATEG00000007255	-	71	80.749	ENSAMXG00000003101	-	50	83.957	Astyanax_mexicanus
ENSATEG00000007255	-	71	80.541	ENSBTAG00000008527	SRSF6	66	84.270	Bos_taurus
ENSATEG00000007255	-	71	80.000	ENSCJAG00000048403	SRSF6	67	82.967	Callithrix_jacchus
ENSATEG00000007255	-	71	80.541	ENSCAFG00000009289	SRSF6	66	84.270	Canis_familiaris
ENSATEG00000007255	-	71	80.541	ENSCAFG00020013559	SRSF6	66	84.270	Canis_lupus_dingo
ENSATEG00000007255	-	71	80.541	ENSCHIG00000015890	-	66	84.270	Capra_hircus
ENSATEG00000007255	-	71	80.000	ENSCHIG00000009148	-	53	81.081	Capra_hircus
ENSATEG00000007255	-	71	74.595	ENSCPOG00000011761	SRSF6	66	83.146	Cavia_porcellus
ENSATEG00000007255	-	71	70.213	ENSCCAG00000018540	-	60	72.131	Cebus_capucinus
ENSATEG00000007255	-	71	80.000	ENSCCAG00000026018	-	66	83.146	Cebus_capucinus
ENSATEG00000007255	-	71	80.000	ENSCATG00000030794	SRSF6	66	83.146	Cercocebus_atys
ENSATEG00000007255	-	83	70.404	ENSCLAG00000010247	SRSF6	66	83.146	Chinchilla_lanigera
ENSATEG00000007255	-	71	80.000	ENSCSAG00000014022	SRSF6	53	82.967	Chlorocebus_sabaeus
ENSATEG00000007255	-	50	86.111	ENSCHOG00000000561	SRSF6	53	59.140	Choloepus_hoffmanni
ENSATEG00000007255	-	71	81.818	ENSCPBG00000018200	SRSF6	53	82.162	Chrysemys_picta_bellii
ENSATEG00000007255	-	71	78.919	ENSCANG00000037774	-	53	81.868	Colobus_angolensis_palliatus
ENSATEG00000007255	-	71	80.000	ENSCGRG00001022339	Srsf6	66	83.146	Cricetulus_griseus_chok1gshd
ENSATEG00000007255	-	71	75.956	ENSDARG00000013729	srsf6a	55	68.519	Danio_rerio
ENSATEG00000007255	-	71	79.570	ENSDARG00000016783	srsf6b	98	80.645	Danio_rerio
ENSATEG00000007255	-	71	80.000	ENSDNOG00000008410	SRSF6	53	82.967	Dasypus_novemcinctus
ENSATEG00000007255	-	71	80.000	ENSDORG00000028378	Srsf6	66	83.146	Dipodomys_ordii
ENSATEG00000007255	-	71	77.297	ENSETEG00000006221	SRSF6	52	78.689	Echinops_telfairi
ENSATEG00000007255	-	71	80.541	ENSEASG00005023429	SRSF6	53	81.622	Equus_asinus_asinus
ENSATEG00000007255	-	71	80.541	ENSECAG00000023932	SRSF6	56	83.516	Equus_caballus
ENSATEG00000007255	-	71	80.311	ENSELUG00000024182	SRSF6	86	89.773	Esox_lucius
ENSATEG00000007255	-	93	64.643	ENSELUG00000013506	SRSF6	79	85.393	Esox_lucius
ENSATEG00000007255	-	71	80.541	ENSFCAG00000032814	SRSF6	53	81.622	Felis_catus
ENSATEG00000007255	-	71	81.421	ENSFHEG00000023065	srsf6a	54	83.152	Fundulus_heteroclitus
ENSATEG00000007255	-	81	66.351	ENSGMOG00000006105	srsf6a	91	57.752	Gadus_morhua
ENSATEG00000007255	-	70	81.868	ENSGMOG00000014458	srsf6a	52	79.581	Gadus_morhua
ENSATEG00000007255	-	71	81.183	ENSGALG00000000990	SRSF6	63	83.529	Gallus_gallus
ENSATEG00000007255	-	72	77.660	ENSGACG00000006084	srsf6a	53	81.522	Gasterosteus_aculeatus
ENSATEG00000007255	-	71	81.818	ENSGAGG00000003238	SRSF6	53	82.162	Gopherus_agassizii
ENSATEG00000007255	-	71	80.000	ENSGGOG00000009808	SRSF6	66	83.146	Gorilla_gorilla
ENSATEG00000007255	-	82	81.659	ENSHBUG00000006386	-	57	96.067	Haplochromis_burtoni
ENSATEG00000007255	-	74	62.371	ENSHGLG00000007701	-	56	65.000	Heterocephalus_glaber_female
ENSATEG00000007255	-	83	70.404	ENSHGLG00000007348	SRSF6	66	83.146	Heterocephalus_glaber_female
ENSATEG00000007255	-	71	77.596	ENSHCOG00000002740	srsf6a	57	81.461	Hippocampus_comes
ENSATEG00000007255	-	71	81.818	ENSIPUG00000004776	-	63	82.447	Ictalurus_punctatus
ENSATEG00000007255	-	71	80.000	ENSSTOG00000010866	SRSF6	66	83.146	Ictidomys_tridecemlineatus
ENSATEG00000007255	-	88	62.547	ENSKMAG00000011934	srsf6a	58	82.584	Kryptolebias_marmoratus
ENSATEG00000007255	-	71	80.541	ENSLBEG00000007356	srsf6a	52	84.324	Labrus_bergylta
ENSATEG00000007255	-	91	63.462	ENSLACG00000005466	SRSF6	54	84.153	Latimeria_chalumnae
ENSATEG00000007255	-	71	80.000	ENSMFAG00000036925	SRSF6	66	83.146	Macaca_fascicularis
ENSATEG00000007255	-	71	80.000	ENSMMUG00000006742	SRSF6	66	83.146	Macaca_mulatta
ENSATEG00000007255	-	71	79.459	ENSMNEG00000038270	-	53	82.418	Macaca_nemestrina
ENSATEG00000007255	-	71	79.459	ENSMNEG00000027392	-	66	82.022	Macaca_nemestrina
ENSATEG00000007255	-	71	82.065	ENSMAMG00000017161	srsf6a	53	85.326	Mastacembelus_armatus
ENSATEG00000007255	-	70	78.571	ENSMZEG00005020658	-	89	60.150	Maylandia_zebra
ENSATEG00000007255	-	71	90.164	ENSMZEG00005008032	-	56	96.067	Maylandia_zebra
ENSATEG00000007255	-	71	79.459	ENSMICG00000008537	SRSF6	66	83.146	Microcebus_murinus
ENSATEG00000007255	-	71	80.541	ENSMODG00000003107	SRSF6	54	81.967	Monodelphis_domestica
ENSATEG00000007255	-	74	75.000	ENSMALG00000003702	srsf6a	55	64.889	Monopterus_albus
ENSATEG00000007255	-	54	80.978	MGP_CAROLIEiJ_G0024606	Srsf6	66	83.146	Mus_caroli
ENSATEG00000007255	-	54	80.978	ENSMUSG00000016921	Srsf6	66	83.146	Mus_musculus
ENSATEG00000007255	-	54	80.978	MGP_PahariEiJ_G0026050	Srsf6	66	83.146	Mus_pahari
ENSATEG00000007255	-	54	80.978	MGP_SPRETEiJ_G0025528	Srsf6	66	83.146	Mus_spretus
ENSATEG00000007255	-	71	80.541	ENSMPUG00000017692	SRSF6	63	83.516	Mustela_putorius_furo
ENSATEG00000007255	-	71	60.963	ENSMLUG00000016618	SRSF6	53	60.106	Myotis_lucifugus
ENSATEG00000007255	-	71	80.000	ENSNGAG00000017560	Srsf6	66	83.146	Nannospalax_galili
ENSATEG00000007255	-	72	84.034	ENSNBRG00000014709	-	57	96.067	Neolamprologus_brichardi
ENSATEG00000007255	-	70	81.967	ENSNBRG00000001846	-	51	84.783	Neolamprologus_brichardi
ENSATEG00000007255	-	71	80.000	ENSNLEG00000006524	SRSF6	66	83.146	Nomascus_leucogenys
ENSATEG00000007255	-	71	80.541	ENSMEUG00000014615	SRSF6	60	81.967	Notamacropus_eugenii
ENSATEG00000007255	-	70	82.514	ENSONIG00000001925	-	52	84.783	Oreochromis_niloticus
ENSATEG00000007255	-	71	91.257	ENSONIG00000020247	-	53	94.972	Oreochromis_niloticus
ENSATEG00000007255	-	71	61.000	ENSOCUG00000009785	-	62	65.079	Oryctolagus_cuniculus
ENSATEG00000007255	-	70	49.724	ENSOCUG00000023999	-	70	53.714	Oryctolagus_cuniculus
ENSATEG00000007255	-	60	65.385	ENSORLG00020017506	srsf6a	91	68.627	Oryzias_latipes_hni
ENSATEG00000007255	-	71	79.459	ENSOGAG00000014468	SRSF6	53	82.418	Otolemur_garnettii
ENSATEG00000007255	-	71	77.838	ENSOARG00000003117	SRSF6	52	77.957	Ovis_aries
ENSATEG00000007255	-	71	67.027	ENSPPAG00000043131	-	56	71.978	Pan_paniscus
ENSATEG00000007255	-	71	79.459	ENSPPAG00000034327	-	53	82.418	Pan_paniscus
ENSATEG00000007255	-	71	80.541	ENSPPRG00000008917	SRSF6	53	81.622	Panthera_pardus
ENSATEG00000007255	-	71	67.027	ENSPTRG00000046274	-	56	71.978	Pan_troglodytes
ENSATEG00000007255	-	71	80.000	ENSPTRG00000044686	-	66	83.146	Pan_troglodytes
ENSATEG00000007255	-	71	80.000	ENSPANG00000035224	SRSF6	66	83.146	Papio_anubis
ENSATEG00000007255	-	93	72.800	ENSPKIG00000018463	-	91	81.522	Paramormyrops_kingsleyae
ENSATEG00000007255	-	69	70.330	ENSPKIG00000015703	-	86	66.154	Paramormyrops_kingsleyae
ENSATEG00000007255	-	94	61.635	ENSPMGG00000014963	srsf6a	55	84.783	Periophthalmus_magnuspinnatus
ENSATEG00000007255	-	71	80.541	ENSPCIG00000003820	SRSF6	66	83.146	Phascolarctos_cinereus
ENSATEG00000007255	-	92	62.848	ENSPLAG00000009243	srsf6a	80	81.102	Poecilia_latipinna
ENSATEG00000007255	-	71	80.328	ENSPMEG00000006042	SRSF6	53	83.696	Poecilia_mexicana
ENSATEG00000007255	-	71	80.000	ENSPPYG00000011019	SRSF6	53	82.967	Pongo_abelii
ENSATEG00000007255	-	71	80.541	ENSPCAG00000010954	SRSF6	55	83.516	Procavia_capensis
ENSATEG00000007255	-	71	79.459	ENSPCOG00000026364	SRSF6	66	83.146	Propithecus_coquereli
ENSATEG00000007255	-	71	80.541	ENSPVAG00000015232	SRSF6	53	81.183	Pteropus_vampyrus
ENSATEG00000007255	-	72	84.034	ENSPNYG00000004944	-	57	96.067	Pundamilia_nyererei
ENSATEG00000007255	-	70	81.967	ENSPNYG00000011272	-	50	84.783	Pundamilia_nyererei
ENSATEG00000007255	-	54	80.978	ENSRNOG00000006380	Srsf6	54	82.967	Rattus_norvegicus
ENSATEG00000007255	-	71	78.378	ENSRBIG00000041414	SRSF6	65	84.524	Rhinopithecus_bieti
ENSATEG00000007255	-	71	80.000	ENSRROG00000029989	SRSF6	66	83.146	Rhinopithecus_roxellana
ENSATEG00000007255	-	70	65.761	ENSSBOG00000034078	-	54	69.832	Saimiri_boliviensis_boliviensis
ENSATEG00000007255	-	71	80.000	ENSSBOG00000033708	-	66	83.146	Saimiri_boliviensis_boliviensis
ENSATEG00000007255	-	71	80.541	ENSSHAG00000012805	SRSF6	54	81.967	Sarcophilus_harrisii
ENSATEG00000007255	-	70	81.319	ENSSFOG00015015169	SRSF6	59	84.530	Scleropages_formosus
ENSATEG00000007255	-	95	62.099	ENSSFOG00015019681	-	53	80.829	Scleropages_formosus
ENSATEG00000007255	-	96	81.191	ENSSMAG00000017447	-	95	83.810	Scophthalmus_maximus
ENSATEG00000007255	-	71	82.065	ENSSDUG00000016097	srsf6a	53	85.326	Seriola_dumerili
ENSATEG00000007255	-	71	82.065	ENSSLDG00000022841	srsf6a	53	85.326	Seriola_lalandi_dorsalis
ENSATEG00000007255	-	71	81.421	ENSSPUG00000004967	SRSF6	63	83.529	Sphenodon_punctatus
ENSATEG00000007255	-	92	71.705	ENSSPAG00000002362	srsf6a	66	83.422	Stegastes_partitus
ENSATEG00000007255	-	71	80.541	ENSSSCG00000007362	SRSF6	60	83.516	Sus_scrofa
ENSATEG00000007255	-	71	82.514	ENSTGUG00000003455	SRSF6	53	83.060	Taeniopygia_guttata
ENSATEG00000007255	-	93	65.000	ENSTNIG00000001692	srsf6a	56	83.152	Tetraodon_nigroviridis
ENSATEG00000007255	-	71	80.541	ENSUAMG00000003559	SRSF6	66	84.270	Ursus_americanus
ENSATEG00000007255	-	71	79.781	ENSXMAG00000021849	srsf6a	54	83.333	Xiphophorus_maculatus