EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000007513 (Gene tree)
Gene ID: 113163553
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 88422 bases
Position: chrOOHO01000019.1:423369-511790
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000010674	Fox-1_C	PF12414.8	2e-17	1	1
ENSATEP00000010667	Fox-1_C	PF12414.8	2.2e-17	1	1
ENSATEP00000010674	RRM_1	PF00076.22	1.2e-17	1	1
ENSATEP00000010667	RRM_1	PF00076.22	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000010858	-	1121	-	ENSATEP00000010674	293 (aa)	-	-
ENSATET00000010851	-	1315	-	ENSATEP00000010667	312 (aa)	-	-

Gene Model

Click here to download ENSATEG00000007513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000007513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000007513	rbfox1	86	64.961	ENSATEG00000023101	-	74	63.035
ENSATEG00000007513	rbfox1	75	55.285	ENSATEG00000022649	rbfox1l	54	61.463
ENSATEG00000007513	rbfox1	91	66.171	ENSATEG00000019945	rbfox3b	73	65.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000007513	rbfox1	97	75.704	ENSG00000078328	RBFOX1	100	68.421	Homo_sapiens
ENSATEG00000007513	rbfox1	100	93.291	ENSAPOG00000003197	rbfox1	76	93.291	Acanthochromis_polyacanthus
ENSATEG00000007513	rbfox1	82	71.967	ENSAMEG00000008605	RBFOX1	93	70.238	Ailuropoda_melanoleuca
ENSATEG00000007513	rbfox1	69	83.744	ENSACIG00000005478	rbfox1	52	83.824	Amphilophus_citrinellus
ENSATEG00000007513	rbfox1	100	91.156	ENSAOCG00000008283	rbfox1	100	91.156	Amphiprion_ocellaris
ENSATEG00000007513	rbfox1	91	78.067	ENSAPEG00000010636	rbfox1	78	79.182	Amphiprion_percula
ENSATEG00000007513	rbfox1	97	69.453	ENSAPLG00000013263	RBFOX1	73	69.968	Anas_platyrhynchos
ENSATEG00000007513	rbfox1	96	66.667	ENSACAG00000004013	RBFOX1	73	66.667	Anolis_carolinensis
ENSATEG00000007513	rbfox1	97	76.056	ENSANAG00000029527	RBFOX1	70	76.761	Aotus_nancymaae
ENSATEG00000007513	rbfox1	86	75.556	ENSAMXG00000002431	rbfox1	73	74.444	Astyanax_mexicanus
ENSATEG00000007513	rbfox1	99	68.339	ENSBTAG00000007210	RBFOX1	80	68.652	Bos_taurus
ENSATEG00000007513	rbfox1	97	76.056	ENSCJAG00000017351	RBFOX1	78	66.566	Callithrix_jacchus
ENSATEG00000007513	rbfox1	97	68.810	ENSCAFG00000019082	RBFOX1	77	67.901	Canis_familiaris
ENSATEG00000007513	rbfox1	89	66.897	ENSCAFG00020024881	RBFOX1	79	66.007	Canis_lupus_dingo
ENSATEG00000007513	rbfox1	99	68.652	ENSCHIG00000023549	RBFOX1	80	68.966	Capra_hircus
ENSATEG00000007513	rbfox1	96	76.512	ENSTSYG00000005334	RBFOX1	72	76.868	Carlito_syrichta
ENSATEG00000007513	rbfox1	97	69.132	ENSCAPG00000017669	RBFOX1	74	69.805	Cavia_aperea
ENSATEG00000007513	rbfox1	97	69.132	ENSCPOG00000011314	RBFOX1	74	69.579	Cavia_porcellus
ENSATEG00000007513	rbfox1	97	76.056	ENSCCAG00000023031	RBFOX1	70	76.761	Cebus_capucinus
ENSATEG00000007513	rbfox1	97	75.704	ENSCATG00000033816	RBFOX1	70	76.408	Cercocebus_atys
ENSATEG00000007513	rbfox1	99	68.652	ENSCLAG00000012761	RBFOX1	80	68.966	Chinchilla_lanigera
ENSATEG00000007513	rbfox1	99	68.652	ENSCSAG00000008739	RBFOX1	80	68.966	Chlorocebus_sabaeus
ENSATEG00000007513	rbfox1	75	71.041	ENSCHOG00000012843	RBFOX1	51	69.231	Choloepus_hoffmanni
ENSATEG00000007513	rbfox1	100	77.460	ENSCPBG00000026626	RBFOX1	87	69.279	Chrysemys_picta_bellii
ENSATEG00000007513	rbfox1	97	75.704	ENSCANG00000033125	RBFOX1	70	76.408	Colobus_angolensis_palliatus
ENSATEG00000007513	rbfox1	97	67.846	ENSCGRG00001013729	Rbfox1	73	68.285	Cricetulus_griseus_chok1gshd
ENSATEG00000007513	rbfox1	97	67.846	ENSCGRG00000003272	Rbfox1	73	68.285	Cricetulus_griseus_crigri
ENSATEG00000007513	rbfox1	91	82.657	ENSCSEG00000008840	rbfox1	73	81.550	Cynoglossus_semilaevis
ENSATEG00000007513	rbfox1	99	75.768	ENSDARG00000014746	rbfox1	100	74.107	Danio_rerio
ENSATEG00000007513	rbfox1	99	66.172	ENSDNOG00000043612	RBFOX1	75	66.469	Dasypus_novemcinctus
ENSATEG00000007513	rbfox1	97	69.231	ENSDORG00000010024	Rbfox1	78	67.601	Dipodomys_ordii
ENSATEG00000007513	rbfox1	97	55.949	ENSETEG00000003771	RBFOX1	73	55.556	Echinops_telfairi
ENSATEG00000007513	rbfox1	100	71.914	ENSEASG00005011599	RBFOX1	77	68.210	Equus_asinus_asinus
ENSATEG00000007513	rbfox1	100	71.914	ENSECAG00000012667	RBFOX1	80	69.279	Equus_caballus
ENSATEG00000007513	rbfox1	100	76.508	ENSFCAG00000025322	RBFOX1	72	76.825	Felis_catus
ENSATEG00000007513	rbfox1	96	70.227	ENSFALG00000004027	RBFOX1	89	69.841	Ficedula_albicollis
ENSATEG00000007513	rbfox1	97	68.810	ENSFDAG00000007388	RBFOX1	73	69.256	Fukomys_damarensis
ENSATEG00000007513	rbfox1	100	77.460	ENSGALG00000034325	RBFOX1	76	77.778	Gallus_gallus
ENSATEG00000007513	rbfox1	97	76.408	ENSGAGG00000023681	RBFOX1	79	69.279	Gopherus_agassizii
ENSATEG00000007513	rbfox1	97	75.704	ENSGGOG00000016871	-	70	76.408	Gorilla_gorilla
ENSATEG00000007513	rbfox1	99	68.652	ENSHGLG00000016944	RBFOX1	80	68.966	Heterocephalus_glaber_female
ENSATEG00000007513	rbfox1	99	68.652	ENSHGLG00100003272	RBFOX1	80	68.966	Heterocephalus_glaber_male
ENSATEG00000007513	rbfox1	91	85.294	ENSHCOG00000016419	rbfox1	75	84.191	Hippocampus_comes
ENSATEG00000007513	rbfox1	100	75.316	ENSIPUG00000015215	rbfox1	81	75.685	Ictalurus_punctatus
ENSATEG00000007513	rbfox1	99	68.652	ENSSTOG00000000322	RBFOX1	80	68.966	Ictidomys_tridecemlineatus
ENSATEG00000007513	rbfox1	97	68.167	ENSJJAG00000002575	Rbfox1	72	68.608	Jaculus_jaculus
ENSATEG00000007513	rbfox1	97	89.825	ENSLBEG00000014659	rbfox1	79	89.825	Labrus_bergylta
ENSATEG00000007513	rbfox1	96	69.551	ENSLOCG00000006675	rbfox1	75	68.868	Lepisosteus_oculatus
ENSATEG00000007513	rbfox1	61	77.885	ENSLAFG00000011480	RBFOX1	68	77.990	Loxodonta_africana
ENSATEG00000007513	rbfox1	97	75.704	ENSMFAG00000036447	RBFOX1	80	68.139	Macaca_fascicularis
ENSATEG00000007513	rbfox1	97	75.704	ENSMMUG00000003458	RBFOX1	79	69.551	Macaca_mulatta
ENSATEG00000007513	rbfox1	99	75.342	ENSMNEG00000032034	RBFOX1	68	75.685	Macaca_nemestrina
ENSATEG00000007513	rbfox1	97	75.704	ENSMLEG00000015382	RBFOX1	70	76.408	Mandrillus_leucophaeus
ENSATEG00000007513	rbfox1	100	87.415	ENSMAMG00000003142	rbfox1	100	88.435	Mastacembelus_armatus
ENSATEG00000007513	rbfox1	97	68.810	ENSMGAG00000008606	RBFOX1	98	68.627	Meleagris_gallopavo
ENSATEG00000007513	rbfox1	97	75.352	ENSMICG00000034286	RBFOX1	78	70.468	Microcebus_murinus
ENSATEG00000007513	rbfox1	97	68.167	ENSMOCG00000020932	Rbfox1	73	69.205	Microtus_ochrogaster
ENSATEG00000007513	rbfox1	90	85.283	ENSMMOG00000009716	rbfox1	69	84.375	Mola_mola
ENSATEG00000007513	rbfox1	91	70.608	ENSMODG00000005826	RBFOX1	78	70.946	Monodelphis_domestica
ENSATEG00000007513	rbfox1	100	89.457	ENSMALG00000003337	rbfox1	72	86.879	Monopterus_albus
ENSATEG00000007513	rbfox1	99	68.025	MGP_CAROLIEiJ_G0020427	Rbfox1	73	68.608	Mus_caroli
ENSATEG00000007513	rbfox1	97	68.489	ENSMUSG00000008658	Rbfox1	95	67.905	Mus_musculus
ENSATEG00000007513	rbfox1	99	67.712	MGP_PahariEiJ_G0016135	Rbfox1	73	68.608	Mus_pahari
ENSATEG00000007513	rbfox1	99	68.025	MGP_SPRETEiJ_G0021321	Rbfox1	73	68.608	Mus_spretus
ENSATEG00000007513	rbfox1	97	68.810	ENSMPUG00000014822	RBFOX1	77	67.901	Mustela_putorius_furo
ENSATEG00000007513	rbfox1	61	77.885	ENSMLUG00000015896	RBFOX1	67	78.365	Myotis_lucifugus
ENSATEG00000007513	rbfox1	97	68.810	ENSNGAG00000023276	Rbfox1	74	69.481	Nannospalax_galili
ENSATEG00000007513	rbfox1	97	68.667	ENSNBRG00000011084	rbfox1	66	69.580	Neolamprologus_brichardi
ENSATEG00000007513	rbfox1	97	75.352	ENSNLEG00000010017	-	70	76.056	Nomascus_leucogenys
ENSATEG00000007513	rbfox1	81	74.153	ENSMEUG00000012525	RBFOX1	55	71.429	Notamacropus_eugenii
ENSATEG00000007513	rbfox1	82	71.967	ENSOPRG00000006199	-	52	72.574	Ochotona_princeps
ENSATEG00000007513	rbfox1	98	68.354	ENSODEG00000013166	RBFOX1	75	68.671	Octodon_degus
ENSATEG00000007513	rbfox1	99	68.339	ENSOANG00000002379	RBFOX1	80	68.652	Ornithorhynchus_anatinus
ENSATEG00000007513	rbfox1	83	72.541	ENSOCUG00000001205	-	99	72.541	Oryctolagus_cuniculus
ENSATEG00000007513	rbfox1	98	67.722	ENSOGAG00000025535	RBFOX1	75	68.038	Otolemur_garnettii
ENSATEG00000007513	rbfox1	81	62.447	ENSOARG00000005135	RBFOX1	87	61.570	Ovis_aries
ENSATEG00000007513	rbfox1	96	76.157	ENSPPAG00000036238	-	72	76.512	Pan_paniscus
ENSATEG00000007513	rbfox1	97	75.352	ENSPPRG00000006546	RBFOX1	72	75.258	Panthera_pardus
ENSATEG00000007513	rbfox1	82	70.000	ENSPTIG00000021154	RBFOX1	60	70.763	Panthera_tigris_altaica
ENSATEG00000007513	rbfox1	97	75.704	ENSPTRG00000007744	RBFOX1	70	76.408	Pan_troglodytes
ENSATEG00000007513	rbfox1	97	75.704	ENSPANG00000026500	RBFOX1	70	76.408	Papio_anubis
ENSATEG00000007513	rbfox1	100	78.413	ENSPKIG00000019353	rbfox1	88	78.730	Paramormyrops_kingsleyae
ENSATEG00000007513	rbfox1	100	76.190	ENSPKIG00000009667	-	77	77.003	Paramormyrops_kingsleyae
ENSATEG00000007513	rbfox1	99	68.966	ENSPSIG00000006523	RBFOX1	75	69.279	Pelodiscus_sinensis
ENSATEG00000007513	rbfox1	97	68.167	ENSPEMG00000017607	Rbfox1	73	68.608	Peromyscus_maniculatus_bairdii
ENSATEG00000007513	rbfox1	51	77.966	ENSPCIG00000026887	RBFOX1	62	78.531	Phascolarctos_cinereus
ENSATEG00000007513	rbfox1	97	68.810	ENSPPYG00000007079	-	77	67.593	Pongo_abelii
ENSATEG00000007513	rbfox1	97	62.379	ENSPCAG00000002630	RBFOX1	80	61.728	Procavia_capensis
ENSATEG00000007513	rbfox1	97	75.704	ENSPCOG00000025687	RBFOX1	73	75.170	Propithecus_coquereli
ENSATEG00000007513	rbfox1	97	67.524	ENSPVAG00000013467	RBFOX1	73	66.358	Pteropus_vampyrus
ENSATEG00000007513	rbfox1	91	72.917	ENSPNAG00000023109	rbfox1	73	72.222	Pygocentrus_nattereri
ENSATEG00000007513	rbfox1	99	67.712	ENSRNOG00000002827	Rbfox1	79	68.025	Rattus_norvegicus
ENSATEG00000007513	rbfox1	96	76.157	ENSRBIG00000044478	RBFOX1	80	68.966	Rhinopithecus_bieti
ENSATEG00000007513	rbfox1	97	75.704	ENSRROG00000044411	RBFOX1	89	67.593	Rhinopithecus_roxellana
ENSATEG00000007513	rbfox1	97	76.056	ENSSBOG00000033726	RBFOX1	70	76.761	Saimiri_boliviensis_boliviensis
ENSATEG00000007513	rbfox1	91	78.067	ENSSHAG00000009257	RBFOX1	76	78.439	Sarcophilus_harrisii
ENSATEG00000007513	rbfox1	92	67.730	ENSSFOG00015009955	-	67	67.832	Scleropages_formosus
ENSATEG00000007513	rbfox1	84	73.684	ENSSFOG00015023675	rbfox1	66	73.684	Scleropages_formosus
ENSATEG00000007513	rbfox1	100	92.038	ENSSMAG00000015505	rbfox1	80	92.038	Scophthalmus_maximus
ENSATEG00000007513	rbfox1	99	91.753	ENSSDUG00000016413	rbfox1	79	90.722	Seriola_dumerili
ENSATEG00000007513	rbfox1	100	94.249	ENSSLDG00000009353	rbfox1	92	93.930	Seriola_lalandi_dorsalis
ENSATEG00000007513	rbfox1	87	76.448	ENSSPUG00000009732	RBFOX1	68	76.834	Sphenodon_punctatus
ENSATEG00000007513	rbfox1	95	92.143	ENSSPAG00000009723	rbfox1	74	92.500	Stegastes_partitus
ENSATEG00000007513	rbfox1	97	68.489	ENSSSCG00000007917	RBFOX1	78	69.932	Sus_scrofa
ENSATEG00000007513	rbfox1	96	70.227	ENSTGUG00000004562	RBFOX1	74	70.550	Taeniopygia_guttata
ENSATEG00000007513	rbfox1	97	90.845	ENSTRUG00000020940	rbfox1	79	90.877	Takifugu_rubripes
ENSATEG00000007513	rbfox1	61	81.111	ENSTNIG00000002567	rbfox1	58	81.111	Tetraodon_nigroviridis
ENSATEG00000007513	rbfox1	97	68.810	ENSTTRG00000005700	RBFOX1	73	67.901	Tursiops_truncatus
ENSATEG00000007513	rbfox1	92	74.908	ENSUAMG00000024633	RBFOX1	75	73.592	Ursus_americanus
ENSATEG00000007513	rbfox1	82	72.803	ENSUMAG00000003579	RBFOX1	65	71.032	Ursus_maritimus
ENSATEG00000007513	rbfox1	61	77.885	ENSVPAG00000001284	RBFOX1	50	78.365	Vicugna_pacos
ENSATEG00000007513	rbfox1	100	76.508	ENSVVUG00000017311	RBFOX1	78	74.403	Vulpes_vulpes