EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000008209 (Gene tree)
Gene ID: 113173694
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 25891 bases
Position: chrOOHO01000008.1:8851096-8876986
Accession: ZDB-GENE-041010-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000011763	CMS1	PF14617.6	6.7e-33	1	1
ENSATEP00000011740	CMS1	PF14617.6	5.3e-32	1	1
ENSATEP00000011747	CMS1	PF14617.6	1.3e-31	1	1
ENSATEP00000011740	DEAD	PF00270.29	7.4e-06	1	1
ENSATEP00000011747	DEAD	PF00270.29	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000011937	-	1105	-	ENSATEP00000011747	313 (aa)	-	-
ENSATET00000011930	-	883	-	ENSATEP00000011740	286 (aa)	-	-
ENSATET00000011953	-	810	-	ENSATEP00000011763	269 (aa)	-	-

Gene Model

Click here to download ENSATEG00000008209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000008209's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000008209	cmss1	100	53.082	ENSG00000184220	CMSS1	98	65.000	Homo_sapiens
ENSATEG00000008209	cmss1	85	77.328	ENSAPOG00000010604	cmss1	93	83.264	Acanthochromis_polyacanthus
ENSATEG00000008209	cmss1	87	58.893	ENSAMEG00000004092	CMSS1	87	61.572	Ailuropoda_melanoleuca
ENSATEG00000008209	cmss1	91	73.664	ENSACIG00000021854	cmss1	97	74.219	Amphilophus_citrinellus
ENSATEG00000008209	cmss1	100	74.740	ENSAOCG00000013361	cmss1	100	77.241	Amphiprion_ocellaris
ENSATEG00000008209	cmss1	100	77.740	ENSAPEG00000005829	cmss1	100	78.276	Amphiprion_percula
ENSATEG00000008209	cmss1	79	60.262	ENSAPLG00000010542	CMSS1	98	60.088	Anas_platyrhynchos
ENSATEG00000008209	cmss1	98	54.737	ENSACAG00000011065	CMSS1	75	64.563	Anolis_carolinensis
ENSATEG00000008209	cmss1	100	52.901	ENSANAG00000023565	CMSS1	100	50.825	Aotus_nancymaae
ENSATEG00000008209	cmss1	100	76.451	ENSACLG00000027294	cmss1	100	76.289	Astatotilapia_calliptera
ENSATEG00000008209	cmss1	100	60.204	ENSAMXG00000002046	cmss1	100	60.544	Astyanax_mexicanus
ENSATEG00000008209	cmss1	100	54.110	ENSBTAG00000013663	CMSS1	100	52.381	Bos_taurus
ENSATEG00000008209	cmss1	100	55.631	ENSCJAG00000000610	CMSS1	100	54.828	Callithrix_jacchus
ENSATEG00000008209	cmss1	83	60.166	ENSCAFG00000009230	CMSS1	82	60.965	Canis_familiaris
ENSATEG00000008209	cmss1	73	64.796	ENSCAFG00020024156	-	63	64.500	Canis_lupus_dingo
ENSATEG00000008209	cmss1	83	60.166	ENSCAFG00020009464	-	82	60.965	Canis_lupus_dingo
ENSATEG00000008209	cmss1	97	55.894	ENSCHIG00000013003	CMSS1	82	62.281	Capra_hircus
ENSATEG00000008209	cmss1	83	59.751	ENSTSYG00000009266	CMSS1	87	61.842	Carlito_syrichta
ENSATEG00000008209	cmss1	68	56.989	ENSCAPG00000013584	CMSS1	87	56.989	Cavia_aperea
ENSATEG00000008209	cmss1	100	54.671	ENSCPOG00000014680	CMSS1	100	55.017	Cavia_porcellus
ENSATEG00000008209	cmss1	100	54.608	ENSCCAG00000034685	CMSS1	100	53.633	Cebus_capucinus
ENSATEG00000008209	cmss1	100	53.425	ENSCATG00000031980	CMSS1	100	51.903	Cercocebus_atys
ENSATEG00000008209	cmss1	80	60.345	ENSCLAG00000011241	CMSS1	97	61.404	Chinchilla_lanigera
ENSATEG00000008209	cmss1	83	57.676	ENSCSAG00000006024	CMSS1	84	64.078	Chlorocebus_sabaeus
ENSATEG00000008209	cmss1	100	42.561	ENSCHOG00000012098	CMSS1	100	40.550	Choloepus_hoffmanni
ENSATEG00000008209	cmss1	71	42.347	ENSCING00000014848	-	99	42.781	Ciona_intestinalis
ENSATEG00000008209	cmss1	100	53.425	ENSCANG00000031337	CMSS1	100	51.903	Colobus_angolensis_palliatus
ENSATEG00000008209	cmss1	100	51.546	ENSCGRG00001014305	Cmss1	100	50.512	Cricetulus_griseus_chok1gshd
ENSATEG00000008209	cmss1	79	59.389	ENSCGRG00000006722	Cmss1	88	59.649	Cricetulus_griseus_crigri
ENSATEG00000008209	cmss1	100	70.608	ENSCSEG00000004958	cmss1	100	68.581	Cynoglossus_semilaevis
ENSATEG00000008209	cmss1	100	72.759	ENSCVAG00000005039	cmss1	100	72.414	Cyprinodon_variegatus
ENSATEG00000008209	cmss1	100	62.585	ENSDARG00000112579	cmss1	100	62.329	Danio_rerio
ENSATEG00000008209	cmss1	80	60.345	ENSDNOG00000040418	CMSS1	75	64.563	Dasypus_novemcinctus
ENSATEG00000008209	cmss1	100	54.110	ENSDORG00000010461	Cmss1	100	53.979	Dipodomys_ordii
ENSATEG00000008209	cmss1	94	52.768	ENSEASG00005010966	CMSS1	94	63.592	Equus_asinus_asinus
ENSATEG00000008209	cmss1	83	58.091	ENSECAG00000015662	CMSS1	99	60.088	Equus_caballus
ENSATEG00000008209	cmss1	100	38.408	ENSEEUG00000007624	-	100	38.408	Erinaceus_europaeus
ENSATEG00000008209	cmss1	100	59.539	ENSELUG00000019459	cmss1	100	60.396	Esox_lucius
ENSATEG00000008209	cmss1	100	54.795	ENSFCAG00000044577	CMSS1	100	54.325	Felis_catus
ENSATEG00000008209	cmss1	79	58.952	ENSFALG00000005816	CMSS1	87	62.621	Ficedula_albicollis
ENSATEG00000008209	cmss1	88	59.414	ENSFDAG00000012577	CMSS1	99	62.719	Fukomys_damarensis
ENSATEG00000008209	cmss1	80	78.017	ENSFHEG00000012008	cmss1	94	75.983	Fundulus_heteroclitus
ENSATEG00000008209	cmss1	99	65.854	ENSGMOG00000016729	cmss1	100	64.808	Gadus_morhua
ENSATEG00000008209	cmss1	97	54.887	ENSGALG00000015267	CMSS1	79	64.563	Gallus_gallus
ENSATEG00000008209	cmss1	94	72.932	ENSGAFG00000021217	cmss1	96	74.308	Gambusia_affinis
ENSATEG00000008209	cmss1	99	70.035	ENSGACG00000002798	cmss1	100	70.383	Gasterosteus_aculeatus
ENSATEG00000008209	cmss1	99	52.768	ENSGAGG00000019861	CMSS1	80	65.049	Gopherus_agassizii
ENSATEG00000008209	cmss1	97	54.545	ENSGGOG00000014125	CMSS1	79	64.563	Gorilla_gorilla
ENSATEG00000008209	cmss1	100	74.744	ENSHBUG00000008431	cmss1	100	74.227	Haplochromis_burtoni
ENSATEG00000008209	cmss1	79	62.174	ENSHGLG00000019481	CMSS1	92	62.281	Heterocephalus_glaber_female
ENSATEG00000008209	cmss1	79	62.174	ENSHGLG00100010314	CMSS1	90	62.281	Heterocephalus_glaber_male
ENSATEG00000008209	cmss1	100	67.568	ENSHCOG00000003222	cmss1	100	66.892	Hippocampus_comes
ENSATEG00000008209	cmss1	100	63.574	ENSIPUG00000011591	cmss1	100	61.724	Ictalurus_punctatus
ENSATEG00000008209	cmss1	100	53.952	ENSSTOG00000019366	CMSS1	100	52.381	Ictidomys_tridecemlineatus
ENSATEG00000008209	cmss1	100	53.425	ENSJJAG00000014894	Cmss1	96	60.889	Jaculus_jaculus
ENSATEG00000008209	cmss1	94	68.627	ENSKMAG00000002390	cmss1	94	70.124	Kryptolebias_marmoratus
ENSATEG00000008209	cmss1	93	70.472	ENSLBEG00000006298	cmss1	96	73.577	Labrus_bergylta
ENSATEG00000008209	cmss1	79	63.319	ENSLACG00000009293	CMSS1	90	66.505	Latimeria_chalumnae
ENSATEG00000008209	cmss1	100	55.017	ENSLOCG00000009391	cmss1	100	55.017	Lepisosteus_oculatus
ENSATEG00000008209	cmss1	88	56.904	ENSLAFG00000017509	CMSS1	99	60.526	Loxodonta_africana
ENSATEG00000008209	cmss1	100	53.767	ENSMFAG00000045006	CMSS1	100	52.249	Macaca_fascicularis
ENSATEG00000008209	cmss1	100	53.425	ENSMMUG00000002939	CMSS1	100	51.903	Macaca_mulatta
ENSATEG00000008209	cmss1	100	53.767	ENSMNEG00000031315	CMSS1	100	52.249	Macaca_nemestrina
ENSATEG00000008209	cmss1	100	53.082	ENSMLEG00000033660	CMSS1	100	51.557	Mandrillus_leucophaeus
ENSATEG00000008209	cmss1	100	79.795	ENSMAMG00000017176	cmss1	100	77.241	Mastacembelus_armatus
ENSATEG00000008209	cmss1	100	76.451	ENSMZEG00005021886	cmss1	100	76.289	Maylandia_zebra
ENSATEG00000008209	cmss1	74	64.356	ENSMGAG00000014360	CMSS1	90	64.563	Meleagris_gallopavo
ENSATEG00000008209	cmss1	100	37.329	ENSMAUG00000020609	Cmss1	100	34.812	Mesocricetus_auratus
ENSATEG00000008209	cmss1	100	53.952	ENSMICG00000048977	CMSS1	100	51.877	Microcebus_murinus
ENSATEG00000008209	cmss1	100	53.356	ENSMOCG00000021937	Cmss1	100	52.901	Microtus_ochrogaster
ENSATEG00000008209	cmss1	90	74.390	ENSMMOG00000019794	cmss1	98	74.286	Mola_mola
ENSATEG00000008209	cmss1	85	60.408	ENSMODG00000002275	CMSS1	85	62.719	Monodelphis_domestica
ENSATEG00000008209	cmss1	100	77.816	ENSMALG00000004250	cmss1	100	76.027	Monopterus_albus
ENSATEG00000008209	cmss1	100	54.983	MGP_CAROLIEiJ_G0020824	Cmss1	100	53.242	Mus_caroli
ENSATEG00000008209	cmss1	100	54.296	ENSMUSG00000022748	Cmss1	100	52.560	Mus_musculus
ENSATEG00000008209	cmss1	100	53.020	MGP_PahariEiJ_G0016524	Cmss1	100	52.560	Mus_pahari
ENSATEG00000008209	cmss1	100	54.266	MGP_SPRETEiJ_G0021724	Cmss1	100	52.901	Mus_spretus
ENSATEG00000008209	cmss1	83	59.583	ENSMPUG00000011324	CMSS1	86	61.233	Mustela_putorius_furo
ENSATEG00000008209	cmss1	97	54.579	ENSMLUG00000001131	CMSS1	86	61.304	Myotis_lucifugus
ENSATEG00000008209	cmss1	99	53.875	ENSNGAG00000020316	Cmss1	100	51.864	Nannospalax_galili
ENSATEG00000008209	cmss1	100	76.792	ENSNBRG00000003095	cmss1	100	76.632	Neolamprologus_brichardi
ENSATEG00000008209	cmss1	100	53.767	ENSNLEG00000034172	CMSS1	100	53.535	Nomascus_leucogenys
ENSATEG00000008209	cmss1	60	64.162	ENSMEUG00000014505	CMSS1	65	68.456	Notamacropus_eugenii
ENSATEG00000008209	cmss1	100	54.671	ENSOPRG00000002986	CMSS1	100	52.218	Ochotona_princeps
ENSATEG00000008209	cmss1	100	45.329	ENSODEG00000009446	-	80	56.311	Octodon_degus
ENSATEG00000008209	cmss1	100	54.209	ENSODEG00000005226	-	100	54.671	Octodon_degus
ENSATEG00000008209	cmss1	100	47.751	ENSODEG00000001853	-	100	46.233	Octodon_degus
ENSATEG00000008209	cmss1	100	51.903	ENSODEG00000003558	-	100	51.903	Octodon_degus
ENSATEG00000008209	cmss1	91	79.468	ENSONIG00000006678	cmss1	98	80.469	Oreochromis_niloticus
ENSATEG00000008209	cmss1	97	53.532	ENSOANG00000007529	CMSS1	88	62.136	Ornithorhynchus_anatinus
ENSATEG00000008209	cmss1	83	60.581	ENSOCUG00000025366	CMSS1	82	61.404	Oryctolagus_cuniculus
ENSATEG00000008209	cmss1	100	68.966	ENSORLG00000020340	cmss1	100	67.820	Oryzias_latipes
ENSATEG00000008209	cmss1	91	63.052	ENSORLG00020012235	cmss1	87	70.874	Oryzias_latipes_hni
ENSATEG00000008209	cmss1	93	60.000	ENSORLG00015015551	cmss1	97	61.303	Oryzias_latipes_hsok
ENSATEG00000008209	cmss1	100	68.259	ENSOMEG00000012555	cmss1	100	67.698	Oryzias_melastigma
ENSATEG00000008209	cmss1	79	60.435	ENSOGAG00000002045	CMSS1	99	60.965	Otolemur_garnettii
ENSATEG00000008209	cmss1	97	55.303	ENSOARG00000017899	CMSS1	78	62.009	Ovis_aries
ENSATEG00000008209	cmss1	97	56.015	ENSPPAG00000038515	CMSS1	76	64.563	Pan_paniscus
ENSATEG00000008209	cmss1	100	54.795	ENSPPRG00000016767	CMSS1	100	54.671	Panthera_pardus
ENSATEG00000008209	cmss1	100	54.452	ENSPTIG00000018274	CMSS1	100	54.325	Panthera_tigris_altaica
ENSATEG00000008209	cmss1	100	53.767	ENSPTRG00000015157	CMSS1	100	52.862	Pan_troglodytes
ENSATEG00000008209	cmss1	79	60.000	ENSPANG00000019980	CMSS1	82	64.078	Papio_anubis
ENSATEG00000008209	cmss1	96	64.158	ENSPKIG00000012609	cmss1	97	63.019	Paramormyrops_kingsleyae
ENSATEG00000008209	cmss1	79	61.572	ENSPSIG00000003849	CMSS1	90	65.049	Pelodiscus_sinensis
ENSATEG00000008209	cmss1	74	78.218	ENSPMGG00000010286	cmss1	89	78.537	Periophthalmus_magnuspinnatus
ENSATEG00000008209	cmss1	100	52.218	ENSPEMG00000016384	Cmss1	100	50.508	Peromyscus_maniculatus_bairdii
ENSATEG00000008209	cmss1	75	51.471	ENSPMAG00000001146	cmss1	100	51.471	Petromyzon_marinus
ENSATEG00000008209	cmss1	98	54.074	ENSPCIG00000015656	CMSS1	78	63.107	Phascolarctos_cinereus
ENSATEG00000008209	cmss1	100	75.517	ENSPFOG00000016849	cmss1	100	72.759	Poecilia_formosa
ENSATEG00000008209	cmss1	100	75.172	ENSPLAG00000008323	cmss1	100	72.414	Poecilia_latipinna
ENSATEG00000008209	cmss1	100	75.517	ENSPMEG00000021020	cmss1	100	74.828	Poecilia_mexicana
ENSATEG00000008209	cmss1	91	76.426	ENSPREG00000007618	cmss1	95	70.819	Poecilia_reticulata
ENSATEG00000008209	cmss1	100	53.767	ENSPPYG00000013606	CMSS1	100	53.535	Pongo_abelii
ENSATEG00000008209	cmss1	100	54.296	ENSPCOG00000020035	CMSS1	100	51.877	Propithecus_coquereli
ENSATEG00000008209	cmss1	100	45.890	ENSPVAG00000017031	CMSS1	100	46.367	Pteropus_vampyrus
ENSATEG00000008209	cmss1	92	77.528	ENSPNYG00000013428	cmss1	97	77.358	Pundamilia_nyererei
ENSATEG00000008209	cmss1	100	61.017	ENSPNAG00000007912	cmss1	100	60.884	Pygocentrus_nattereri
ENSATEG00000008209	cmss1	92	57.200	ENSRNOG00000027888	Cmss1	93	57.613	Rattus_norvegicus
ENSATEG00000008209	cmss1	100	53.082	ENSRBIG00000037931	CMSS1	100	51.557	Rhinopithecus_bieti
ENSATEG00000008209	cmss1	100	53.082	ENSRROG00000042910	CMSS1	100	51.557	Rhinopithecus_roxellana
ENSATEG00000008209	cmss1	97	54.887	ENSSBOG00000030980	CMSS1	79	64.078	Saimiri_boliviensis_boliviensis
ENSATEG00000008209	cmss1	74	63.861	ENSSHAG00000009321	CMSS1	81	63.592	Sarcophilus_harrisii
ENSATEG00000008209	cmss1	100	61.168	ENSSFOG00015001509	cmss1	100	60.345	Scleropages_formosus
ENSATEG00000008209	cmss1	100	76.370	ENSSMAG00000001653	cmss1	100	74.658	Scophthalmus_maximus
ENSATEG00000008209	cmss1	100	81.661	ENSSDUG00000007719	cmss1	100	82.007	Seriola_dumerili
ENSATEG00000008209	cmss1	100	74.061	ENSSLDG00000012300	cmss1	99	74.061	Seriola_lalandi_dorsalis
ENSATEG00000008209	cmss1	100	46.021	ENSSARG00000003584	CMSS1	100	43.960	Sorex_araneus
ENSATEG00000008209	cmss1	79	61.039	ENSSPUG00000003865	CMSS1	99	61.739	Sphenodon_punctatus
ENSATEG00000008209	cmss1	97	81.111	ENSSPAG00000019182	cmss1	76	82.258	Stegastes_partitus
ENSATEG00000008209	cmss1	100	53.425	ENSSSCG00000011970	CMSS1	100	53.287	Sus_scrofa
ENSATEG00000008209	cmss1	79	59.825	ENSTGUG00000013635	CMSS1	97	60.633	Taeniopygia_guttata
ENSATEG00000008209	cmss1	100	69.550	ENSTRUG00000015265	cmss1	100	68.512	Takifugu_rubripes
ENSATEG00000008209	cmss1	94	64.576	ENSTNIG00000002880	cmss1	83	69.298	Tetraodon_nigroviridis
ENSATEG00000008209	cmss1	100	38.408	ENSTBEG00000016722	CMSS1	80	44.737	Tupaia_belangeri
ENSATEG00000008209	cmss1	100	52.595	ENSTTRG00000001562	CMSS1	100	51.903	Tursiops_truncatus
ENSATEG00000008209	cmss1	99	55.311	ENSUAMG00000024209	CMSS1	92	65.049	Ursus_americanus
ENSATEG00000008209	cmss1	96	51.803	ENSUMAG00000001983	CMSS1	87	62.281	Ursus_maritimus
ENSATEG00000008209	cmss1	100	41.522	ENSVPAG00000000263	CMSS1	57	63.125	Vicugna_pacos
ENSATEG00000008209	cmss1	83	60.581	ENSVVUG00000021647	-	91	60.965	Vulpes_vulpes
ENSATEG00000008209	cmss1	74	63.861	ENSVVUG00000007776	-	81	63.592	Vulpes_vulpes
ENSATEG00000008209	cmss1	100	53.979	ENSXETG00000011858	cmss1	100	52.249	Xenopus_tropicalis
ENSATEG00000008209	cmss1	97	70.863	ENSXCOG00000018724	cmss1	88	72.763	Xiphophorus_couchianus
ENSATEG00000008209	cmss1	93	71.375	ENSXMAG00000011243	cmss1	96	72.763	Xiphophorus_maculatus