EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000008433 (Gene tree)
Gene ID: 113153780
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 226724 bases
Position: chrOOHO01000017.1:30708270-30934993
Accession: 113153780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000012095	RRM_1	PF00076.22	2.9e-31	1	2
ENSATEP00000012095	RRM_1	PF00076.22	2.9e-31	2	2
ENSATEP00000012081	RRM_1	PF00076.22	5.2e-31	1	2
ENSATEP00000012081	RRM_1	PF00076.22	5.2e-31	2	2
ENSATEP00000012063	RRM_1	PF00076.22	5.7e-31	1	2
ENSATEP00000012063	RRM_1	PF00076.22	5.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000012260	-	1884	XM_026347585	ENSATEP00000012063	523 (aa)	XP_026203370	UPI000E460427
ENSATET00000012276	-	1705	-	ENSATEP00000012081	506 (aa)	-	-
ENSATET00000012291	-	1251	-	ENSATEP00000012095	416 (aa)	XP_026203372	UPI000E459185

Gene Model

Click here to download ENSATEG00000008433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000008433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000008433	-	97	65.375	ENSATEG00000018573	RBMS1	90	66.842
ENSATEG00000008433	-	89	71.159	ENSATEG00000022569	rbms2b	89	78.750
ENSATEG00000008433	-	94	72.843	ENSATEG00000024715	rbms2a	89	73.600
ENSATEG00000008433	-	82	59.593	ENSATEG00000015450	rbms1a	90	58.405
ENSATEG00000008433	-	99	83.019	ENSATEG00000024295	rbms3	99	83.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000008433	-	99	88.095	ENSG00000144642	RBMS3	100	90.152	Homo_sapiens
ENSATEG00000008433	-	100	99.760	ENSAPOG00000003432	-	100	99.760	Acanthochromis_polyacanthus
ENSATEG00000008433	-	99	74.179	ENSAPOG00000007266	rbms3	93	82.338	Acanthochromis_polyacanthus
ENSATEG00000008433	-	69	83.828	ENSAMEG00000005947	RBMS3	99	83.828	Ailuropoda_melanoleuca
ENSATEG00000008433	-	78	97.239	ENSACIG00000006987	-	89	97.239	Amphilophus_citrinellus
ENSATEG00000008433	-	88	74.590	ENSACIG00000021113	RBMS3	95	74.863	Amphilophus_citrinellus
ENSATEG00000008433	-	99	82.394	ENSAOCG00000021274	rbms3	99	82.394	Amphiprion_ocellaris
ENSATEG00000008433	-	98	96.577	ENSAOCG00000024104	-	100	92.734	Amphiprion_ocellaris
ENSATEG00000008433	-	100	91.346	ENSAPEG00000009481	-	100	91.346	Amphiprion_percula
ENSATEG00000008433	-	82	83.807	ENSAPEG00000016299	rbms3	87	87.048	Amphiprion_percula
ENSATEG00000008433	-	99	85.880	ENSAPLG00000012270	RBMS3	99	85.185	Anas_platyrhynchos
ENSATEG00000008433	-	99	88.783	ENSACAG00000028664	RBMS3	99	88.783	Anolis_carolinensis
ENSATEG00000008433	-	99	85.450	ENSANAG00000021899	RBMS3	99	85.450	Aotus_nancymaae
ENSATEG00000008433	-	100	90.205	ENSACLG00000008976	-	100	90.341	Astatotilapia_calliptera
ENSATEG00000008433	-	99	82.270	ENSACLG00000018506	rbms3	99	82.506	Astatotilapia_calliptera
ENSATEG00000008433	-	62	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSATEG00000008433	-	99	90.097	ENSAMXG00000020388	rbms3	99	90.097	Astyanax_mexicanus
ENSATEG00000008433	-	99	89.048	ENSBTAG00000044062	RBMS3	99	89.048	Bos_taurus
ENSATEG00000008433	-	99	85.450	ENSCJAG00000004312	RBMS3	99	85.450	Callithrix_jacchus
ENSATEG00000008433	-	99	84.862	ENSCAFG00000005464	RBMS3	99	84.862	Canis_familiaris
ENSATEG00000008433	-	99	84.862	ENSCAFG00020024980	RBMS3	99	84.862	Canis_lupus_dingo
ENSATEG00000008433	-	99	88.571	ENSCHIG00000009144	RBMS3	99	88.571	Capra_hircus
ENSATEG00000008433	-	76	85.455	ENSTSYG00000002615	RBMS3	99	85.455	Carlito_syrichta
ENSATEG00000008433	-	88	83.288	ENSCAPG00000017783	RBMS3	95	82.574	Cavia_aperea
ENSATEG00000008433	-	99	88.434	ENSCPOG00000006457	RBMS3	99	88.434	Cavia_porcellus
ENSATEG00000008433	-	99	85.450	ENSCCAG00000008671	RBMS3	99	85.450	Cebus_capucinus
ENSATEG00000008433	-	100	85.092	ENSCATG00000013222	RBMS3	100	85.092	Cercocebus_atys
ENSATEG00000008433	-	99	87.619	ENSCLAG00000005866	RBMS3	99	87.619	Chinchilla_lanigera
ENSATEG00000008433	-	65	87.407	ENSCSAG00000009655	RBMS3	99	87.407	Chlorocebus_sabaeus
ENSATEG00000008433	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSATEG00000008433	-	99	88.544	ENSCPBG00000022678	RBMS3	99	88.544	Chrysemys_picta_bellii
ENSATEG00000008433	-	99	85.219	ENSCANG00000032137	RBMS3	99	85.219	Colobus_angolensis_palliatus
ENSATEG00000008433	-	99	86.265	ENSCGRG00001007243	Rbms3	99	86.265	Cricetulus_griseus_chok1gshd
ENSATEG00000008433	-	99	86.265	ENSCGRG00000004599	Rbms3	99	86.265	Cricetulus_griseus_crigri
ENSATEG00000008433	-	100	98.077	ENSCSEG00000014677	-	94	100.000	Cynoglossus_semilaevis
ENSATEG00000008433	-	99	82.824	ENSCSEG00000010011	RBMS3	99	83.059	Cynoglossus_semilaevis
ENSATEG00000008433	-	100	98.801	ENSCVAG00000022814	-	100	98.956	Cyprinodon_variegatus
ENSATEG00000008433	-	99	83.810	ENSCVAG00000022354	rbms3	99	83.810	Cyprinodon_variegatus
ENSATEG00000008433	-	99	89.614	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSATEG00000008433	-	99	87.619	ENSDNOG00000016645	RBMS3	96	87.619	Dasypus_novemcinctus
ENSATEG00000008433	-	99	87.381	ENSDORG00000007220	Rbms3	99	87.381	Dipodomys_ordii
ENSATEG00000008433	-	87	83.333	ENSETEG00000009485	-	80	70.000	Echinops_telfairi
ENSATEG00000008433	-	67	54.122	ENSEBUG00000005830	rbms3	86	55.263	Eptatretus_burgeri
ENSATEG00000008433	-	99	87.857	ENSEASG00005006152	RBMS3	99	87.857	Equus_asinus_asinus
ENSATEG00000008433	-	99	87.857	ENSECAG00000017871	RBMS3	99	87.857	Equus_caballus
ENSATEG00000008433	-	90	79.545	ENSEEUG00000014337	RBMS3	100	79.545	Erinaceus_europaeus
ENSATEG00000008433	-	99	80.378	ENSELUG00000002862	rbms3	99	80.378	Esox_lucius
ENSATEG00000008433	-	92	96.335	ENSELUG00000006905	-	100	96.335	Esox_lucius
ENSATEG00000008433	-	99	87.619	ENSFCAG00000002130	RBMS3	99	87.619	Felis_catus
ENSATEG00000008433	-	99	88.783	ENSFALG00000009165	RBMS3	99	88.783	Ficedula_albicollis
ENSATEG00000008433	-	99	87.143	ENSFDAG00000008278	RBMS3	99	87.143	Fukomys_damarensis
ENSATEG00000008433	-	95	69.877	ENSFHEG00000004787	RBMS3	94	76.294	Fundulus_heteroclitus
ENSATEG00000008433	-	90	89.421	ENSGMOG00000002600	-	96	89.421	Gadus_morhua
ENSATEG00000008433	-	99	88.783	ENSGALG00000011439	RBMS3	99	88.783	Gallus_gallus
ENSATEG00000008433	-	100	99.041	ENSGAFG00000003329	-	100	99.041	Gambusia_affinis
ENSATEG00000008433	-	99	83.373	ENSGAFG00000000168	rbms3	99	83.373	Gambusia_affinis
ENSATEG00000008433	-	65	87.823	ENSGAGG00000004039	RBMS3	99	87.823	Gopherus_agassizii
ENSATEG00000008433	-	99	85.450	ENSGGOG00000007228	RBMS3	99	85.450	Gorilla_gorilla
ENSATEG00000008433	-	63	85.874	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSATEG00000008433	-	100	98.721	ENSHBUG00000019785	-	95	98.721	Haplochromis_burtoni
ENSATEG00000008433	-	99	87.619	ENSHGLG00000002170	RBMS3	99	87.619	Heterocephalus_glaber_female
ENSATEG00000008433	-	99	87.619	ENSHGLG00100014278	RBMS3	99	87.619	Heterocephalus_glaber_male
ENSATEG00000008433	-	100	97.602	ENSHCOG00000007894	-	100	97.602	Hippocampus_comes
ENSATEG00000008433	-	99	90.338	ENSIPUG00000017680	rbms3	99	90.338	Ictalurus_punctatus
ENSATEG00000008433	-	99	88.095	ENSSTOG00000006324	RBMS3	99	88.095	Ictidomys_tridecemlineatus
ENSATEG00000008433	-	99	84.048	ENSJJAG00000014708	Rbms3	99	84.286	Jaculus_jaculus
ENSATEG00000008433	-	100	99.038	ENSKMAG00000012586	-	100	99.038	Kryptolebias_marmoratus
ENSATEG00000008433	-	99	81.499	ENSKMAG00000020500	rbms3	99	81.499	Kryptolebias_marmoratus
ENSATEG00000008433	-	60	75.379	ENSLBEG00000006677	rbms3	97	75.379	Labrus_bergylta
ENSATEG00000008433	-	100	98.077	ENSLBEG00000027388	-	100	98.077	Labrus_bergylta
ENSATEG00000008433	-	99	91.148	ENSLACG00000010581	RBMS3	99	91.148	Latimeria_chalumnae
ENSATEG00000008433	-	69	91.696	ENSLOCG00000002328	rbms3	99	91.696	Lepisosteus_oculatus
ENSATEG00000008433	-	99	84.633	ENSLAFG00000000354	RBMS3	99	84.633	Loxodonta_africana
ENSATEG00000008433	-	99	87.857	ENSMFAG00000033300	RBMS3	99	87.857	Macaca_fascicularis
ENSATEG00000008433	-	99	87.857	ENSMMUG00000004404	RBMS3	99	87.857	Macaca_mulatta
ENSATEG00000008433	-	99	85.219	ENSMNEG00000035839	RBMS3	99	85.219	Macaca_nemestrina
ENSATEG00000008433	-	100	85.092	ENSMLEG00000029464	RBMS3	100	85.092	Mandrillus_leucophaeus
ENSATEG00000008433	-	94	98.980	ENSMAMG00000002176	-	100	98.977	Mastacembelus_armatus
ENSATEG00000008433	-	99	83.294	ENSMAMG00000024043	rbms3	99	84.235	Mastacembelus_armatus
ENSATEG00000008433	-	100	96.019	ENSMZEG00005026469	-	96	96.019	Maylandia_zebra
ENSATEG00000008433	-	99	82.270	ENSMZEG00005006308	rbms3	99	82.506	Maylandia_zebra
ENSATEG00000008433	-	99	86.265	ENSMAUG00000016436	Rbms3	99	86.265	Mesocricetus_auratus
ENSATEG00000008433	-	99	85.450	ENSMICG00000049249	RBMS3	99	85.450	Microcebus_murinus
ENSATEG00000008433	-	99	86.024	ENSMOCG00000006997	Rbms3	99	86.024	Microtus_ochrogaster
ENSATEG00000008433	-	100	97.596	ENSMMOG00000015071	-	100	97.596	Mola_mola
ENSATEG00000008433	-	82	84.571	ENSMMOG00000008471	RBMS3	89	87.842	Mola_mola
ENSATEG00000008433	-	99	80.580	ENSMODG00000015125	RBMS3	99	79.911	Monodelphis_domestica
ENSATEG00000008433	-	100	99.279	ENSMALG00000009155	-	100	99.279	Monopterus_albus
ENSATEG00000008433	-	99	82.824	ENSMALG00000019536	RBMS3	99	80.896	Monopterus_albus
ENSATEG00000008433	-	99	85.301	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSATEG00000008433	-	99	86.024	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSATEG00000008433	-	99	85.817	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSATEG00000008433	-	99	86.024	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSATEG00000008433	-	99	84.862	ENSMPUG00000011956	RBMS3	99	84.862	Mustela_putorius_furo
ENSATEG00000008433	-	99	88.333	ENSMLUG00000000659	RBMS3	99	88.333	Myotis_lucifugus
ENSATEG00000008433	-	99	87.952	ENSNGAG00000014039	Rbms3	99	87.952	Nannospalax_galili
ENSATEG00000008433	-	100	98.558	ENSNBRG00000018065	-	100	98.558	Neolamprologus_brichardi
ENSATEG00000008433	-	99	85.450	ENSNLEG00000004129	RBMS3	99	85.450	Nomascus_leucogenys
ENSATEG00000008433	-	99	78.490	ENSMEUG00000004772	RBMS3	99	78.490	Notamacropus_eugenii
ENSATEG00000008433	-	99	84.758	ENSOPRG00000006808	RBMS3	85	84.758	Ochotona_princeps
ENSATEG00000008433	-	99	88.095	ENSODEG00000003651	RBMS3	99	88.095	Octodon_degus
ENSATEG00000008433	-	99	76.960	ENSONIG00000007172	rbms3	99	77.197	Oreochromis_niloticus
ENSATEG00000008433	-	99	85.780	ENSOANG00000010529	RBMS3	99	85.780	Ornithorhynchus_anatinus
ENSATEG00000008433	-	99	84.174	ENSOCUG00000004840	RBMS3	99	84.174	Oryctolagus_cuniculus
ENSATEG00000008433	-	99	81.473	ENSORLG00000005370	RBMS3	99	81.473	Oryzias_latipes
ENSATEG00000008433	-	100	98.077	ENSORLG00000002306	-	100	98.077	Oryzias_latipes
ENSATEG00000008433	-	100	98.317	ENSORLG00020008496	-	100	98.317	Oryzias_latipes_hni
ENSATEG00000008433	-	99	81.235	ENSORLG00020022674	RBMS3	99	81.235	Oryzias_latipes_hni
ENSATEG00000008433	-	99	81.710	ENSORLG00015005509	rbms3	99	81.710	Oryzias_latipes_hsok
ENSATEG00000008433	-	100	98.317	ENSORLG00015015719	-	100	98.317	Oryzias_latipes_hsok
ENSATEG00000008433	-	99	82.185	ENSOMEG00000014805	RBMS3	99	82.185	Oryzias_melastigma
ENSATEG00000008433	-	92	97.906	ENSOMEG00000007677	-	100	97.906	Oryzias_melastigma
ENSATEG00000008433	-	99	84.862	ENSOARG00000014684	RBMS3	99	84.862	Ovis_aries
ENSATEG00000008433	-	99	85.450	ENSPPAG00000036519	RBMS3	99	85.450	Pan_paniscus
ENSATEG00000008433	-	99	84.758	ENSPPRG00000002761	RBMS3	99	84.758	Panthera_pardus
ENSATEG00000008433	-	99	87.381	ENSPTIG00000011568	RBMS3	99	87.381	Panthera_tigris_altaica
ENSATEG00000008433	-	99	88.095	ENSPTRG00000014709	RBMS3	99	88.095	Pan_troglodytes
ENSATEG00000008433	-	100	85.092	ENSPANG00000010234	RBMS3	100	85.092	Papio_anubis
ENSATEG00000008433	-	62	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSATEG00000008433	-	50	93.269	ENSPKIG00000016025	-	73	93.269	Paramormyrops_kingsleyae
ENSATEG00000008433	-	99	88.067	ENSPSIG00000005269	RBMS3	99	88.067	Pelodiscus_sinensis
ENSATEG00000008433	-	82	83.908	ENSPMGG00000021544	rbms3	86	86.145	Periophthalmus_magnuspinnatus
ENSATEG00000008433	-	92	98.429	ENSPMGG00000021683	-	100	98.429	Periophthalmus_magnuspinnatus
ENSATEG00000008433	-	99	83.333	ENSPEMG00000001117	Rbms3	99	83.333	Peromyscus_maniculatus_bairdii
ENSATEG00000008433	-	83	90.028	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSATEG00000008433	-	99	83.848	ENSPFOG00000017887	rbms3	99	83.848	Poecilia_formosa
ENSATEG00000008433	-	77	81.931	ENSPLAG00000016866	-	82	81.931	Poecilia_latipinna
ENSATEG00000008433	-	100	99.041	ENSPMEG00000002993	-	100	99.041	Poecilia_mexicana
ENSATEG00000008433	-	100	81.991	ENSPREG00000011880	rbms3	100	81.991	Poecilia_reticulata
ENSATEG00000008433	-	97	97.030	ENSPREG00000018221	-	97	97.222	Poecilia_reticulata
ENSATEG00000008433	-	99	71.789	ENSPPYG00000014050	RBMS3	82	71.789	Pongo_abelii
ENSATEG00000008433	-	99	65.367	ENSPCAG00000006307	RBMS3	99	65.367	Procavia_capensis
ENSATEG00000008433	-	99	85.681	ENSPCOG00000017136	RBMS3	99	85.681	Propithecus_coquereli
ENSATEG00000008433	-	89	88.000	ENSPVAG00000014037	RBMS3	99	76.147	Pteropus_vampyrus
ENSATEG00000008433	-	100	98.798	ENSPNYG00000012624	-	100	98.798	Pundamilia_nyererei
ENSATEG00000008433	-	99	82.033	ENSPNYG00000010546	rbms3	99	82.270	Pundamilia_nyererei
ENSATEG00000008433	-	99	90.097	ENSPNAG00000001800	rbms3	99	90.097	Pygocentrus_nattereri
ENSATEG00000008433	-	99	86.265	ENSRNOG00000025881	Rbms3	99	86.265	Rattus_norvegicus
ENSATEG00000008433	-	99	84.988	ENSRBIG00000035863	RBMS3	99	84.988	Rhinopithecus_bieti
ENSATEG00000008433	-	88	86.544	ENSRROG00000027512	RBMS3	94	85.492	Rhinopithecus_roxellana
ENSATEG00000008433	-	99	85.450	ENSSBOG00000020232	RBMS3	99	85.450	Saimiri_boliviensis_boliviensis
ENSATEG00000008433	-	88	83.333	ENSSHAG00000002411	RBMS3	95	82.258	Sarcophilus_harrisii
ENSATEG00000008433	-	100	94.952	ENSSFOG00015008578	rbms3	100	94.952	Scleropages_formosus
ENSATEG00000008433	-	98	92.857	ENSSMAG00000020065	-	97	93.781	Scophthalmus_maximus
ENSATEG00000008433	-	99	79.577	ENSSMAG00000004997	rbms3	99	83.607	Scophthalmus_maximus
ENSATEG00000008433	-	99	83.059	ENSSDUG00000013656	RBMS3	99	83.294	Seriola_dumerili
ENSATEG00000008433	-	100	99.760	ENSSDUG00000019287	-	100	99.760	Seriola_dumerili
ENSATEG00000008433	-	100	99.760	ENSSLDG00000013224	-	100	99.760	Seriola_lalandi_dorsalis
ENSATEG00000008433	-	99	82.710	ENSSLDG00000020276	RBMS3	99	82.944	Seriola_lalandi_dorsalis
ENSATEG00000008433	-	78	74.854	ENSSARG00000000695	RBMS3	94	73.926	Sorex_araneus
ENSATEG00000008433	-	69	86.986	ENSSPUG00000017197	RBMS3	97	85.859	Sphenodon_punctatus
ENSATEG00000008433	-	99	82.394	ENSSPAG00000020693	rbms3	99	82.629	Stegastes_partitus
ENSATEG00000008433	-	94	99.491	ENSSPAG00000003983	-	100	91.635	Stegastes_partitus
ENSATEG00000008433	-	99	88.095	ENSSSCG00000036381	RBMS3	99	88.095	Sus_scrofa
ENSATEG00000008433	-	76	85.285	ENSTGUG00000003572	RBMS3	99	85.285	Taeniopygia_guttata
ENSATEG00000008433	-	99	80.706	ENSTRUG00000021719	RBMS3	99	80.706	Takifugu_rubripes
ENSATEG00000008433	-	100	86.461	ENSTRUG00000007482	-	100	86.635	Takifugu_rubripes
ENSATEG00000008433	-	78	88.304	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSATEG00000008433	-	99	84.633	ENSTTRG00000006202	RBMS3	99	84.633	Tursiops_truncatus
ENSATEG00000008433	-	99	84.862	ENSUMAG00000000263	RBMS3	99	84.862	Ursus_maritimus
ENSATEG00000008433	-	88	75.916	ENSVPAG00000003842	RBMS3	94	75.064	Vicugna_pacos
ENSATEG00000008433	-	88	86.387	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSATEG00000008433	-	70	82.410	ENSXETG00000032055	RBMS3	98	82.410	Xenopus_tropicalis
ENSATEG00000008433	-	92	83.290	ENSXCOG00000019600	-	100	83.290	Xiphophorus_couchianus
ENSATEG00000008433	-	100	99.281	ENSXMAG00000014382	-	100	99.281	Xiphophorus_maculatus
ENSATEG00000008433	-	99	81.517	ENSXMAG00000021783	rbms3	99	81.517	Xiphophorus_maculatus