EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000008475 (Gene tree)
Gene ID: 113154623
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 38015 bases
Position: chrOOHO01000017.1:1065437-1103451
Accession: 113154623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000012125	SHQ1	PF04925.15	7.2e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000012321	-	2281	XM_026348924	ENSATEP00000012125	604 (aa)	XP_026204709	UPI000E465240

Gene Model

Click here to download ENSATEG00000008475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000008475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000008475	shq1	67	62.740	ENSG00000144736	SHQ1	96	75.000	Homo_sapiens
ENSATEG00000008475	shq1	98	76.364	ENSAPOG00000000397	shq1	99	76.364	Acanthochromis_polyacanthus
ENSATEG00000008475	shq1	89	53.165	ENSAMEG00000015140	SHQ1	76	61.785	Ailuropoda_melanoleuca
ENSATEG00000008475	shq1	99	75.862	ENSACIG00000021249	shq1	99	76.519	Amphilophus_citrinellus
ENSATEG00000008475	shq1	98	77.393	ENSAOCG00000023311	shq1	98	77.228	Amphiprion_ocellaris
ENSATEG00000008475	shq1	98	77.537	ENSAPEG00000021686	shq1	98	77.537	Amphiprion_percula
ENSATEG00000008475	shq1	72	60.135	ENSAPLG00000013926	SHQ1	87	60.135	Anas_platyrhynchos
ENSATEG00000008475	shq1	70	61.949	ENSACAG00000014809	SHQ1	65	62.955	Anolis_carolinensis
ENSATEG00000008475	shq1	77	59.623	ENSANAG00000029241	SHQ1	75	61.785	Aotus_nancymaae
ENSATEG00000008475	shq1	77	44.206	ENSANAG00000030500	-	72	45.238	Aotus_nancymaae
ENSATEG00000008475	shq1	99	73.344	ENSACLG00000023077	shq1	99	70.458	Astatotilapia_calliptera
ENSATEG00000008475	shq1	70	65.023	ENSAMXG00000043822	shq1	75	65.668	Astyanax_mexicanus
ENSATEG00000008475	shq1	89	55.596	ENSBTAG00000005436	SHQ1	75	62.700	Bos_taurus
ENSATEG00000008475	shq1	70	30.734	WBGene00021655	Y48A5A.1	91	30.843	Caenorhabditis_elegans
ENSATEG00000008475	shq1	90	51.807	ENSCJAG00000015131	SHQ1	75	61.556	Callithrix_jacchus
ENSATEG00000008475	shq1	65	60.902	ENSCAFG00000006434	SHQ1	75	62.014	Canis_familiaris
ENSATEG00000008475	shq1	65	61.153	ENSCAFG00020016743	SHQ1	75	62.243	Canis_lupus_dingo
ENSATEG00000008475	shq1	89	55.054	ENSCHIG00000012271	SHQ1	68	63.470	Capra_hircus
ENSATEG00000008475	shq1	67	57.869	ENSTSYG00000014439	SHQ1	75	59.217	Carlito_syrichta
ENSATEG00000008475	shq1	81	48.600	ENSCAPG00000009343	SHQ1	63	67.500	Cavia_aperea
ENSATEG00000008475	shq1	71	61.239	ENSCPOG00000011443	SHQ1	74	61.697	Cavia_porcellus
ENSATEG00000008475	shq1	77	45.940	ENSCCAG00000036087	-	73	46.838	Cebus_capucinus
ENSATEG00000008475	shq1	67	52.404	ENSCCAG00000027080	SHQ1	73	53.318	Cebus_capucinus
ENSATEG00000008475	shq1	67	62.981	ENSCATG00000041238	SHQ1	75	62.700	Cercocebus_atys
ENSATEG00000008475	shq1	89	53.455	ENSCLAG00000004206	SHQ1	75	62.243	Chinchilla_lanigera
ENSATEG00000008475	shq1	53	60.856	ENSCSAG00000011514	SHQ1	70	60.632	Chlorocebus_sabaeus
ENSATEG00000008475	shq1	71	62.500	ENSCPBG00000006441	SHQ1	71	62.500	Chrysemys_picta_bellii
ENSATEG00000008475	shq1	65	43.577	ENSCING00000008013	-	96	43.182	Ciona_intestinalis
ENSATEG00000008475	shq1	64	39.594	ENSCSAVG00000002332	-	99	39.679	Ciona_savignyi
ENSATEG00000008475	shq1	83	55.121	ENSCANG00000039295	SHQ1	76	62.929	Colobus_angolensis_palliatus
ENSATEG00000008475	shq1	72	60.948	ENSCGRG00001012583	Shq1	78	60.497	Cricetulus_griseus_chok1gshd
ENSATEG00000008475	shq1	72	60.948	ENSCGRG00000009849	Shq1	78	60.497	Cricetulus_griseus_crigri
ENSATEG00000008475	shq1	99	72.033	ENSCSEG00000007829	shq1	99	72.195	Cynoglossus_semilaevis
ENSATEG00000008475	shq1	98	70.302	ENSCVAG00000020049	shq1	99	70.117	Cyprinodon_variegatus
ENSATEG00000008475	shq1	72	69.053	ENSDARG00000058522	shq1	99	54.517	Danio_rerio
ENSATEG00000008475	shq1	89	53.501	ENSDNOG00000033937	SHQ1	75	62.243	Dasypus_novemcinctus
ENSATEG00000008475	shq1	67	54.916	ENSETEG00000005766	SHQ1	76	55.251	Echinops_telfairi
ENSATEG00000008475	shq1	60	46.467	ENSEBUG00000005445	shq1	73	48.308	Eptatretus_burgeri
ENSATEG00000008475	shq1	71	61.098	ENSEASG00005002237	SHQ1	75	62.100	Equus_asinus_asinus
ENSATEG00000008475	shq1	72	60.497	ENSECAG00000015673	SHQ1	74	62.100	Equus_caballus
ENSATEG00000008475	shq1	71	61.327	ENSEEUG00000010568	SHQ1	76	62.471	Erinaceus_europaeus
ENSATEG00000008475	shq1	97	63.926	ENSELUG00000003476	shq1	98	64.784	Esox_lucius
ENSATEG00000008475	shq1	80	57.637	ENSFCAG00000012781	SHQ1	76	62.471	Felis_catus
ENSATEG00000008475	shq1	67	60.817	ENSFDAG00000005595	SHQ1	68	60.271	Fukomys_damarensis
ENSATEG00000008475	shq1	98	69.000	ENSFHEG00000017552	shq1	100	69.333	Fundulus_heteroclitus
ENSATEG00000008475	shq1	64	76.093	ENSGMOG00000007350	shq1	100	76.215	Gadus_morhua
ENSATEG00000008475	shq1	72	61.312	ENSGALG00000007798	SHQ1	71	61.927	Gallus_gallus
ENSATEG00000008475	shq1	64	82.776	ENSGACG00000011797	shq1	100	82.776	Gasterosteus_aculeatus
ENSATEG00000008475	shq1	67	62.981	ENSGGOG00000034818	SHQ1	75	62.700	Gorilla_gorilla
ENSATEG00000008475	shq1	99	73.841	ENSHBUG00000010857	shq1	99	73.675	Haplochromis_burtoni
ENSATEG00000008475	shq1	89	52.043	ENSHGLG00000003637	SHQ1	86	53.097	Heterocephalus_glaber_female
ENSATEG00000008475	shq1	89	52.228	ENSHGLG00100011957	SHQ1	86	53.628	Heterocephalus_glaber_male
ENSATEG00000008475	shq1	98	67.227	ENSHCOG00000010799	shq1	99	66.891	Hippocampus_comes
ENSATEG00000008475	shq1	72	68.591	ENSIPUG00000001247	shq1	75	68.591	Ictalurus_punctatus
ENSATEG00000008475	shq1	71	59.725	ENSSTOG00000010043	SHQ1	79	59.725	Ictidomys_tridecemlineatus
ENSATEG00000008475	shq1	67	62.260	ENSJJAG00000017611	Shq1	78	61.830	Jaculus_jaculus
ENSATEG00000008475	shq1	99	72.500	ENSKMAG00000004457	shq1	99	72.833	Kryptolebias_marmoratus
ENSATEG00000008475	shq1	72	64.334	ENSLACG00000014243	SHQ1	65	64.989	Latimeria_chalumnae
ENSATEG00000008475	shq1	99	57.953	ENSLOCG00000009970	shq1	99	57.075	Lepisosteus_oculatus
ENSATEG00000008475	shq1	67	62.740	ENSMFAG00000039148	SHQ1	75	62.471	Macaca_fascicularis
ENSATEG00000008475	shq1	67	42.298	ENSMFAG00000037396	-	73	42.691	Macaca_fascicularis
ENSATEG00000008475	shq1	59	61.141	ENSMMUG00000009571	SHQ1	70	60.925	Macaca_mulatta
ENSATEG00000008475	shq1	73	42.921	ENSMMUG00000021761	-	73	42.691	Macaca_mulatta
ENSATEG00000008475	shq1	67	62.740	ENSMNEG00000032667	SHQ1	75	62.471	Macaca_nemestrina
ENSATEG00000008475	shq1	83	54.529	ENSMLEG00000038493	SHQ1	75	62.243	Mandrillus_leucophaeus
ENSATEG00000008475	shq1	99	77.994	ENSMAMG00000023432	shq1	95	78.479	Mastacembelus_armatus
ENSATEG00000008475	shq1	99	73.841	ENSMZEG00005008649	shq1	99	73.675	Maylandia_zebra
ENSATEG00000008475	shq1	72	61.348	ENSMGAG00000009640	SHQ1	72	61.556	Meleagris_gallopavo
ENSATEG00000008475	shq1	71	61.327	ENSMAUG00000022030	Shq1	77	60.870	Mesocricetus_auratus
ENSATEG00000008475	shq1	83	53.382	ENSMICG00000009224	SHQ1	75	61.327	Microcebus_murinus
ENSATEG00000008475	shq1	72	60.987	ENSMOCG00000017836	Shq1	79	60.538	Microtus_ochrogaster
ENSATEG00000008475	shq1	98	74.155	ENSMMOG00000010569	shq1	99	74.155	Mola_mola
ENSATEG00000008475	shq1	78	56.879	ENSMODG00000003926	SHQ1	78	60.046	Monodelphis_domestica
ENSATEG00000008475	shq1	99	79.339	ENSMALG00000008870	shq1	99	79.470	Monopterus_albus
ENSATEG00000008475	shq1	74	59.121	MGP_CAROLIEiJ_G0028689	Shq1	78	60.403	Mus_caroli
ENSATEG00000008475	shq1	73	59.955	ENSMUSG00000035378	Shq1	78	60.403	Mus_musculus
ENSATEG00000008475	shq1	71	61.098	MGP_PahariEiJ_G0022440	Shq1	76	62.243	Mus_pahari
ENSATEG00000008475	shq1	79	57.464	MGP_SPRETEiJ_G0029717	Shq1	78	60.403	Mus_spretus
ENSATEG00000008475	shq1	89	54.626	ENSMPUG00000017006	SHQ1	74	62.700	Mustela_putorius_furo
ENSATEG00000008475	shq1	63	58.205	ENSMLUG00000013539	SHQ1	74	58.524	Myotis_lucifugus
ENSATEG00000008475	shq1	78	51.153	ENSNGAG00000023317	Shq1	77	55.809	Nannospalax_galili
ENSATEG00000008475	shq1	84	71.068	ENSNBRG00000024004	shq1	98	71.429	Neolamprologus_brichardi
ENSATEG00000008475	shq1	77	60.294	ENSNLEG00000002731	SHQ1	75	62.700	Nomascus_leucogenys
ENSATEG00000008475	shq1	68	58.333	ENSMEUG00000009350	-	72	58.333	Notamacropus_eugenii
ENSATEG00000008475	shq1	74	59.603	ENSODEG00000009192	SHQ1	82	60.538	Octodon_degus
ENSATEG00000008475	shq1	99	73.675	ENSONIG00000020264	shq1	99	74.172	Oreochromis_niloticus
ENSATEG00000008475	shq1	89	54.414	ENSOCUG00000016695	SHQ1	76	62.247	Oryctolagus_cuniculus
ENSATEG00000008475	shq1	89	69.030	ENSORLG00000023538	shq1	92	69.030	Oryzias_latipes
ENSATEG00000008475	shq1	99	65.109	ENSORLG00020003697	shq1	99	65.109	Oryzias_latipes_hni
ENSATEG00000008475	shq1	89	69.030	ENSORLG00015021040	shq1	92	68.657	Oryzias_latipes_hsok
ENSATEG00000008475	shq1	89	70.336	ENSOMEG00000001225	shq1	92	70.709	Oryzias_melastigma
ENSATEG00000008475	shq1	77	58.436	ENSOGAG00000003898	SHQ1	77	61.364	Otolemur_garnettii
ENSATEG00000008475	shq1	97	52.318	ENSOARG00000009547	SHQ1	75	62.302	Ovis_aries
ENSATEG00000008475	shq1	77	42.739	ENSPPAG00000043263	-	74	44.773	Pan_paniscus
ENSATEG00000008475	shq1	67	63.462	ENSPPAG00000027714	SHQ1	75	63.158	Pan_paniscus
ENSATEG00000008475	shq1	89	54.792	ENSPPRG00000004769	SHQ1	76	62.471	Panthera_pardus
ENSATEG00000008475	shq1	89	52.555	ENSPTIG00000011478	SHQ1	75	59.722	Panthera_tigris_altaica
ENSATEG00000008475	shq1	67	63.462	ENSPTRG00000015106	SHQ1	75	63.158	Pan_troglodytes
ENSATEG00000008475	shq1	77	42.620	ENSPTRG00000048303	-	74	44.191	Pan_troglodytes
ENSATEG00000008475	shq1	67	62.981	ENSPANG00000002881	SHQ1	75	63.158	Papio_anubis
ENSATEG00000008475	shq1	98	55.966	ENSPKIG00000021517	shq1	76	69.838	Paramormyrops_kingsleyae
ENSATEG00000008475	shq1	72	61.486	ENSPSIG00000005536	SHQ1	72	61.486	Pelodiscus_sinensis
ENSATEG00000008475	shq1	97	63.667	ENSPMGG00000008838	shq1	98	64.177	Periophthalmus_magnuspinnatus
ENSATEG00000008475	shq1	65	62.406	ENSPEMG00000000251	Shq1	77	60.497	Peromyscus_maniculatus_bairdii
ENSATEG00000008475	shq1	71	57.798	ENSPMAG00000005372	shq1	98	58.486	Petromyzon_marinus
ENSATEG00000008475	shq1	90	69.565	ENSPFOG00000003118	shq1	98	69.982	Poecilia_formosa
ENSATEG00000008475	shq1	75	66.377	ENSPMEG00000011076	shq1	97	66.883	Poecilia_mexicana
ENSATEG00000008475	shq1	83	67.460	ENSPREG00000000591	shq1	93	68.317	Poecilia_reticulata
ENSATEG00000008475	shq1	67	63.462	ENSPPYG00000013717	SHQ1	75	63.158	Pongo_abelii
ENSATEG00000008475	shq1	68	62.857	ENSPCAG00000009035	SHQ1	76	62.785	Procavia_capensis
ENSATEG00000008475	shq1	74	59.868	ENSPCOG00000008415	SHQ1	75	62.329	Propithecus_coquereli
ENSATEG00000008475	shq1	76	57.906	ENSPVAG00000017392	SHQ1	76	61.416	Pteropus_vampyrus
ENSATEG00000008475	shq1	99	73.675	ENSPNYG00000003878	shq1	99	74.172	Pundamilia_nyererei
ENSATEG00000008475	shq1	70	71.294	ENSPNAG00000026840	shq1	99	56.822	Pygocentrus_nattereri
ENSATEG00000008475	shq1	71	60.870	ENSRNOG00000005433	Shq1	72	61.327	Rattus_norvegicus
ENSATEG00000008475	shq1	83	53.497	ENSRBIG00000026280	SHQ1	75	61.072	Rhinopithecus_bieti
ENSATEG00000008475	shq1	83	55.493	ENSRROG00000034126	SHQ1	76	63.387	Rhinopithecus_roxellana
ENSATEG00000008475	shq1	67	55.048	ENSSBOG00000021038	SHQ1	73	54.920	Saimiri_boliviensis_boliviensis
ENSATEG00000008475	shq1	72	61.400	ENSSHAG00000015077	SHQ1	78	61.400	Sarcophilus_harrisii
ENSATEG00000008475	shq1	99	59.835	ENSSFOG00015016241	shq1	78	74.126	Scleropages_formosus
ENSATEG00000008475	shq1	99	79.270	ENSSMAG00000016151	shq1	99	79.132	Scophthalmus_maximus
ENSATEG00000008475	shq1	99	79.967	ENSSDUG00000011986	shq1	99	80.858	Seriola_dumerili
ENSATEG00000008475	shq1	99	77.521	ENSSLDG00000013908	shq1	99	79.900	Seriola_lalandi_dorsalis
ENSATEG00000008475	shq1	79	48.984	ENSSARG00000007119	SHQ1	60	59.184	Sorex_araneus
ENSATEG00000008475	shq1	56	59.207	ENSSPUG00000011526	-	65	59.829	Sphenodon_punctatus
ENSATEG00000008475	shq1	67	60.577	ENSSSCG00000011518	SHQ1	75	62.100	Sus_scrofa
ENSATEG00000008475	shq1	67	62.679	ENSTGUG00000009933	SHQ1	76	62.187	Taeniopygia_guttata
ENSATEG00000008475	shq1	98	67.568	ENSTRUG00000009446	shq1	99	67.279	Takifugu_rubripes
ENSATEG00000008475	shq1	67	74.453	ENSTNIG00000007354	shq1	96	73.288	Tetraodon_nigroviridis
ENSATEG00000008475	shq1	61	74.468	ENSTBEG00000011295	SHQ1	56	74.468	Tupaia_belangeri
ENSATEG00000008475	shq1	97	51.089	ENSTTRG00000005320	SHQ1	75	61.416	Tursiops_truncatus
ENSATEG00000008475	shq1	71	61.682	ENSUMAG00000024031	SHQ1	74	62.850	Ursus_maritimus
ENSATEG00000008475	shq1	67	51.288	ENSVPAG00000004880	SHQ1	75	53.015	Vicugna_pacos
ENSATEG00000008475	shq1	65	60.902	ENSVVUG00000013906	SHQ1	75	62.014	Vulpes_vulpes
ENSATEG00000008475	shq1	73	60.360	ENSXETG00000032215	shq1	99	49.106	Xenopus_tropicalis