EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000008885 (Gene tree)
Gene ID: 113170977
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 5095 bases
Position: chrOOHO01000006.1:5991790-5996884
Accession: 113170977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000012712	Nucleoplasmin	PF03066.15	6.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000012921	-	1971	XM_026373317	ENSATEP00000012712	309 (aa)	XP_026229102	-

Gene Model

Click here to download ENSATEG00000008885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000008885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000008885	npm1a	95	42.953	ENSATEG00000006254	npm1b	95	43.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000008885	npm1a	99	78.105	ENSAPOG00000002813	npm1a	100	78.387	Acanthochromis_polyacanthus
ENSATEG00000008885	npm1a	94	77.740	ENSACIG00000014201	npm1a	99	77.740	Amphilophus_citrinellus
ENSATEG00000008885	npm1a	89	69.928	ENSAOCG00000004978	npm1a	100	69.565	Amphiprion_ocellaris
ENSATEG00000008885	npm1a	99	80.392	ENSAPEG00000008594	npm1a	100	80.323	Amphiprion_percula
ENSATEG00000008885	npm1a	97	71.333	ENSACLG00000008376	npm1a	96	70.903	Astatotilapia_calliptera
ENSATEG00000008885	npm1a	98	56.954	ENSAMXG00000010155	npm1a	98	59.272	Astyanax_mexicanus
ENSATEG00000008885	npm1a	100	63.430	ENSCSEG00000011165	npm1a	96	86.928	Cynoglossus_semilaevis
ENSATEG00000008885	npm1a	99	70.130	ENSCVAG00000008960	npm1a	99	70.779	Cyprinodon_variegatus
ENSATEG00000008885	npm1a	98	62.046	ENSDARG00000014329	npm1a	96	70.968	Danio_rerio
ENSATEG00000008885	npm1a	95	38.820	ENSEBUG00000012753	npm1a	91	38.199	Eptatretus_burgeri
ENSATEG00000008885	npm1a	99	71.429	ENSELUG00000013705	npm1a	100	71.154	Esox_lucius
ENSATEG00000008885	npm1a	99	74.434	ENSFHEG00000012496	npm1a	100	73.482	Fundulus_heteroclitus
ENSATEG00000008885	npm1a	99	67.532	ENSGAFG00000013059	npm1a	100	67.308	Gambusia_affinis
ENSATEG00000008885	npm1a	99	70.588	ENSGACG00000020319	npm1a	99	68.954	Gasterosteus_aculeatus
ENSATEG00000008885	npm1a	99	78.025	ENSHBUG00000000776	npm1a	99	77.070	Haplochromis_burtoni
ENSATEG00000008885	npm1a	99	55.873	ENSHCOG00000001059	npm1a	100	55.975	Hippocampus_comes
ENSATEG00000008885	npm1a	98	62.701	ENSIPUG00000019452	npm1	99	62.379	Ictalurus_punctatus
ENSATEG00000008885	npm1a	99	71.987	ENSKMAG00000010709	npm1a	99	71.336	Kryptolebias_marmoratus
ENSATEG00000008885	npm1a	100	75.563	ENSLBEG00000008793	npm1a	100	75.563	Labrus_bergylta
ENSATEG00000008885	npm1a	84	58.088	ENSLOCG00000009683	npm1a	100	56.884	Lepisosteus_oculatus
ENSATEG00000008885	npm1a	99	78.033	ENSMAMG00000009344	npm1a	83	77.346	Mastacembelus_armatus
ENSATEG00000008885	npm1a	99	79.487	ENSMZEG00005013717	npm1a	99	79.487	Maylandia_zebra
ENSATEG00000008885	npm1a	95	77.966	ENSMMOG00000007980	npm1a	100	77.966	Mola_mola
ENSATEG00000008885	npm1a	100	76.997	ENSMALG00000001146	npm1a	100	79.048	Monopterus_albus
ENSATEG00000008885	npm1a	99	72.063	ENSNBRG00000013172	npm1a	99	73.016	Neolamprologus_brichardi
ENSATEG00000008885	npm1a	99	72.313	ENSONIG00000001860	npm1a	98	76.623	Oreochromis_niloticus
ENSATEG00000008885	npm1a	99	76.721	ENSORLG00000010179	npm1a	99	76.721	Oryzias_latipes
ENSATEG00000008885	npm1a	99	76.721	ENSORLG00020020817	npm1a	99	76.721	Oryzias_latipes_hni
ENSATEG00000008885	npm1a	99	76.721	ENSORLG00015003439	npm1a	99	76.721	Oryzias_latipes_hsok
ENSATEG00000008885	npm1a	99	75.410	ENSOMEG00000007083	npm1a	99	75.410	Oryzias_melastigma
ENSATEG00000008885	npm1a	99	56.958	ENSPKIG00000023943	npm1a	100	56.550	Paramormyrops_kingsleyae
ENSATEG00000008885	npm1a	99	58.689	ENSPMGG00000011716	npm1a	100	58.252	Periophthalmus_magnuspinnatus
ENSATEG00000008885	npm1a	99	68.506	ENSPFOG00000019173	npm1a	100	68.269	Poecilia_formosa
ENSATEG00000008885	npm1a	99	67.742	ENSPLAG00000001093	npm1a	100	67.197	Poecilia_latipinna
ENSATEG00000008885	npm1a	99	68.506	ENSPMEG00000012523	npm1a	100	68.269	Poecilia_mexicana
ENSATEG00000008885	npm1a	99	71.242	ENSPREG00000001647	npm1a	100	70.645	Poecilia_reticulata
ENSATEG00000008885	npm1a	99	78.641	ENSPNYG00000019321	npm1a	99	77.670	Pundamilia_nyererei
ENSATEG00000008885	npm1a	98	59.223	ENSPNAG00000026891	npm1a	99	60.194	Pygocentrus_nattereri
ENSATEG00000008885	npm1a	99	63.430	ENSSFOG00015007074	npm1a	100	62.939	Scleropages_formosus
ENSATEG00000008885	npm1a	100	77.885	ENSSMAG00000019090	npm1a	100	77.885	Scophthalmus_maximus
ENSATEG00000008885	npm1a	100	82.637	ENSSDUG00000015609	npm1a	100	82.958	Seriola_dumerili
ENSATEG00000008885	npm1a	100	82.637	ENSSLDG00000017849	npm1a	100	82.958	Seriola_lalandi_dorsalis
ENSATEG00000008885	npm1a	99	69.608	ENSSPAG00000021660	npm1a	100	68.932	Stegastes_partitus
ENSATEG00000008885	npm1a	99	78.247	ENSTRUG00000024003	npm1a	100	78.205	Takifugu_rubripes
ENSATEG00000008885	npm1a	100	72.990	ENSTNIG00000010773	npm1a	100	73.955	Tetraodon_nigroviridis
ENSATEG00000008885	npm1a	99	62.581	ENSXCOG00000005958	npm1a	99	67.119	Xiphophorus_couchianus
ENSATEG00000008885	npm1a	99	70.323	ENSXMAG00000000396	npm1a	100	69.745	Xiphophorus_maculatus