EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000009052 (Gene tree)
Gene ID: 113155138
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 6619 bases
Position: chrOOHO01000017.1:41457013-41463631
Accession: 113155138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000012936	MMR_HSR1	PF01926.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000013151	-	5147	-	ENSATEP00000012936	218 (aa)	XP_026205449	UPI000E453EC9

Gene Model

Click here to download ENSATEG00000009052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000009052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000009052	rab42a	75	35.366	ENSATEG00000014748	rab5aa	75	35.366
ENSATEG00000009052	rab42a	73	32.919	ENSATEG00000021300	kras	98	31.414
ENSATEG00000009052	rab42a	72	39.623	ENSATEG00000014958	si:dkey-13a21.4	77	39.623
ENSATEG00000009052	rab42a	88	61.026	ENSATEG00000010784	si:dkey-34d22.5	76	61.026
ENSATEG00000009052	rab42a	78	46.784	ENSATEG00000012781	-	76	46.784
ENSATEG00000009052	rab42a	76	40.000	ENSATEG00000021911	rab18a	80	40.000
ENSATEG00000009052	rab42a	72	40.000	ENSATEG00000017702	rab33a	72	40.000
ENSATEG00000009052	rab42a	78	32.948	ENSATEG00000023047	rab34a	66	32.184
ENSATEG00000009052	rab42a	87	46.842	ENSATEG00000002553	rab2a	94	46.842
ENSATEG00000009052	rab42a	75	39.521	ENSATEG00000004488	rab9b	78	39.521
ENSATEG00000009052	rab42a	92	39.000	ENSATEG00000023725	-	91	39.000
ENSATEG00000009052	rab42a	85	40.860	ENSATEG00000019683	rab12	79	40.000
ENSATEG00000009052	rab42a	75	30.303	ENSATEG00000001111	rabl2	72	30.303
ENSATEG00000009052	rab42a	69	33.775	ENSATEG00000020001	hrasb	85	32.927
ENSATEG00000009052	rab42a	84	40.217	ENSATEG00000002479	rab1ba	91	40.217
ENSATEG00000009052	rab42a	71	40.252	ENSATEG00000022993	-	65	40.252
ENSATEG00000009052	rab42a	97	35.071	ENSATEG00000012459	-	94	35.071
ENSATEG00000009052	rab42a	85	30.151	ENSATEG00000014272	rasl11a	75	30.151
ENSATEG00000009052	rab42a	92	31.863	ENSATEG00000024739	RAB29	95	31.863
ENSATEG00000009052	rab42a	85	33.333	ENSATEG00000020171	rheb	94	33.333
ENSATEG00000009052	rab42a	75	43.293	ENSATEG00000013281	rab35b	80	43.293
ENSATEG00000009052	rab42a	79	42.775	ENSATEG00000003430	zgc:171927	80	42.775
ENSATEG00000009052	rab42a	70	36.364	ENSATEG00000012108	si:ch73-116o1.2	79	36.145
ENSATEG00000009052	rab42a	83	42.222	ENSATEG00000006124	rab25b	86	42.222
ENSATEG00000009052	rab42a	80	41.714	ENSATEG00000019238	si:dkey-16l2.16	82	41.714
ENSATEG00000009052	rab42a	72	34.177	ENSATEG00000020913	rab23	74	34.839
ENSATEG00000009052	rab42a	72	34.395	ENSATEG00000008400	rras	85	33.529
ENSATEG00000009052	rab42a	82	41.573	ENSATEG00000008052	rab1ab	87	41.573
ENSATEG00000009052	rab42a	92	39.500	ENSATEG00000023730	rab11ba	91	39.500
ENSATEG00000009052	rab42a	75	31.325	ENSATEG00000004893	si:cabz01085950.1	82	31.325
ENSATEG00000009052	rab42a	69	44.079	ENSATEG00000016312	rab33ba	62	44.079
ENSATEG00000009052	rab42a	76	34.940	ENSATEG00000007298	rras2	81	34.940
ENSATEG00000009052	rab42a	82	36.170	ENSATEG00000007761	zgc:101559	80	36.170
ENSATEG00000009052	rab42a	98	38.785	ENSATEG00000018600	rab14	97	38.785
ENSATEG00000009052	rab42a	77	33.929	ENSATEG00000017315	-	89	33.929
ENSATEG00000009052	rab42a	73	44.375	ENSATEG00000010475	rab30	78	44.375
ENSATEG00000009052	rab42a	96	35.981	ENSATEG00000019023	rab15	96	35.981
ENSATEG00000009052	rab42a	71	36.306	ENSATEG00000006851	rab34b	63	36.306
ENSATEG00000009052	rab42a	92	39.000	ENSATEG00000017696	rab11bb	91	39.000
ENSATEG00000009052	rab42a	75	36.585	ENSATEG00000001937	rab5c	74	36.585
ENSATEG00000009052	rab42a	92	38.806	ENSATEG00000022531	rab11a	93	38.806
ENSATEG00000009052	rab42a	76	38.235	ENSATEG00000013396	rab9a	83	38.235
ENSATEG00000009052	rab42a	98	37.850	ENSATEG00000012604	-	97	37.850
ENSATEG00000009052	rab42a	74	34.940	ENSATEG00000017237	RAB7A	79	34.940
ENSATEG00000009052	rab42a	77	41.916	ENSATEG00000023662	-	83	41.916
ENSATEG00000009052	rab42a	74	34.940	ENSATEG00000002860	RAB7A	79	34.940
ENSATEG00000009052	rab42a	84	42.623	ENSATEG00000006156	rab11al	84	42.623
ENSATEG00000009052	rab42a	100	54.128	ENSATEG00000009865	RAB39B	100	54.128
ENSATEG00000009052	rab42a	72	39.490	ENSATEG00000015992	rab41	73	39.490
ENSATEG00000009052	rab42a	74	36.025	ENSATEG00000011879	rab6bb	75	36.025
ENSATEG00000009052	rab42a	100	55.046	ENSATEG00000013086	-	100	55.046
ENSATEG00000009052	rab42a	86	32.632	ENSATEG00000003390	rab36	70	32.632
ENSATEG00000009052	rab42a	76	39.412	ENSATEG00000018261	RAB9A	78	39.412
ENSATEG00000009052	rab42a	76	41.212	ENSATEG00000002952	rab18b	80	41.212
ENSATEG00000009052	rab42a	77	42.857	ENSATEG00000014851	rab25a	79	42.857
ENSATEG00000009052	rab42a	79	43.023	ENSATEG00000015844	-	84	43.023
ENSATEG00000009052	rab42a	75	34.756	ENSATEG00000025079	rab22a	84	34.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000009052	rab42a	100	95.872	ENSAPOG00000009188	rab42a	100	95.872	Acanthochromis_polyacanthus
ENSATEG00000009052	rab42a	100	94.495	ENSACIG00000003102	rab42a	100	94.495	Amphilophus_citrinellus
ENSATEG00000009052	rab42a	100	95.872	ENSAOCG00000012921	rab42a	83	95.872	Amphiprion_ocellaris
ENSATEG00000009052	rab42a	100	95.872	ENSAPEG00000007713	rab42a	83	95.872	Amphiprion_percula
ENSATEG00000009052	rab42a	100	94.954	ENSACLG00000007514	rab42a	100	94.954	Astatotilapia_calliptera
ENSATEG00000009052	rab42a	100	89.908	ENSAMXG00000032729	rab42a	100	89.908	Astyanax_mexicanus
ENSATEG00000009052	rab42a	100	91.743	ENSCSEG00000010582	rab42a	100	91.743	Cynoglossus_semilaevis
ENSATEG00000009052	rab42a	100	89.450	ENSDARG00000034215	rab42a	100	89.450	Danio_rerio
ENSATEG00000009052	rab42a	100	47.032	ENSDARG00000102580	CU571310.1	99	47.032	Danio_rerio
ENSATEG00000009052	rab42a	100	89.908	ENSELUG00000010345	rab42a	100	89.908	Esox_lucius
ENSATEG00000009052	rab42a	100	94.495	ENSFHEG00000013106	rab42a	100	94.495	Fundulus_heteroclitus
ENSATEG00000009052	rab42a	100	93.119	ENSGAFG00000002141	rab42a	100	93.119	Gambusia_affinis
ENSATEG00000009052	rab42a	100	94.954	ENSHBUG00000015126	rab42a	82	94.954	Haplochromis_burtoni
ENSATEG00000009052	rab42a	100	86.697	ENSIPUG00000011376	rab42a	100	86.697	Ictalurus_punctatus
ENSATEG00000009052	rab42a	100	94.037	ENSKMAG00000007267	rab42a	100	94.037	Kryptolebias_marmoratus
ENSATEG00000009052	rab42a	100	94.954	ENSLBEG00000001193	rab42a	100	95.872	Labrus_bergylta
ENSATEG00000009052	rab42a	100	64.220	ENSLACG00000012755	-	100	64.220	Latimeria_chalumnae
ENSATEG00000009052	rab42a	100	52.055	ENSLOCG00000015825	-	99	52.055	Lepisosteus_oculatus
ENSATEG00000009052	rab42a	100	83.028	ENSLOCG00000003453	rab42a	100	83.028	Lepisosteus_oculatus
ENSATEG00000009052	rab42a	100	95.413	ENSMAMG00000002296	rab42a	100	95.413	Mastacembelus_armatus
ENSATEG00000009052	rab42a	100	94.954	ENSMZEG00005012460	rab42a	82	94.954	Maylandia_zebra
ENSATEG00000009052	rab42a	100	91.743	ENSMMOG00000014358	rab42a	100	91.743	Mola_mola
ENSATEG00000009052	rab42a	100	94.037	ENSNBRG00000021487	rab42a	82	94.037	Neolamprologus_brichardi
ENSATEG00000009052	rab42a	100	93.119	ENSORLG00000022335	rab42a	100	93.119	Oryzias_latipes
ENSATEG00000009052	rab42a	100	93.119	ENSORLG00020013895	rab42a	100	93.119	Oryzias_latipes_hni
ENSATEG00000009052	rab42a	100	93.119	ENSORLG00015004273	rab42a	100	93.119	Oryzias_latipes_hsok
ENSATEG00000009052	rab42a	100	93.119	ENSOMEG00000020418	rab42a	100	93.119	Oryzias_melastigma
ENSATEG00000009052	rab42a	100	77.523	ENSPKIG00000021215	-	100	77.523	Paramormyrops_kingsleyae
ENSATEG00000009052	rab42a	99	47.465	ENSPKIG00000015234	-	99	47.465	Paramormyrops_kingsleyae
ENSATEG00000009052	rab42a	90	95.939	ENSPMGG00000024112	rab42a	90	95.939	Periophthalmus_magnuspinnatus
ENSATEG00000009052	rab42a	100	92.661	ENSPFOG00000004838	rab42a	82	92.661	Poecilia_formosa
ENSATEG00000009052	rab42a	100	92.661	ENSPLAG00000005628	rab42a	100	92.661	Poecilia_latipinna
ENSATEG00000009052	rab42a	100	92.661	ENSPMEG00000019497	rab42a	100	92.661	Poecilia_mexicana
ENSATEG00000009052	rab42a	100	93.119	ENSPREG00000013962	rab42a	100	93.119	Poecilia_reticulata
ENSATEG00000009052	rab42a	100	94.954	ENSPNYG00000010325	rab42a	82	94.954	Pundamilia_nyererei
ENSATEG00000009052	rab42a	100	89.450	ENSPNAG00000016567	rab42a	100	89.450	Pygocentrus_nattereri
ENSATEG00000009052	rab42a	100	84.404	ENSSFOG00015020732	rab42a	100	84.404	Scleropages_formosus
ENSATEG00000009052	rab42a	100	47.032	ENSSFOG00015016000	-	97	47.032	Scleropages_formosus
ENSATEG00000009052	rab42a	100	92.202	ENSSMAG00000020311	rab42a	100	92.202	Scophthalmus_maximus
ENSATEG00000009052	rab42a	100	94.037	ENSSDUG00000011851	rab42a	100	94.037	Seriola_dumerili
ENSATEG00000009052	rab42a	100	94.037	ENSSLDG00000020354	rab42a	100	94.037	Seriola_lalandi_dorsalis
ENSATEG00000009052	rab42a	100	95.872	ENSSPAG00000016167	rab42a	100	95.872	Stegastes_partitus
ENSATEG00000009052	rab42a	100	94.495	ENSTRUG00000010224	rab42a	100	94.495	Takifugu_rubripes
ENSATEG00000009052	rab42a	100	93.578	ENSXCOG00000003428	rab42a	100	93.578	Xiphophorus_couchianus
ENSATEG00000009052	rab42a	100	93.578	ENSXMAG00000028376	rab42a	100	93.578	Xiphophorus_maculatus