EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000009348 (Gene tree)
Gene ID: 113165973
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 2806 bases
Position: chrOOHO01000020.1:4188379-4191184
Accession: 113165973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000013369	HVSL	PF09749.9	8.2e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000013587	-	1059	-	ENSATEP00000013369	281 (aa)	XP_026221608	UPI000E454D83

Gene Model

Click here to download ENSATEG00000009348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000009348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000009348	usb1	82	51.948	ENSG00000103005	USB1	100	53.738	Homo_sapiens
ENSATEG00000009348	usb1	99	73.852	ENSAPOG00000011942	usb1	99	72.598	Acanthochromis_polyacanthus
ENSATEG00000009348	usb1	86	52.049	ENSAMEG00000017205	USB1	98	50.000	Ailuropoda_melanoleuca
ENSATEG00000009348	usb1	86	78.926	ENSACIG00000012234	usb1	89	78.926	Amphilophus_citrinellus
ENSATEG00000009348	usb1	100	75.887	ENSAOCG00000014831	usb1	100	75.887	Amphiprion_ocellaris
ENSATEG00000009348	usb1	100	75.177	ENSAPEG00000000296	usb1	100	75.177	Amphiprion_percula
ENSATEG00000009348	usb1	79	55.310	ENSAPLG00000002756	USB1	100	55.310	Anas_platyrhynchos
ENSATEG00000009348	usb1	80	51.101	ENSACAG00000015481	USB1	99	51.101	Anolis_carolinensis
ENSATEG00000009348	usb1	82	51.948	ENSANAG00000035640	USB1	99	48.289	Aotus_nancymaae
ENSATEG00000009348	usb1	99	74.558	ENSACLG00000020586	usb1	99	76.678	Astatotilapia_calliptera
ENSATEG00000009348	usb1	79	65.919	ENSAMXG00000040146	usb1	74	65.919	Astyanax_mexicanus
ENSATEG00000009348	usb1	99	48.214	ENSBTAG00000015758	USB1	95	50.988	Bos_taurus
ENSATEG00000009348	usb1	82	52.381	ENSCJAG00000011733	USB1	99	46.768	Callithrix_jacchus
ENSATEG00000009348	usb1	82	51.724	ENSCAFG00000008556	USB1	71	48.387	Canis_familiaris
ENSATEG00000009348	usb1	99	48.746	ENSCAFG00020009263	USB1	98	48.387	Canis_lupus_dingo
ENSATEG00000009348	usb1	99	48.571	ENSCHIG00000024290	USB1	98	48.571	Capra_hircus
ENSATEG00000009348	usb1	99	48.214	ENSTSYG00000006997	USB1	98	48.214	Carlito_syrichta
ENSATEG00000009348	usb1	79	43.750	ENSCAPG00000009057	USB1	97	43.172	Cavia_aperea
ENSATEG00000009348	usb1	99	48.571	ENSCPOG00000014325	USB1	95	50.000	Cavia_porcellus
ENSATEG00000009348	usb1	82	51.948	ENSCCAG00000022132	USB1	99	48.289	Cebus_capucinus
ENSATEG00000009348	usb1	82	53.247	ENSCATG00000032174	USB1	99	49.430	Cercocebus_atys
ENSATEG00000009348	usb1	61	53.757	ENSCLAG00000007363	USB1	87	55.556	Chinchilla_lanigera
ENSATEG00000009348	usb1	82	52.814	ENSCSAG00000004783	USB1	99	49.049	Chlorocebus_sabaeus
ENSATEG00000009348	usb1	80	56.889	ENSCPBG00000026943	USB1	98	50.350	Chrysemys_picta_bellii
ENSATEG00000009348	usb1	80	34.310	ENSCING00000011490	-	88	33.193	Ciona_intestinalis
ENSATEG00000009348	usb1	82	53.247	ENSCANG00000037135	USB1	99	49.430	Colobus_angolensis_palliatus
ENSATEG00000009348	usb1	99	49.286	ENSCGRG00001011243	USB1	98	49.286	Cricetulus_griseus_chok1gshd
ENSATEG00000009348	usb1	99	49.286	ENSCGRG00000013252	USB1	98	49.286	Cricetulus_griseus_crigri
ENSATEG00000009348	usb1	100	69.504	ENSCSEG00000013881	usb1	99	67.972	Cynoglossus_semilaevis
ENSATEG00000009348	usb1	80	75.877	ENSCVAG00000009252	usb1	98	75.877	Cyprinodon_variegatus
ENSATEG00000009348	usb1	80	62.222	ENSDARG00000003841	usb1	96	54.887	Danio_rerio
ENSATEG00000009348	usb1	84	51.695	ENSDORG00000001888	Usb1	98	49.286	Dipodomys_ordii
ENSATEG00000009348	usb1	83	39.344	FBgn0037713	CG16790	92	38.589	Drosophila_melanogaster
ENSATEG00000009348	usb1	99	41.429	ENSETEG00000019682	USB1	94	42.688	Echinops_telfairi
ENSATEG00000009348	usb1	89	40.741	ENSEBUG00000005889	usb1	89	41.634	Eptatretus_burgeri
ENSATEG00000009348	usb1	99	48.929	ENSEASG00005005484	USB1	87	52.814	Equus_asinus_asinus
ENSATEG00000009348	usb1	99	48.571	ENSECAG00000019493	USB1	80	52.381	Equus_caballus
ENSATEG00000009348	usb1	61	50.289	ENSEEUG00000000154	USB1	58	50.980	Erinaceus_europaeus
ENSATEG00000009348	usb1	89	62.451	ENSELUG00000010974	usb1	100	59.507	Esox_lucius
ENSATEG00000009348	usb1	83	52.137	ENSFCAG00000002693	USB1	95	50.198	Felis_catus
ENSATEG00000009348	usb1	82	53.846	ENSFALG00000006876	USB1	92	52.381	Ficedula_albicollis
ENSATEG00000009348	usb1	99	48.571	ENSFDAG00000010052	USB1	95	49.407	Fukomys_damarensis
ENSATEG00000009348	usb1	88	66.265	ENSFHEG00000012334	usb1	98	65.863	Fundulus_heteroclitus
ENSATEG00000009348	usb1	79	73.874	ENSGMOG00000004228	usb1	99	73.874	Gadus_morhua
ENSATEG00000009348	usb1	79	54.464	ENSGALG00000035604	USB1	94	50.800	Gallus_gallus
ENSATEG00000009348	usb1	99	72.598	ENSGAFG00000021890	usb1	99	72.598	Gambusia_affinis
ENSATEG00000009348	usb1	100	73.665	ENSGACG00000003257	usb1	100	74.021	Gasterosteus_aculeatus
ENSATEG00000009348	usb1	99	52.143	ENSGAGG00000022572	USB1	98	52.143	Gopherus_agassizii
ENSATEG00000009348	usb1	82	52.381	ENSGGOG00000017147	USB1	95	49.801	Gorilla_gorilla
ENSATEG00000009348	usb1	99	77.305	ENSHBUG00000009823	usb1	99	77.305	Haplochromis_burtoni
ENSATEG00000009348	usb1	99	48.754	ENSHGLG00000016078	USB1	85	52.381	Heterocephalus_glaber_female
ENSATEG00000009348	usb1	99	48.754	ENSHGLG00100005562	USB1	85	52.381	Heterocephalus_glaber_male
ENSATEG00000009348	usb1	77	75.576	ENSHCOG00000015633	usb1	86	76.126	Hippocampus_comes
ENSATEG00000009348	usb1	99	54.514	ENSIPUG00000008601	usb1	88	57.937	Ictalurus_punctatus
ENSATEG00000009348	usb1	99	49.466	ENSSTOG00000007548	USB1	98	49.466	Ictidomys_tridecemlineatus
ENSATEG00000009348	usb1	99	49.286	ENSJJAG00000021859	Usb1	98	48.929	Jaculus_jaculus
ENSATEG00000009348	usb1	99	69.643	ENSKMAG00000007200	usb1	99	69.643	Kryptolebias_marmoratus
ENSATEG00000009348	usb1	89	72.441	ENSLBEG00000008452	usb1	86	69.314	Labrus_bergylta
ENSATEG00000009348	usb1	86	48.980	ENSLACG00000000105	USB1	67	57.949	Latimeria_chalumnae
ENSATEG00000009348	usb1	99	52.128	ENSLOCG00000000465	usb1	100	52.650	Lepisosteus_oculatus
ENSATEG00000009348	usb1	99	40.070	ENSLAFG00000002267	USB1	86	43.777	Loxodonta_africana
ENSATEG00000009348	usb1	82	52.814	ENSMFAG00000003926	USB1	99	46.008	Macaca_fascicularis
ENSATEG00000009348	usb1	82	52.814	ENSMMUG00000022669	USB1	99	46.008	Macaca_mulatta
ENSATEG00000009348	usb1	82	52.381	ENSMNEG00000042487	USB1	99	48.669	Macaca_nemestrina
ENSATEG00000009348	usb1	82	52.814	ENSMLEG00000028756	USB1	99	46.008	Mandrillus_leucophaeus
ENSATEG00000009348	usb1	100	77.660	ENSMAMG00000015092	usb1	100	77.305	Mastacembelus_armatus
ENSATEG00000009348	usb1	99	77.305	ENSMZEG00005010008	usb1	99	77.305	Maylandia_zebra
ENSATEG00000009348	usb1	99	49.286	ENSMAUG00000007832	Usb1	95	50.198	Mesocricetus_auratus
ENSATEG00000009348	usb1	82	52.814	ENSMICG00000004900	USB1	95	50.199	Microcebus_murinus
ENSATEG00000009348	usb1	99	49.286	ENSMOCG00000022647	Usb1	95	50.988	Microtus_ochrogaster
ENSATEG00000009348	usb1	80	79.018	ENSMMOG00000000490	usb1	87	79.018	Mola_mola
ENSATEG00000009348	usb1	77	52.995	ENSMODG00000014067	USB1	89	50.201	Monodelphis_domestica
ENSATEG00000009348	usb1	99	81.851	ENSMALG00000005930	usb1	99	81.851	Monopterus_albus
ENSATEG00000009348	usb1	99	49.643	MGP_CAROLIEiJ_G0031421	Usb1	99	50.893	Mus_caroli
ENSATEG00000009348	usb1	99	49.643	ENSMUSG00000031792	Usb1	99	50.893	Mus_musculus
ENSATEG00000009348	usb1	82	53.247	MGP_PahariEiJ_G0023019	Usb1	100	52.991	Mus_pahari
ENSATEG00000009348	usb1	99	49.286	MGP_SPRETEiJ_G0032540	Usb1	95	50.593	Mus_spretus
ENSATEG00000009348	usb1	99	48.929	ENSMPUG00000004684	USB1	91	49.412	Mustela_putorius_furo
ENSATEG00000009348	usb1	82	54.113	ENSMLUG00000007400	USB1	100	54.113	Myotis_lucifugus
ENSATEG00000009348	usb1	99	49.286	ENSNGAG00000009703	Usb1	98	50.357	Nannospalax_galili
ENSATEG00000009348	usb1	99	71.986	ENSNBRG00000008747	usb1	99	77.934	Neolamprologus_brichardi
ENSATEG00000009348	usb1	75	53.302	ENSNLEG00000003340	USB1	93	50.431	Nomascus_leucogenys
ENSATEG00000009348	usb1	99	48.929	ENSODEG00000016214	USB1	91	52.049	Octodon_degus
ENSATEG00000009348	usb1	99	77.660	ENSONIG00000011063	usb1	100	77.660	Oreochromis_niloticus
ENSATEG00000009348	usb1	80	53.982	ENSOANG00000012118	USB1	95	53.982	Ornithorhynchus_anatinus
ENSATEG00000009348	usb1	92	72.201	ENSORLG00000012479	usb1	99	70.357	Oryzias_latipes
ENSATEG00000009348	usb1	93	71.538	ENSORLG00020018671	usb1	99	69.643	Oryzias_latipes_hni
ENSATEG00000009348	usb1	93	72.692	ENSORLG00015009679	usb1	99	69.643	Oryzias_latipes_hsok
ENSATEG00000009348	usb1	99	73.929	ENSOMEG00000012930	usb1	99	73.929	Oryzias_melastigma
ENSATEG00000009348	usb1	99	45.714	ENSOGAG00000003273	USB1	94	47.012	Otolemur_garnettii
ENSATEG00000009348	usb1	84	52.101	ENSOARG00000001107	USB1	91	52.101	Ovis_aries
ENSATEG00000009348	usb1	82	51.948	ENSPPAG00000042137	USB1	95	49.402	Pan_paniscus
ENSATEG00000009348	usb1	86	50.403	ENSPPRG00000024797	USB1	95	50.198	Panthera_pardus
ENSATEG00000009348	usb1	86	50.000	ENSPTIG00000007506	USB1	95	49.802	Panthera_tigris_altaica
ENSATEG00000009348	usb1	81	49.345	ENSPTRG00000008172	USB1	100	54.206	Pan_troglodytes
ENSATEG00000009348	usb1	82	52.814	ENSPANG00000025138	USB1	99	46.008	Papio_anubis
ENSATEG00000009348	usb1	80	64.444	ENSPKIG00000015109	usb1	99	55.705	Paramormyrops_kingsleyae
ENSATEG00000009348	usb1	79	46.053	ENSPSIG00000004305	USB1	100	46.053	Pelodiscus_sinensis
ENSATEG00000009348	usb1	80	67.411	ENSPMGG00000017725	usb1	86	67.411	Periophthalmus_magnuspinnatus
ENSATEG00000009348	usb1	99	48.929	ENSPEMG00000016183	Usb1	98	48.929	Peromyscus_maniculatus_bairdii
ENSATEG00000009348	usb1	79	50.000	ENSPMAG00000000462	usb1	95	50.000	Petromyzon_marinus
ENSATEG00000009348	usb1	99	72.598	ENSPFOG00000011130	usb1	99	72.598	Poecilia_formosa
ENSATEG00000009348	usb1	99	72.242	ENSPLAG00000009820	usb1	99	72.242	Poecilia_latipinna
ENSATEG00000009348	usb1	99	72.954	ENSPMEG00000006402	usb1	99	72.954	Poecilia_mexicana
ENSATEG00000009348	usb1	88	71.888	ENSPREG00000001047	usb1	99	73.092	Poecilia_reticulata
ENSATEG00000009348	usb1	75	51.174	ENSPPYG00000007401	USB1	92	48.498	Pongo_abelii
ENSATEG00000009348	usb1	82	51.948	ENSPCOG00000022612	USB1	95	49.402	Propithecus_coquereli
ENSATEG00000009348	usb1	99	47.500	ENSPVAG00000004613	USB1	95	49.798	Pteropus_vampyrus
ENSATEG00000009348	usb1	99	77.305	ENSPNYG00000022262	usb1	99	77.305	Pundamilia_nyererei
ENSATEG00000009348	usb1	80	64.444	ENSPNAG00000011736	usb1	77	64.444	Pygocentrus_nattereri
ENSATEG00000009348	usb1	99	49.286	ENSRNOG00000013216	Usb1	95	50.593	Rattus_norvegicus
ENSATEG00000009348	usb1	82	49.351	ENSRBIG00000044466	USB1	100	54.673	Rhinopithecus_bieti
ENSATEG00000009348	usb1	82	52.814	ENSRROG00000029211	USB1	99	46.008	Rhinopithecus_roxellana
ENSATEG00000009348	usb1	82	52.381	ENSSBOG00000029362	USB1	95	49.801	Saimiri_boliviensis_boliviensis
ENSATEG00000009348	usb1	77	50.459	ENSSHAG00000006993	USB1	99	49.206	Sarcophilus_harrisii
ENSATEG00000009348	usb1	90	60.078	ENSSFOG00015023663	usb1	91	58.333	Scleropages_formosus
ENSATEG00000009348	usb1	99	72.727	ENSSMAG00000015834	usb1	99	72.449	Scophthalmus_maximus
ENSATEG00000009348	usb1	79	85.650	ENSSDUG00000002949	usb1	99	75.532	Seriola_dumerili
ENSATEG00000009348	usb1	99	81.429	ENSSLDG00000014174	usb1	99	81.429	Seriola_lalandi_dorsalis
ENSATEG00000009348	usb1	76	54.673	ENSSPUG00000006741	USB1	100	54.673	Sphenodon_punctatus
ENSATEG00000009348	usb1	100	75.352	ENSSPAG00000007484	usb1	100	76.056	Stegastes_partitus
ENSATEG00000009348	usb1	84	51.681	ENSSSCG00000002807	USB1	88	51.681	Sus_scrofa
ENSATEG00000009348	usb1	75	56.132	ENSTGUG00000004792	USB1	93	51.587	Taeniopygia_guttata
ENSATEG00000009348	usb1	100	69.395	ENSTRUG00000021069	usb1	100	66.192	Takifugu_rubripes
ENSATEG00000009348	usb1	100	60.854	ENSTNIG00000000626	usb1	84	68.304	Tetraodon_nigroviridis
ENSATEG00000009348	usb1	82	36.364	ENSTBEG00000001507	USB1	99	36.364	Tupaia_belangeri
ENSATEG00000009348	usb1	86	52.049	ENSUAMG00000016823	USB1	98	50.000	Ursus_americanus
ENSATEG00000009348	usb1	76	55.140	ENSUMAG00000021369	USB1	100	55.140	Ursus_maritimus
ENSATEG00000009348	usb1	82	51.724	ENSVVUG00000023700	USB1	89	52.174	Vulpes_vulpes
ENSATEG00000009348	usb1	77	54.378	ENSXETG00000013795	usb1	90	54.222	Xenopus_tropicalis
ENSATEG00000009348	usb1	89	74.603	ENSXMAG00000024687	usb1	81	72.400	Xiphophorus_maculatus