EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000009752 (Gene tree)
Gene ID: 113171652
Gene Symbol: xrn1
Alias: wu:fk92c07|zgc:63635
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 16012 bases
Position: chrOOHO01000003.1:21587270-21603281
Accession: ZDB-GENE-040426-1203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000014156	XRN_N	PF03159.18	3.5e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000014385	-	4608	-	ENSATEP00000014156	1535 (aa)	-	-

Gene Model

Click here to download ENSATEG00000009752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000009752's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000009752	xrn1	99	70.714	ENSG00000114127	XRN1	96	95.146	Homo_sapiens
ENSATEG00000009752	xrn1	100	81.942	ENSAPOG00000000622	xrn1	100	82.411	Acanthochromis_polyacanthus
ENSATEG00000009752	xrn1	96	70.863	ENSAMEG00000012538	XRN1	91	70.952	Ailuropoda_melanoleuca
ENSATEG00000009752	xrn1	99	85.781	ENSACIG00000001057	xrn1	99	80.762	Amphilophus_citrinellus
ENSATEG00000009752	xrn1	100	84.806	ENSAOCG00000014097	xrn1	95	84.651	Amphiprion_ocellaris
ENSATEG00000009752	xrn1	99	85.837	ENSAPEG00000006620	xrn1	100	85.681	Amphiprion_percula
ENSATEG00000009752	xrn1	97	70.598	ENSAPLG00000004905	XRN1	91	69.628	Anas_platyrhynchos
ENSATEG00000009752	xrn1	100	68.361	ENSACAG00000004985	XRN1	96	68.437	Anolis_carolinensis
ENSATEG00000009752	xrn1	99	71.372	ENSANAG00000029013	XRN1	99	72.359	Aotus_nancymaae
ENSATEG00000009752	xrn1	99	85.536	ENSACLG00000004806	xrn1	98	85.379	Astatotilapia_calliptera
ENSATEG00000009752	xrn1	100	73.395	ENSAMXG00000019370	xrn1	95	97.087	Astyanax_mexicanus
ENSATEG00000009752	xrn1	99	70.714	ENSBTAG00000011524	XRN1	95	70.804	Bos_taurus
ENSATEG00000009752	xrn1	76	36.782	WBGene00012730	xrn-1	72	61.732	Caenorhabditis_elegans
ENSATEG00000009752	xrn1	100	71.190	ENSCJAG00000001872	XRN1	95	71.122	Callithrix_jacchus
ENSATEG00000009752	xrn1	96	71.667	ENSCAFG00000007783	XRN1	94	71.292	Canis_familiaris
ENSATEG00000009752	xrn1	96	71.667	ENSCAFG00020009120	XRN1	99	77.060	Canis_lupus_dingo
ENSATEG00000009752	xrn1	99	70.658	ENSCHIG00000019192	XRN1	92	70.883	Capra_hircus
ENSATEG00000009752	xrn1	99	70.691	ENSTSYG00000002705	XRN1	94	70.963	Carlito_syrichta
ENSATEG00000009752	xrn1	60	66.496	ENSCAPG00000004604	-	99	66.609	Cavia_aperea
ENSATEG00000009752	xrn1	99	71.429	ENSCCAG00000034800	XRN1	99	76.115	Cebus_capucinus
ENSATEG00000009752	xrn1	97	71.270	ENSCATG00000041794	XRN1	94	71.201	Cercocebus_atys
ENSATEG00000009752	xrn1	100	69.225	ENSCLAG00000001451	XRN1	99	76.190	Chinchilla_lanigera
ENSATEG00000009752	xrn1	97	71.429	ENSCSAG00000011265	XRN1	94	71.360	Chlorocebus_sabaeus
ENSATEG00000009752	xrn1	58	93.506	ENSCHOG00000013961	-	51	93.506	Choloepus_hoffmanni
ENSATEG00000009752	xrn1	76	48.904	ENSCSAVG00000008584	-	94	49.055	Ciona_savignyi
ENSATEG00000009752	xrn1	97	71.190	ENSCANG00000037495	XRN1	99	76.115	Colobus_angolensis_palliatus
ENSATEG00000009752	xrn1	96	70.695	ENSCGRG00001019411	Xrn1	99	76.592	Cricetulus_griseus_chok1gshd
ENSATEG00000009752	xrn1	96	70.695	ENSCGRG00000012464	Xrn1	99	76.592	Cricetulus_griseus_crigri
ENSATEG00000009752	xrn1	99	75.692	ENSCSEG00000021285	xrn1	94	98.077	Cynoglossus_semilaevis
ENSATEG00000009752	xrn1	72	82.935	ENSCVAG00000013089	xrn1	99	82.935	Cyprinodon_variegatus
ENSATEG00000009752	xrn1	100	77.484	ENSDARG00000091652	xrn1	98	78.992	Danio_rerio
ENSATEG00000009752	xrn1	97	71.009	ENSDORG00000013833	Xrn1	94	71.201	Dipodomys_ordii
ENSATEG00000009752	xrn1	81	38.073	FBgn0020261	pcm	78	38.303	Drosophila_melanogaster
ENSATEG00000009752	xrn1	84	68.468	ENSETEG00000003978	XRN1	82	68.595	Echinops_telfairi
ENSATEG00000009752	xrn1	98	71.009	ENSEASG00005002687	XRN1	99	76.115	Equus_asinus_asinus
ENSATEG00000009752	xrn1	98	70.929	ENSECAG00000008301	XRN1	94	70.883	Equus_caballus
ENSATEG00000009752	xrn1	84	78.534	ENSEEUG00000011323	XRN1	81	78.534	Erinaceus_europaeus
ENSATEG00000009752	xrn1	100	74.814	ENSELUG00000000169	xrn1	97	75.205	Esox_lucius
ENSATEG00000009752	xrn1	96	67.340	ENSFCAG00000027589	XRN1	99	76.149	Felis_catus
ENSATEG00000009752	xrn1	100	69.565	ENSFALG00000007021	XRN1	95	69.767	Ficedula_albicollis
ENSATEG00000009752	xrn1	100	68.213	ENSFDAG00000020494	XRN1	99	76.032	Fukomys_damarensis
ENSATEG00000009752	xrn1	91	72.600	ENSGMOG00000006396	xrn1	84	73.339	Gadus_morhua
ENSATEG00000009752	xrn1	100	67.578	ENSGALG00000002706	XRN1	98	67.556	Gallus_gallus
ENSATEG00000009752	xrn1	99	84.889	ENSGACG00000014328	xrn1	95	84.889	Gasterosteus_aculeatus
ENSATEG00000009752	xrn1	95	67.562	ENSGAGG00000017535	XRN1	98	67.562	Gopherus_agassizii
ENSATEG00000009752	xrn1	99	70.952	ENSGGOG00000008047	XRN1	94	70.963	Gorilla_gorilla
ENSATEG00000009752	xrn1	99	86.109	ENSHBUG00000005908	xrn1	97	86.109	Haplochromis_burtoni
ENSATEG00000009752	xrn1	99	71.349	ENSHGLG00000014476	XRN1	99	76.190	Heterocephalus_glaber_female
ENSATEG00000009752	xrn1	99	71.349	ENSHGLG00100015130	XRN1	99	76.190	Heterocephalus_glaber_male
ENSATEG00000009752	xrn1	100	73.632	ENSHCOG00000014062	xrn1	99	73.632	Hippocampus_comes
ENSATEG00000009752	xrn1	99	76.168	ENSIPUG00000015229	xrn1	96	76.090	Ictalurus_punctatus
ENSATEG00000009752	xrn1	99	71.168	ENSSTOG00000013552	XRN1	99	75.637	Ictidomys_tridecemlineatus
ENSATEG00000009752	xrn1	97	69.837	ENSJJAG00000010863	Xrn1	99	75.124	Jaculus_jaculus
ENSATEG00000009752	xrn1	100	73.357	ENSKMAG00000021356	xrn1	95	78.692	Kryptolebias_marmoratus
ENSATEG00000009752	xrn1	99	82.160	ENSLBEG00000018656	xrn1	97	99.029	Labrus_bergylta
ENSATEG00000009752	xrn1	99	70.830	ENSLACG00000009020	XRN1	92	70.830	Latimeria_chalumnae
ENSATEG00000009752	xrn1	99	74.491	ENSLOCG00000007944	xrn1	96	72.975	Lepisosteus_oculatus
ENSATEG00000009752	xrn1	67	71.671	ENSLAFG00000015426	XRN1	99	71.001	Loxodonta_africana
ENSATEG00000009752	xrn1	97	71.247	ENSMFAG00000032599	XRN1	94	71.281	Macaca_fascicularis
ENSATEG00000009752	xrn1	97	71.349	ENSMMUG00000014038	XRN1	94	71.281	Macaca_mulatta
ENSATEG00000009752	xrn1	97	71.281	ENSMNEG00000034217	XRN1	94	70.644	Macaca_nemestrina
ENSATEG00000009752	xrn1	100	81.938	ENSMAMG00000013219	xrn1	99	81.938	Mastacembelus_armatus
ENSATEG00000009752	xrn1	99	85.614	ENSMZEG00005015099	xrn1	98	85.457	Maylandia_zebra
ENSATEG00000009752	xrn1	99	67.075	ENSMGAG00000006333	XRN1	99	67.051	Meleagris_gallopavo
ENSATEG00000009752	xrn1	97	71.019	ENSMICG00000048948	XRN1	96	95.146	Microcebus_murinus
ENSATEG00000009752	xrn1	61	76.424	ENSMOCG00000008665	Xrn1	99	76.190	Microtus_ochrogaster
ENSATEG00000009752	xrn1	100	68.650	ENSMODG00000021236	XRN1	95	68.345	Monodelphis_domestica
ENSATEG00000009752	xrn1	100	72.258	ENSMALG00000004098	xrn1	100	73.166	Monopterus_albus
ENSATEG00000009752	xrn1	95	76.349	MGP_CAROLIEiJ_G0032535	Xrn1	100	92.500	Mus_caroli
ENSATEG00000009752	xrn1	100	68.072	ENSMUSG00000032410	Xrn1	100	92.500	Mus_musculus
ENSATEG00000009752	xrn1	99	70.883	MGP_PahariEiJ_G0015404	Xrn1	100	92.500	Mus_pahari
ENSATEG00000009752	xrn1	99	70.827	MGP_SPRETEiJ_G0033678	Xrn1	100	92.500	Mus_spretus
ENSATEG00000009752	xrn1	98	71.838	ENSMPUG00000012040	XRN1	95	71.838	Mustela_putorius_furo
ENSATEG00000009752	xrn1	100	69.397	ENSMLUG00000016885	XRN1	94	69.326	Myotis_lucifugus
ENSATEG00000009752	xrn1	61	71.949	ENSNGAG00000023964	Xrn1	99	71.746	Nannospalax_galili
ENSATEG00000009752	xrn1	100	69.636	ENSNLEG00000004726	XRN1	96	69.720	Nomascus_leucogenys
ENSATEG00000009752	xrn1	71	95.876	ENSMEUG00000014473	-	67	96.117	Notamacropus_eugenii
ENSATEG00000009752	xrn1	68	67.883	ENSOPRG00000007337	-	63	67.883	Ochotona_princeps
ENSATEG00000009752	xrn1	99	86.936	ENSONIG00000016673	xrn1	96	86.936	Oreochromis_niloticus
ENSATEG00000009752	xrn1	91	66.411	ENSOANG00000006735	XRN1	99	63.347	Ornithorhynchus_anatinus
ENSATEG00000009752	xrn1	99	71.360	ENSOCUG00000001861	XRN1	92	70.565	Oryctolagus_cuniculus
ENSATEG00000009752	xrn1	99	82.884	ENSORLG00000013005	xrn1	98	82.694	Oryzias_latipes
ENSATEG00000009752	xrn1	99	82.459	ENSORLG00020005559	xrn1	98	82.459	Oryzias_latipes_hni
ENSATEG00000009752	xrn1	100	74.630	ENSORLG00015022523	xrn1	100	74.630	Oryzias_latipes_hsok
ENSATEG00000009752	xrn1	100	78.500	ENSOMEG00000015397	xrn1	100	78.562	Oryzias_melastigma
ENSATEG00000009752	xrn1	100	67.312	ENSOGAG00000000170	XRN1	95	67.339	Otolemur_garnettii
ENSATEG00000009752	xrn1	99	70.761	ENSOARG00000006343	XRN1	94	70.747	Ovis_aries
ENSATEG00000009752	xrn1	99	71.111	ENSPPAG00000010180	XRN1	94	71.122	Pan_paniscus
ENSATEG00000009752	xrn1	95	71.157	ENSPPRG00000007125	XRN1	94	71.463	Panthera_pardus
ENSATEG00000009752	xrn1	96	71.293	ENSPTIG00000021081	XRN1	94	71.463	Panthera_tigris_altaica
ENSATEG00000009752	xrn1	99	71.111	ENSPTRG00000015482	XRN1	94	71.122	Pan_troglodytes
ENSATEG00000009752	xrn1	99	71.349	ENSPANG00000010638	XRN1	94	71.281	Papio_anubis
ENSATEG00000009752	xrn1	99	70.268	ENSPSIG00000018050	XRN1	91	70.426	Pelodiscus_sinensis
ENSATEG00000009752	xrn1	61	83.728	ENSPMGG00000002648	xrn1	99	84.036	Periophthalmus_magnuspinnatus
ENSATEG00000009752	xrn1	61	76.349	ENSPEMG00000020610	Xrn1	99	76.274	Peromyscus_maniculatus_bairdii
ENSATEG00000009752	xrn1	67	72.779	ENSPMAG00000002975	xrn1	90	72.779	Petromyzon_marinus
ENSATEG00000009752	xrn1	100	68.674	ENSPCIG00000028735	XRN1	99	76.070	Phascolarctos_cinereus
ENSATEG00000009752	xrn1	91	83.229	ENSPFOG00000013932	xrn1	97	83.333	Poecilia_formosa
ENSATEG00000009752	xrn1	91	83.661	ENSPLAG00000021653	xrn1	97	83.661	Poecilia_latipinna
ENSATEG00000009752	xrn1	88	83.150	ENSPMEG00000003076	xrn1	92	83.307	Poecilia_mexicana
ENSATEG00000009752	xrn1	99	82.537	ENSPREG00000021147	xrn1	98	82.850	Poecilia_reticulata
ENSATEG00000009752	xrn1	99	71.032	ENSPPYG00000014172	XRN1	94	70.963	Pongo_abelii
ENSATEG00000009752	xrn1	83	75.365	ENSPCAG00000005638	XRN1	86	76.642	Procavia_capensis
ENSATEG00000009752	xrn1	97	69.457	ENSPCOG00000013089	XRN1	99	75.796	Propithecus_coquereli
ENSATEG00000009752	xrn1	90	69.775	ENSPVAG00000016265	XRN1	88	69.775	Pteropus_vampyrus
ENSATEG00000009752	xrn1	99	85.557	ENSPNYG00000010570	xrn1	97	85.400	Pundamilia_nyererei
ENSATEG00000009752	xrn1	100	70.772	ENSPNAG00000023531	xrn1	98	70.772	Pygocentrus_nattereri
ENSATEG00000009752	xrn1	100	70.929	ENSRNOG00000042951	Xrn1	93	70.963	Rattus_norvegicus
ENSATEG00000009752	xrn1	97	71.111	ENSRBIG00000041227	XRN1	94	71.122	Rhinopithecus_bieti
ENSATEG00000009752	xrn1	76	33.051	YGL173C	XRN1	74	49.745	Saccharomyces_cerevisiae
ENSATEG00000009752	xrn1	100	71.485	ENSSBOG00000029561	XRN1	95	71.440	Saimiri_boliviensis_boliviensis
ENSATEG00000009752	xrn1	98	68.196	ENSSHAG00000016207	XRN1	95	68.097	Sarcophilus_harrisii
ENSATEG00000009752	xrn1	100	65.788	ENSSFOG00015024211	xrn1	100	66.128	Scleropages_formosus
ENSATEG00000009752	xrn1	100	83.972	ENSSMAG00000016534	xrn1	100	81.773	Scophthalmus_maximus
ENSATEG00000009752	xrn1	100	77.326	ENSSDUG00000010306	xrn1	100	77.326	Seriola_dumerili
ENSATEG00000009752	xrn1	100	85.400	ENSSLDG00000021543	xrn1	100	85.400	Seriola_lalandi_dorsalis
ENSATEG00000009752	xrn1	66	66.117	ENSSARG00000007741	-	75	66.117	Sorex_araneus
ENSATEG00000009752	xrn1	100	71.486	ENSTGUG00000008498	XRN1	95	71.691	Taeniopygia_guttata
ENSATEG00000009752	xrn1	99	79.718	ENSTRUG00000004895	xrn1	96	80.171	Takifugu_rubripes
ENSATEG00000009752	xrn1	99	78.802	ENSTNIG00000017615	xrn1	95	78.752	Tetraodon_nigroviridis
ENSATEG00000009752	xrn1	76	79.625	ENSTBEG00000003256	XRN1	83	69.219	Tupaia_belangeri
ENSATEG00000009752	xrn1	99	69.206	ENSTTRG00000012914	XRN1	94	69.133	Tursiops_truncatus
ENSATEG00000009752	xrn1	99	69.444	ENSUAMG00000001608	XRN1	99	72.611	Ursus_americanus
ENSATEG00000009752	xrn1	99	71.190	ENSUMAG00000013625	XRN1	94	71.281	Ursus_maritimus
ENSATEG00000009752	xrn1	97	68.496	ENSVPAG00000004690	XRN1	90	68.656	Vicugna_pacos
ENSATEG00000009752	xrn1	95	71.667	ENSVVUG00000024461	XRN1	99	76.592	Vulpes_vulpes
ENSATEG00000009752	xrn1	99	70.710	ENSXETG00000000619	xrn1	99	80.366	Xenopus_tropicalis
ENSATEG00000009752	xrn1	100	73.353	ENSXCOG00000007917	xrn1	100	73.653	Xiphophorus_couchianus
ENSATEG00000009752	xrn1	100	76.870	ENSXMAG00000018320	xrn1	100	77.009	Xiphophorus_maculatus