EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000010555 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 46409 bases
Position: chrOOHO01000014.1:15443969-15490377
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000015323	PPR	PF01535.20	5e-29	1	4
ENSATEP00000015323	PPR	PF01535.20	5e-29	2	4
ENSATEP00000015323	PPR	PF01535.20	5e-29	3	4
ENSATEP00000015323	PPR	PF01535.20	5e-29	4	4
ENSATEP00000015348	PPR	PF01535.20	4.2e-14	1	2
ENSATEP00000015348	PPR	PF01535.20	4.2e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000015590	-	1383	-	ENSATEP00000015348	460 (aa)	-	-
ENSATET00000015564	-	3702	-	ENSATEP00000015323	1233 (aa)	-	-

Gene Model

Click here to download ENSATEG00000010555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000010555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000010555	lrpprc	97	71.961	ENSAPOG00000016610	lrpprc	92	71.961	Acanthochromis_polyacanthus
ENSATEG00000010555	lrpprc	93	60.088	ENSAMEG00000005852	LRPPRC	89	60.088	Ailuropoda_melanoleuca
ENSATEG00000010555	lrpprc	95	75.899	ENSACIG00000009604	lrpprc	99	61.029	Amphilophus_citrinellus
ENSATEG00000010555	lrpprc	95	73.093	ENSAOCG00000005886	lrpprc	100	58.873	Amphiprion_ocellaris
ENSATEG00000010555	lrpprc	95	74.720	ENSAPEG00000002937	lrpprc	100	65.721	Amphiprion_percula
ENSATEG00000010555	lrpprc	93	63.229	ENSACAG00000029278	LRPPRC	91	58.812	Anolis_carolinensis
ENSATEG00000010555	lrpprc	95	59.870	ENSANAG00000027440	LRPPRC	93	58.317	Aotus_nancymaae
ENSATEG00000010555	lrpprc	96	74.403	ENSACLG00000023712	lrpprc	92	78.319	Astatotilapia_calliptera
ENSATEG00000010555	lrpprc	95	59.529	ENSAMXG00000004245	-	95	58.893	Astyanax_mexicanus
ENSATEG00000010555	lrpprc	95	58.568	ENSCJAG00000000794	LRPPRC	93	57.114	Callithrix_jacchus
ENSATEG00000010555	lrpprc	96	58.531	ENSCHIG00000020173	LRPPRC	89	60.722	Capra_hircus
ENSATEG00000010555	lrpprc	95	43.994	ENSCAPG00000013631	LRPPRC	97	44.075	Cavia_aperea
ENSATEG00000010555	lrpprc	83	58.842	ENSCPOG00000000204	LRPPRC	90	58.842	Cavia_porcellus
ENSATEG00000010555	lrpprc	95	60.087	ENSCCAG00000031900	LRPPRC	93	58.717	Cebus_capucinus
ENSATEG00000010555	lrpprc	94	60.526	ENSCATG00000014187	LRPPRC	93	57.515	Cercocebus_atys
ENSATEG00000010555	lrpprc	98	55.865	ENSCLAG00000005203	LRPPRC	92	55.865	Chinchilla_lanigera
ENSATEG00000010555	lrpprc	94	60.088	ENSCSAG00000013233	LRPPRC	88	60.088	Chlorocebus_sabaeus
ENSATEG00000010555	lrpprc	95	58.009	ENSCHOG00000003631	LRPPRC	76	56.768	Choloepus_hoffmanni
ENSATEG00000010555	lrpprc	87	63.682	ENSCANG00000034961	LRPPRC	99	61.372	Colobus_angolensis_palliatus
ENSATEG00000010555	lrpprc	98	55.489	ENSCGRG00001016261	Lrpprc	92	55.533	Cricetulus_griseus_chok1gshd
ENSATEG00000010555	lrpprc	98	55.489	ENSCGRG00000004072	Lrpprc	92	55.533	Cricetulus_griseus_crigri
ENSATEG00000010555	lrpprc	96	59.603	ENSCSEG00000003850	lrpprc	97	59.063	Cynoglossus_semilaevis
ENSATEG00000010555	lrpprc	100	72.157	ENSCVAG00000012967	lrpprc	100	72.157	Cyprinodon_variegatus
ENSATEG00000010555	lrpprc	97	58.494	ENSDARG00000043970	lrpprc	90	58.494	Danio_rerio
ENSATEG00000010555	lrpprc	95	50.790	ENSDNOG00000032336	-	98	39.273	Dasypus_novemcinctus
ENSATEG00000010555	lrpprc	95	57.484	ENSDNOG00000012594	-	91	56.112	Dasypus_novemcinctus
ENSATEG00000010555	lrpprc	95	59.912	ENSDORG00000012233	Lrpprc	92	57.000	Dipodomys_ordii
ENSATEG00000010555	lrpprc	98	56.000	ENSETEG00000006657	LRPPRC	92	57.028	Echinops_telfairi
ENSATEG00000010555	lrpprc	95	54.670	ENSEEUG00000012340	LRPPRC	80	54.670	Erinaceus_europaeus
ENSATEG00000010555	lrpprc	92	68.810	ENSELUG00000012803	lrpprc	99	55.486	Esox_lucius
ENSATEG00000010555	lrpprc	95	60.000	ENSFCAG00000013468	LRPPRC	91	58.517	Felis_catus
ENSATEG00000010555	lrpprc	93	57.753	ENSFALG00000012738	LRPPRC	90	57.753	Ficedula_albicollis
ENSATEG00000010555	lrpprc	95	57.602	ENSFDAG00000015328	LRPPRC	92	56.112	Fukomys_damarensis
ENSATEG00000010555	lrpprc	100	72.157	ENSFHEG00000019604	lrpprc	100	72.157	Fundulus_heteroclitus
ENSATEG00000010555	lrpprc	95	73.258	ENSGMOG00000008337	lrpprc	100	53.739	Gadus_morhua
ENSATEG00000010555	lrpprc	99	71.947	ENSGAFG00000001455	lrpprc	99	73.333	Gambusia_affinis
ENSATEG00000010555	lrpprc	97	75.000	ENSGACG00000010679	lrpprc	91	77.149	Gasterosteus_aculeatus
ENSATEG00000010555	lrpprc	87	63.210	ENSGGOG00000041704	-	99	63.457	Gorilla_gorilla
ENSATEG00000010555	lrpprc	98	74.364	ENSHBUG00000000393	lrpprc	98	74.364	Haplochromis_burtoni
ENSATEG00000010555	lrpprc	95	55.745	ENSHGLG00000006123	LRPPRC	91	54.134	Heterocephalus_glaber_female
ENSATEG00000010555	lrpprc	58	46.313	ENSHGLG00100005960	-	93	46.313	Heterocephalus_glaber_male
ENSATEG00000010555	lrpprc	95	71.941	ENSHCOG00000002107	lrpprc	92	70.898	Hippocampus_comes
ENSATEG00000010555	lrpprc	97	61.538	ENSIPUG00000009406	lrpprc	91	64.453	Ictalurus_punctatus
ENSATEG00000010555	lrpprc	95	58.478	ENSSTOG00000011185	LRPPRC	91	56.426	Ictidomys_tridecemlineatus
ENSATEG00000010555	lrpprc	95	57.466	ENSJJAG00000020475	Lrpprc	92	53.862	Jaculus_jaculus
ENSATEG00000010555	lrpprc	95	71.365	ENSKMAG00000003287	lrpprc	75	71.365	Kryptolebias_marmoratus
ENSATEG00000010555	lrpprc	95	76.222	ENSLBEG00000023225	lrpprc	96	75.256	Labrus_bergylta
ENSATEG00000010555	lrpprc	95	61.194	ENSLACG00000014030	LRPPRC	93	59.608	Latimeria_chalumnae
ENSATEG00000010555	lrpprc	95	65.208	ENSLOCG00000016390	lrpprc	90	64.054	Lepisosteus_oculatus
ENSATEG00000010555	lrpprc	93	60.417	ENSLAFG00000008614	LRPPRC	86	60.417	Loxodonta_africana
ENSATEG00000010555	lrpprc	94	60.307	ENSMFAG00000041560	LRPPRC	99	61.011	Macaca_fascicularis
ENSATEG00000010555	lrpprc	91	63.415	ENSMMUG00000019841	LRPPRC	99	61.011	Macaca_mulatta
ENSATEG00000010555	lrpprc	94	60.088	ENSMNEG00000031613	LRPPRC	93	57.114	Macaca_nemestrina
ENSATEG00000010555	lrpprc	95	76.652	ENSMAMG00000021835	lrpprc	91	72.901	Mastacembelus_armatus
ENSATEG00000010555	lrpprc	100	74.168	ENSMZEG00005027379	lrpprc	99	74.168	Maylandia_zebra
ENSATEG00000010555	lrpprc	95	61.765	ENSMAUG00000012118	Lrpprc	92	61.765	Mesocricetus_auratus
ENSATEG00000010555	lrpprc	95	57.267	ENSMICG00000010486	LRPPRC	93	55.311	Microcebus_murinus
ENSATEG00000010555	lrpprc	98	56.426	ENSMOCG00000006048	Lrpprc	93	56.426	Microtus_ochrogaster
ENSATEG00000010555	lrpprc	96	73.019	ENSMMOG00000007830	lrpprc	94	72.530	Mola_mola
ENSATEG00000010555	lrpprc	94	60.579	ENSMODG00000000648	LRPPRC	91	60.579	Monodelphis_domestica
ENSATEG00000010555	lrpprc	95	71.036	ENSMALG00000001271	lrpprc	91	70.841	Monopterus_albus
ENSATEG00000010555	lrpprc	95	58.785	ENSMPUG00000011800	LRPPRC	91	57.515	Mustela_putorius_furo
ENSATEG00000010555	lrpprc	96	59.091	ENSMLUG00000010575	LRPPRC	91	56.914	Myotis_lucifugus
ENSATEG00000010555	lrpprc	98	55.600	ENSNGAG00000013069	Lrpprc	92	55.600	Nannospalax_galili
ENSATEG00000010555	lrpprc	97	77.925	ENSNBRG00000013202	lrpprc	92	78.747	Neolamprologus_brichardi
ENSATEG00000010555	lrpprc	98	56.914	ENSNLEG00000016782	LRPPRC	93	56.914	Nomascus_leucogenys
ENSATEG00000010555	lrpprc	80	61.778	ENSOPRG00000016774	LRPPRC	79	61.778	Ochotona_princeps
ENSATEG00000010555	lrpprc	98	55.711	ENSODEG00000011211	LRPPRC	92	55.711	Octodon_degus
ENSATEG00000010555	lrpprc	100	74.364	ENSONIG00000000917	lrpprc	100	73.600	Oreochromis_niloticus
ENSATEG00000010555	lrpprc	50	68.936	ENSOANG00000000807	-	91	69.231	Ornithorhynchus_anatinus
ENSATEG00000010555	lrpprc	97	56.713	ENSOCUG00000015046	LRPPRC	87	56.713	Oryctolagus_cuniculus
ENSATEG00000010555	lrpprc	95	74.773	ENSORLG00000004605	lrpprc	100	65.123	Oryzias_latipes
ENSATEG00000010555	lrpprc	90	75.969	ENSORLG00020012536	lrpprc	90	76.111	Oryzias_latipes_hni
ENSATEG00000010555	lrpprc	95	77.727	ENSORLG00015018270	lrpprc	92	76.858	Oryzias_latipes_hsok
ENSATEG00000010555	lrpprc	95	75.497	ENSOMEG00000011863	-	97	74.593	Oryzias_melastigma
ENSATEG00000010555	lrpprc	98	54.930	ENSOGAG00000012798	LRPPRC	92	55.020	Otolemur_garnettii
ENSATEG00000010555	lrpprc	95	60.722	ENSOARG00000006522	LRPPRC	92	56.262	Ovis_aries
ENSATEG00000010555	lrpprc	98	56.262	ENSPPAG00000040876	LRPPRC	93	56.687	Pan_paniscus
ENSATEG00000010555	lrpprc	95	60.000	ENSPPRG00000006578	LRPPRC	91	58.517	Panthera_pardus
ENSATEG00000010555	lrpprc	94	60.879	ENSPTIG00000000933	LRPPRC	88	60.879	Panthera_tigris_altaica
ENSATEG00000010555	lrpprc	98	56.800	ENSPTRG00000011880	LRPPRC	93	56.800	Pan_troglodytes
ENSATEG00000010555	lrpprc	94	60.088	ENSPANG00000020731	LRPPRC	93	57.114	Papio_anubis
ENSATEG00000010555	lrpprc	95	56.774	ENSPKIG00000022232	lrpprc	97	55.952	Paramormyrops_kingsleyae
ENSATEG00000010555	lrpprc	59	49.937	ENSPSIG00000006830	-	91	50.315	Pelodiscus_sinensis
ENSATEG00000010555	lrpprc	50	54.286	ENSPSIG00000015672	-	88	62.147	Pelodiscus_sinensis
ENSATEG00000010555	lrpprc	64	59.314	ENSPMGG00000016597	lrpprc	97	59.314	Periophthalmus_magnuspinnatus
ENSATEG00000010555	lrpprc	95	71.274	ENSPMGG00000013171	-	95	71.490	Periophthalmus_magnuspinnatus
ENSATEG00000010555	lrpprc	93	58.531	ENSPMAG00000002147	lrpprc	92	58.531	Petromyzon_marinus
ENSATEG00000010555	lrpprc	96	73.597	ENSPFOG00000011227	lrpprc	91	74.486	Poecilia_formosa
ENSATEG00000010555	lrpprc	98	71.374	ENSPLAG00000004018	lrpprc	91	72.745	Poecilia_latipinna
ENSATEG00000010555	lrpprc	98	71.374	ENSPMEG00000016425	lrpprc	91	72.745	Poecilia_mexicana
ENSATEG00000010555	lrpprc	98	70.992	ENSPREG00000003662	lrpprc	91	72.353	Poecilia_reticulata
ENSATEG00000010555	lrpprc	59	46.827	ENSPPYG00000029532	-	98	46.827	Pongo_abelii
ENSATEG00000010555	lrpprc	95	58.658	ENSPCAG00000001430	LRPPRC	79	57.426	Procavia_capensis
ENSATEG00000010555	lrpprc	90	61.575	ENSPVAG00000002007	LRPPRC	88	56.313	Pteropus_vampyrus
ENSATEG00000010555	lrpprc	96	75.492	ENSPNYG00000000756	lrpprc	93	73.566	Pundamilia_nyererei
ENSATEG00000010555	lrpprc	99	64.615	ENSPNAG00000002895	lrpprc	99	53.749	Pygocentrus_nattereri
ENSATEG00000010555	lrpprc	93	59.955	ENSRNOG00000005877	Lrpprc	87	59.955	Rattus_norvegicus
ENSATEG00000010555	lrpprc	94	60.088	ENSRBIG00000031552	LRPPRC	91	57.114	Rhinopithecus_bieti
ENSATEG00000010555	lrpprc	90	61.962	ENSRROG00000042793	-	93	57.315	Rhinopithecus_roxellana
ENSATEG00000010555	lrpprc	95	59.219	ENSSBOG00000011807	LRPPRC	93	57.800	Saimiri_boliviensis_boliviensis
ENSATEG00000010555	lrpprc	95	59.234	ENSSHAG00000018725	LRPPRC	91	59.234	Sarcophilus_harrisii
ENSATEG00000010555	lrpprc	97	54.776	ENSSFOG00015001042	lrpprc	91	54.776	Scleropages_formosus
ENSATEG00000010555	lrpprc	98	67.249	ENSSMAG00000016811	-	99	67.828	Scophthalmus_maximus
ENSATEG00000010555	lrpprc	97	73.333	ENSSDUG00000019062	lrpprc	91	73.137	Seriola_dumerili
ENSATEG00000010555	lrpprc	100	60.599	ENSSLDG00000023028	lrpprc	100	54.456	Seriola_lalandi_dorsalis
ENSATEG00000010555	lrpprc	81	61.680	ENSSARG00000000426	LRPPRC	85	61.680	Sorex_araneus
ENSATEG00000010555	lrpprc	99	66.985	ENSSPAG00000000162	lrpprc	92	67.969	Stegastes_partitus
ENSATEG00000010555	lrpprc	96	59.307	ENSSSCG00000008452	LRPPRC	91	57.315	Sus_scrofa
ENSATEG00000010555	lrpprc	92	59.712	ENSTGUG00000003759	LRPPRC	91	59.712	Taeniopygia_guttata
ENSATEG00000010555	lrpprc	95	71.915	ENSTRUG00000008409	lrpprc	96	59.612	Takifugu_rubripes
ENSATEG00000010555	lrpprc	95	71.991	ENSTNIG00000007470	lrpprc	100	58.000	Tetraodon_nigroviridis
ENSATEG00000010555	lrpprc	95	59.389	ENSTTRG00000006403	LRPPRC	88	59.389	Tursiops_truncatus
ENSATEG00000010555	lrpprc	90	63.119	ENSVPAG00000008993	LRPPRC	87	63.119	Vicugna_pacos
ENSATEG00000010555	lrpprc	98	63.778	ENSXETG00000009296	lrpprc	92	61.554	Xenopus_tropicalis
ENSATEG00000010555	lrpprc	95	73.636	ENSXCOG00000013343	lrpprc	95	71.933	Xiphophorus_couchianus
ENSATEG00000010555	lrpprc	97	72.353	ENSXMAG00000018108	lrpprc	91	72.353	Xiphophorus_maculatus