EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000010676 (Gene tree)
Gene ID: 113147916
Gene Symbol: chd1
Alias: fc26h11|fk85d05|si:dkey-106m21.4|wu:fc26h11|wu:fk85d05|zgc:173506
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 34403 bases
Position: chrOOHO01000007.1:20748854-20783256
Accession: 113147916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000015534	ResIII	PF04851.15	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000015733	-	7107	XM_026339243	ENSATEP00000015489	1790 (aa)	XP_026195028	UPI000E45C35E
ENSATET00000015777	-	4917	-	ENSATEP00000015534	1638 (aa)	-	-

Gene Model

Click here to download ENSATEG00000010676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000010676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000010676	chd1	87	59.352	ENSATEG00000005246	chd2	89	56.919

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000010676	chd1	70	93.086	ENSAPOG00000005764	chd1	98	92.987	Acanthochromis_polyacanthus
ENSATEG00000010676	chd1	90	91.661	ENSAOCG00000023105	chd1	94	91.328	Amphiprion_ocellaris
ENSATEG00000010676	chd1	90	92.867	ENSAPEG00000013544	chd1	94	92.533	Amphiprion_percula
ENSATEG00000010676	chd1	55	78.771	ENSCPBG00000015831	CHD1	88	78.667	Chrysemys_picta_bellii
ENSATEG00000010676	chd1	92	75.884	ENSCANG00000036916	CHD1	90	75.417	Colobus_angolensis_palliatus
ENSATEG00000010676	chd1	90	87.808	ENSCSEG00000009553	chd1	95	88.141	Cynoglossus_semilaevis
ENSATEG00000010676	chd1	71	81.106	ENSEASG00005016110	CHD1	97	74.935	Equus_asinus_asinus
ENSATEG00000010676	chd1	91	84.469	ENSELUG00000017677	chd1	93	84.197	Esox_lucius
ENSATEG00000010676	chd1	75	90.546	ENSFHEG00000021164	chd1	89	90.367	Fundulus_heteroclitus
ENSATEG00000010676	chd1	92	87.886	ENSGMOG00000001537	chd1	86	87.950	Gadus_morhua
ENSATEG00000010676	chd1	93	75.174	ENSGALG00000031327	-	94	75.831	Gallus_gallus
ENSATEG00000010676	chd1	86	81.720	ENSGAFG00000019880	chd1	89	93.125	Gambusia_affinis
ENSATEG00000010676	chd1	92	74.807	ENSGGOG00000011463	CHD1	90	73.829	Gorilla_gorilla
ENSATEG00000010676	chd1	90	89.774	ENSHCOG00000014222	chd1	93	90.106	Hippocampus_comes
ENSATEG00000010676	chd1	89	85.887	ENSIPUG00000001369	chd1	96	82.020	Ictalurus_punctatus
ENSATEG00000010676	chd1	55	81.518	ENSLAFG00000023183	CHD1	84	81.518	Loxodonta_africana
ENSATEG00000010676	chd1	92	77.814	ENSMFAG00000031226	CHD1	91	77.165	Macaca_fascicularis
ENSATEG00000010676	chd1	92	77.814	ENSMNEG00000045073	CHD1	91	77.165	Macaca_nemestrina
ENSATEG00000010676	chd1	92	73.458	ENSMLEG00000041096	CHD1	90	73.715	Mandrillus_leucophaeus
ENSATEG00000010676	chd1	92	75.145	ENSMOCG00000019121	Chd1	90	75.403	Microtus_ochrogaster
ENSATEG00000010676	chd1	84	88.850	ENSMALG00000013317	chd1	99	83.100	Monopterus_albus
ENSATEG00000010676	chd1	63	74.238	MGP_CAROLIEiJ_G0021099	Chd1	90	76.814	Mus_caroli
ENSATEG00000010676	chd1	90	89.205	ENSNBRG00000006860	chd1	93	89.051	Neolamprologus_brichardi
ENSATEG00000010676	chd1	92	76.038	ENSNLEG00000014493	CHD1	90	75.463	Nomascus_leucogenys
ENSATEG00000010676	chd1	97	73.353	ENSOANG00000004891	CHD1	100	77.977	Ornithorhynchus_anatinus
ENSATEG00000010676	chd1	92	76.633	ENSPPAG00000043367	CHD1	91	76.200	Pan_paniscus
ENSATEG00000010676	chd1	92	77.878	ENSPTRG00000017103	CHD1	90	77.299	Pan_troglodytes
ENSATEG00000010676	chd1	92	77.814	ENSPANG00000006387	CHD1	91	77.165	Papio_anubis
ENSATEG00000010676	chd1	90	77.792	ENSPKIG00000024719	chd1	92	78.655	Paramormyrops_kingsleyae
ENSATEG00000010676	chd1	76	90.647	ENSPMGG00000005785	chd1	93	90.256	Periophthalmus_magnuspinnatus
ENSATEG00000010676	chd1	51	83.871	ENSPLAG00000006473	-	88	83.852	Poecilia_latipinna
ENSATEG00000010676	chd1	98	84.505	ENSPREG00000004209	chd1	97	85.099	Poecilia_reticulata
ENSATEG00000010676	chd1	92	75.979	ENSRBIG00000044325	CHD1	90	75.787	Rhinopithecus_bieti
ENSATEG00000010676	chd1	76	83.933	ENSSFOG00015007161	chd1	90	85.621	Scleropages_formosus
ENSATEG00000010676	chd1	80	91.131	ENSSDUG00000018314	chd1	87	94.489	Seriola_dumerili
ENSATEG00000010676	chd1	59	89.969	ENSSLDG00000017244	chd1	88	96.132	Seriola_lalandi_dorsalis
ENSATEG00000010676	chd1	82	90.288	ENSSPAG00000007024	chd1	95	91.549	Stegastes_partitus
ENSATEG00000010676	chd1	72	86.125	ENSTNIG00000007101	chd1	95	85.961	Tetraodon_nigroviridis
ENSATEG00000010676	chd1	96	80.629	ENSXCOG00000017184	chd1	97	79.950	Xiphophorus_couchianus
ENSATEG00000010676	chd1	81	85.147	ENSXMAG00000014538	chd1	97	86.767	Xiphophorus_maculatus