EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000010844 (Gene tree)
Gene ID: 113157978
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 84622 bases
Position: chrOOHO01000014.1:15756053-15840674
Accession: 113157978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000015622	S1	PF00575.23	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000015905	-	3983	-	ENSATEP00000015662	919 (aa)	-	-
ENSATET00000015865	-	3756	XM_026353607	ENSATEP00000015622	998 (aa)	XP_026209392	UPI000E45C210
ENSATET00000015844	-	2917	-	ENSATEP00000015601	926 (aa)	-	-

Gene Model

Click here to download ENSATEG00000010844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000010844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000010844	si:ch211-117n7.8	97	52.376	ENSG00000068784	SRBD1	98	52.048	Homo_sapiens
ENSATEG00000010844	si:ch211-117n7.8	100	78.474	ENSAPOG00000005103	si:ch211-117n7.8	100	77.984	Acanthochromis_polyacanthus
ENSATEG00000010844	si:ch211-117n7.8	84	58.442	ENSAMEG00000005993	SRBD1	84	58.442	Ailuropoda_melanoleuca
ENSATEG00000010844	si:ch211-117n7.8	97	80.586	ENSACIG00000009875	si:ch211-117n7.8	100	80.890	Amphilophus_citrinellus
ENSATEG00000010844	si:ch211-117n7.8	100	77.081	ENSAOCG00000024718	si:ch211-117n7.8	100	77.081	Amphiprion_ocellaris
ENSATEG00000010844	si:ch211-117n7.8	97	77.744	ENSAPEG00000002645	si:ch211-117n7.8	100	77.744	Amphiprion_percula
ENSATEG00000010844	si:ch211-117n7.8	95	54.816	ENSAPLG00000006313	SRBD1	85	58.891	Anas_platyrhynchos
ENSATEG00000010844	si:ch211-117n7.8	97	51.980	ENSANAG00000025573	SRBD1	99	51.282	Aotus_nancymaae
ENSATEG00000010844	si:ch211-117n7.8	100	81.293	ENSACLG00000024219	si:ch211-117n7.8	100	81.293	Astatotilapia_calliptera
ENSATEG00000010844	si:ch211-117n7.8	100	63.343	ENSAMXG00000004294	SRBD1	100	63.992	Astyanax_mexicanus
ENSATEG00000010844	si:ch211-117n7.8	84	57.951	ENSBTAG00000007508	SRBD1	99	49.902	Bos_taurus
ENSATEG00000010844	si:ch211-117n7.8	97	52.187	ENSCJAG00000000727	SRBD1	98	51.700	Callithrix_jacchus
ENSATEG00000010844	si:ch211-117n7.8	84	57.661	ENSCAFG00000002554	SRBD1	84	57.661	Canis_familiaris
ENSATEG00000010844	si:ch211-117n7.8	84	58.592	ENSCAFG00020026284	SRBD1	97	58.592	Canis_lupus_dingo
ENSATEG00000010844	si:ch211-117n7.8	84	58.068	ENSCHIG00000016535	SRBD1	82	58.068	Capra_hircus
ENSATEG00000010844	si:ch211-117n7.8	97	51.964	ENSTSYG00000012797	SRBD1	99	52.136	Carlito_syrichta
ENSATEG00000010844	si:ch211-117n7.8	99	52.295	ENSCPOG00000004773	SRBD1	85	57.042	Cavia_porcellus
ENSATEG00000010844	si:ch211-117n7.8	97	52.284	ENSCCAG00000025589	SRBD1	98	52.056	Cebus_capucinus
ENSATEG00000010844	si:ch211-117n7.8	97	52.487	ENSCATG00000039530	SRBD1	99	51.677	Cercocebus_atys
ENSATEG00000010844	si:ch211-117n7.8	98	52.823	ENSCLAG00000008623	SRBD1	88	56.705	Chinchilla_lanigera
ENSATEG00000010844	si:ch211-117n7.8	97	52.487	ENSCSAG00000013350	SRBD1	99	51.677	Chlorocebus_sabaeus
ENSATEG00000010844	si:ch211-117n7.8	71	69.388	ENSCHOG00000003805	SRBD1	70	69.388	Choloepus_hoffmanni
ENSATEG00000010844	si:ch211-117n7.8	87	57.305	ENSCPBG00000005677	SRBD1	98	53.916	Chrysemys_picta_bellii
ENSATEG00000010844	si:ch211-117n7.8	79	40.200	ENSCING00000005950	-	99	40.200	Ciona_intestinalis
ENSATEG00000010844	si:ch211-117n7.8	79	42.497	ENSCSAVG00000000861	-	99	42.497	Ciona_savignyi
ENSATEG00000010844	si:ch211-117n7.8	97	52.284	ENSCANG00000016307	SRBD1	89	54.995	Colobus_angolensis_palliatus
ENSATEG00000010844	si:ch211-117n7.8	84	58.145	ENSCGRG00001000513	Srbd1	84	58.145	Cricetulus_griseus_chok1gshd
ENSATEG00000010844	si:ch211-117n7.8	84	58.145	ENSCGRG00000002283	Srbd1	84	58.145	Cricetulus_griseus_crigri
ENSATEG00000010844	si:ch211-117n7.8	100	72.944	ENSCSEG00000000856	si:ch211-117n7.8	100	72.989	Cynoglossus_semilaevis
ENSATEG00000010844	si:ch211-117n7.8	98	75.380	ENSCVAG00000020212	si:ch211-117n7.8	99	75.612	Cyprinodon_variegatus
ENSATEG00000010844	si:ch211-117n7.8	99	51.362	ENSDNOG00000018686	SRBD1	99	51.014	Dasypus_novemcinctus
ENSATEG00000010844	si:ch211-117n7.8	98	52.457	ENSDORG00000010468	Srbd1	84	57.926	Dipodomys_ordii
ENSATEG00000010844	si:ch211-117n7.8	89	32.893	FBgn0051156	CG31156	91	33.223	Drosophila_melanogaster
ENSATEG00000010844	si:ch211-117n7.8	74	57.664	ENSETEG00000000739	SRBD1	77	57.923	Echinops_telfairi
ENSATEG00000010844	si:ch211-117n7.8	73	48.760	ENSEBUG00000008902	si:ch211-117n7.8	95	48.760	Eptatretus_burgeri
ENSATEG00000010844	si:ch211-117n7.8	84	56.537	ENSEASG00005003132	SRBD1	98	58.647	Equus_asinus_asinus
ENSATEG00000010844	si:ch211-117n7.8	84	58.284	ENSECAG00000013865	SRBD1	82	58.284	Equus_caballus
ENSATEG00000010844	si:ch211-117n7.8	100	65.355	ENSELUG00000012592	si:ch211-117n7.8	100	65.096	Esox_lucius
ENSATEG00000010844	si:ch211-117n7.8	85	57.488	ENSFCAG00000005101	SRBD1	99	51.938	Felis_catus
ENSATEG00000010844	si:ch211-117n7.8	85	57.394	ENSFALG00000012966	SRBD1	99	51.683	Ficedula_albicollis
ENSATEG00000010844	si:ch211-117n7.8	98	53.360	ENSFDAG00000016670	SRBD1	85	58.244	Fukomys_damarensis
ENSATEG00000010844	si:ch211-117n7.8	100	77.028	ENSFHEG00000019480	si:ch211-117n7.8	100	75.734	Fundulus_heteroclitus
ENSATEG00000010844	si:ch211-117n7.8	50	71.596	ENSGMOG00000018010	-	100	71.596	Gadus_morhua
ENSATEG00000010844	si:ch211-117n7.8	85	58.864	ENSGALG00000009990	SRBD1	86	58.864	Gallus_gallus
ENSATEG00000010844	si:ch211-117n7.8	100	76.703	ENSGAFG00000019664	si:ch211-117n7.8	100	76.505	Gambusia_affinis
ENSATEG00000010844	si:ch211-117n7.8	63	82.481	ENSGACG00000010794	si:ch211-117n7.8	100	82.481	Gasterosteus_aculeatus
ENSATEG00000010844	si:ch211-117n7.8	83	58.977	ENSGAGG00000006166	SRBD1	99	58.977	Gopherus_agassizii
ENSATEG00000010844	si:ch211-117n7.8	97	52.669	ENSGGOG00000005910	SRBD1	86	57.562	Gorilla_gorilla
ENSATEG00000010844	si:ch211-117n7.8	97	67.659	ENSHBUG00000013207	si:ch211-117n7.8	100	67.556	Haplochromis_burtoni
ENSATEG00000010844	si:ch211-117n7.8	99	52.131	ENSHGLG00000018153	-	84	58.126	Heterocephalus_glaber_female
ENSATEG00000010844	si:ch211-117n7.8	99	52.131	ENSHGLG00100015183	-	84	58.126	Heterocephalus_glaber_male
ENSATEG00000010844	si:ch211-117n7.8	94	65.328	ENSIPUG00000009661	srbd1	100	63.781	Ictalurus_punctatus
ENSATEG00000010844	si:ch211-117n7.8	99	52.579	ENSSTOG00000005898	SRBD1	84	59.118	Ictidomys_tridecemlineatus
ENSATEG00000010844	si:ch211-117n7.8	99	49.656	ENSJJAG00000022244	Srbd1	99	49.214	Jaculus_jaculus
ENSATEG00000010844	si:ch211-117n7.8	99	79.249	ENSKMAG00000003473	si:ch211-117n7.8	100	79.051	Kryptolebias_marmoratus
ENSATEG00000010844	si:ch211-117n7.8	100	79.686	ENSLBEG00000027518	si:ch211-117n7.8	100	79.686	Labrus_bergylta
ENSATEG00000010844	si:ch211-117n7.8	84	58.235	ENSLACG00000009790	SRBD1	99	58.235	Latimeria_chalumnae
ENSATEG00000010844	si:ch211-117n7.8	96	61.685	ENSLOCG00000016360	si:ch211-117n7.8	99	60.683	Lepisosteus_oculatus
ENSATEG00000010844	si:ch211-117n7.8	97	52.487	ENSMFAG00000042026	SRBD1	99	51.677	Macaca_fascicularis
ENSATEG00000010844	si:ch211-117n7.8	97	52.487	ENSMMUG00000003490	SRBD1	98	52.156	Macaca_mulatta
ENSATEG00000010844	si:ch211-117n7.8	97	51.012	ENSMNEG00000034701	SRBD1	99	50.246	Macaca_nemestrina
ENSATEG00000010844	si:ch211-117n7.8	97	52.589	ENSMLEG00000000745	SRBD1	99	51.775	Mandrillus_leucophaeus
ENSATEG00000010844	si:ch211-117n7.8	100	81.169	ENSMAMG00000021921	si:ch211-117n7.8	100	81.169	Mastacembelus_armatus
ENSATEG00000010844	si:ch211-117n7.8	100	81.391	ENSMZEG00005027369	si:ch211-117n7.8	100	81.391	Maylandia_zebra
ENSATEG00000010844	si:ch211-117n7.8	80	56.914	ENSMGAG00000010273	SRBD1	99	56.914	Meleagris_gallopavo
ENSATEG00000010844	si:ch211-117n7.8	78	56.720	ENSMAUG00000013916	Srbd1	95	56.720	Mesocricetus_auratus
ENSATEG00000010844	si:ch211-117n7.8	84	58.167	ENSMICG00000007835	SRBD1	84	58.167	Microcebus_murinus
ENSATEG00000010844	si:ch211-117n7.8	98	52.156	ENSMOCG00000018716	Srbd1	84	57.500	Microtus_ochrogaster
ENSATEG00000010844	si:ch211-117n7.8	97	78.314	ENSMMOG00000007507	si:ch211-117n7.8	100	78.314	Mola_mola
ENSATEG00000010844	si:ch211-117n7.8	100	81.809	ENSMALG00000001562	si:ch211-117n7.8	100	81.809	Monopterus_albus
ENSATEG00000010844	si:ch211-117n7.8	85	57.227	MGP_CAROLIEiJ_G0021934	Srbd1	99	59.211	Mus_caroli
ENSATEG00000010844	si:ch211-117n7.8	85	57.227	ENSMUSG00000024135	Srbd1	98	57.949	Mus_musculus
ENSATEG00000010844	si:ch211-117n7.8	85	56.757	MGP_PahariEiJ_G0020924	Srbd1	85	56.757	Mus_pahari
ENSATEG00000010844	si:ch211-117n7.8	85	57.109	MGP_SPRETEiJ_G0022850	Srbd1	85	57.109	Mus_spretus
ENSATEG00000010844	si:ch211-117n7.8	84	57.629	ENSMLUG00000007039	SRBD1	84	57.629	Myotis_lucifugus
ENSATEG00000010844	si:ch211-117n7.8	98	50.929	ENSNGAG00000011893	Srbd1	84	55.785	Nannospalax_galili
ENSATEG00000010844	si:ch211-117n7.8	98	78.521	ENSNBRG00000012873	si:ch211-117n7.8	100	78.521	Neolamprologus_brichardi
ENSATEG00000010844	si:ch211-117n7.8	84	57.327	ENSNLEG00000016877	SRBD1	84	57.327	Nomascus_leucogenys
ENSATEG00000010844	si:ch211-117n7.8	84	57.857	ENSODEG00000012095	SRBD1	85	57.857	Octodon_degus
ENSATEG00000010844	si:ch211-117n7.8	100	82.111	ENSONIG00000000945	si:ch211-117n7.8	100	84.588	Oreochromis_niloticus
ENSATEG00000010844	si:ch211-117n7.8	99	52.268	ENSOCUG00000015385	SRBD1	99	51.855	Oryctolagus_cuniculus
ENSATEG00000010844	si:ch211-117n7.8	100	71.261	ENSORLG00000004427	si:ch211-117n7.8	100	70.968	Oryzias_latipes
ENSATEG00000010844	si:ch211-117n7.8	100	74.146	ENSORLG00020012792	si:ch211-117n7.8	100	73.854	Oryzias_latipes_hni
ENSATEG00000010844	si:ch211-117n7.8	100	74.316	ENSORLG00015018598	si:ch211-117n7.8	100	74.023	Oryzias_latipes_hsok
ENSATEG00000010844	si:ch211-117n7.8	99	72.370	ENSOMEG00000012229	si:ch211-117n7.8	99	79.167	Oryzias_melastigma
ENSATEG00000010844	si:ch211-117n7.8	84	56.169	ENSOGAG00000001076	SRBD1	84	56.169	Otolemur_garnettii
ENSATEG00000010844	si:ch211-117n7.8	84	53.959	ENSOARG00000005958	SRBD1	99	48.414	Ovis_aries
ENSATEG00000010844	si:ch211-117n7.8	84	57.210	ENSPPAG00000038442	SRBD1	84	57.210	Pan_paniscus
ENSATEG00000010844	si:ch211-117n7.8	86	57.290	ENSPPRG00000003449	SRBD1	99	51.973	Panthera_pardus
ENSATEG00000010844	si:ch211-117n7.8	86	57.290	ENSPTIG00000012495	SRBD1	86	57.290	Panthera_tigris_altaica
ENSATEG00000010844	si:ch211-117n7.8	84	57.444	ENSPTRG00000011889	SRBD1	84	57.444	Pan_troglodytes
ENSATEG00000010844	si:ch211-117n7.8	97	52.487	ENSPANG00000008063	SRBD1	99	51.677	Papio_anubis
ENSATEG00000010844	si:ch211-117n7.8	99	61.834	ENSPKIG00000021973	si:ch211-117n7.8	99	61.797	Paramormyrops_kingsleyae
ENSATEG00000010844	si:ch211-117n7.8	85	58.083	ENSPSIG00000008992	SRBD1	99	51.985	Pelodiscus_sinensis
ENSATEG00000010844	si:ch211-117n7.8	98	72.681	ENSPMGG00000013348	si:ch211-117n7.8	99	72.525	Periophthalmus_magnuspinnatus
ENSATEG00000010844	si:ch211-117n7.8	98	50.829	ENSPEMG00000020684	Srbd1	84	56.214	Peromyscus_maniculatus_bairdii
ENSATEG00000010844	si:ch211-117n7.8	100	77.887	ENSPFOG00000010650	si:ch211-117n7.8	100	77.887	Poecilia_formosa
ENSATEG00000010844	si:ch211-117n7.8	100	77.986	ENSPLAG00000002141	si:ch211-117n7.8	100	77.986	Poecilia_latipinna
ENSATEG00000010844	si:ch211-117n7.8	100	77.887	ENSPMEG00000018537	si:ch211-117n7.8	100	77.887	Poecilia_mexicana
ENSATEG00000010844	si:ch211-117n7.8	100	76.096	ENSPREG00000003258	si:ch211-117n7.8	100	76.096	Poecilia_reticulata
ENSATEG00000010844	si:ch211-117n7.8	97	49.146	ENSPPYG00000012444	SRBD1	97	49.105	Pongo_abelii
ENSATEG00000010844	si:ch211-117n7.8	76	53.088	ENSPCAG00000005629	SRBD1	80	53.088	Procavia_capensis
ENSATEG00000010844	si:ch211-117n7.8	84	48.894	ENSPCOG00000017669	SRBD1	83	48.894	Propithecus_coquereli
ENSATEG00000010844	si:ch211-117n7.8	84	51.061	ENSPVAG00000001782	SRBD1	84	51.061	Pteropus_vampyrus
ENSATEG00000010844	si:ch211-117n7.8	97	75.334	ENSPNYG00000000508	si:ch211-117n7.8	100	75.334	Pundamilia_nyererei
ENSATEG00000010844	si:ch211-117n7.8	95	66.841	ENSPNAG00000013492	SRBD1	100	64.356	Pygocentrus_nattereri
ENSATEG00000010844	si:ch211-117n7.8	85	56.404	ENSRNOG00000014720	Srbd1	85	56.404	Rattus_norvegicus
ENSATEG00000010844	si:ch211-117n7.8	97	52.081	ENSRBIG00000033486	SRBD1	98	51.397	Rhinopithecus_bieti
ENSATEG00000010844	si:ch211-117n7.8	97	52.081	ENSRROG00000041599	SRBD1	98	51.397	Rhinopithecus_roxellana
ENSATEG00000010844	si:ch211-117n7.8	97	52.024	ENSSBOG00000024982	SRBD1	99	51.581	Saimiri_boliviensis_boliviensis
ENSATEG00000010844	si:ch211-117n7.8	86	65.323	ENSSFOG00015001128	si:ch211-117n7.8	94	65.323	Scleropages_formosus
ENSATEG00000010844	si:ch211-117n7.8	100	80.293	ENSSMAG00000018256	si:ch211-117n7.8	100	80.293	Scophthalmus_maximus
ENSATEG00000010844	si:ch211-117n7.8	97	81.046	ENSSLDG00000023189	si:ch211-117n7.8	100	81.540	Seriola_lalandi_dorsalis
ENSATEG00000010844	si:ch211-117n7.8	84	53.491	ENSSARG00000009740	SRBD1	85	53.491	Sorex_araneus
ENSATEG00000010844	si:ch211-117n7.8	85	59.694	ENSSPUG00000010475	SRBD1	99	55.183	Sphenodon_punctatus
ENSATEG00000010844	si:ch211-117n7.8	93	78.503	ENSSPAG00000008092	-	100	76.271	Stegastes_partitus
ENSATEG00000010844	si:ch211-117n7.8	84	58.099	ENSSSCG00000008445	SRBD1	98	51.741	Sus_scrofa
ENSATEG00000010844	si:ch211-117n7.8	83	58.670	ENSTGUG00000003878	SRBD1	99	58.670	Taeniopygia_guttata
ENSATEG00000010844	si:ch211-117n7.8	99	73.807	ENSTRUG00000007080	si:ch211-117n7.8	99	78.414	Takifugu_rubripes
ENSATEG00000010844	si:ch211-117n7.8	98	72.808	ENSTNIG00000007464	si:ch211-117n7.8	98	72.485	Tetraodon_nigroviridis
ENSATEG00000010844	si:ch211-117n7.8	65	81.915	ENSTBEG00000004556	SRBD1	63	81.915	Tupaia_belangeri
ENSATEG00000010844	si:ch211-117n7.8	78	58.844	ENSTTRG00000011871	SRBD1	76	58.844	Tursiops_truncatus
ENSATEG00000010844	si:ch211-117n7.8	84	58.167	ENSUAMG00000008126	SRBD1	97	56.115	Ursus_americanus
ENSATEG00000010844	si:ch211-117n7.8	84	58.167	ENSUMAG00000012902	SRBD1	83	58.167	Ursus_maritimus
ENSATEG00000010844	si:ch211-117n7.8	84	57.327	ENSVPAG00000006825	SRBD1	92	57.327	Vicugna_pacos
ENSATEG00000010844	si:ch211-117n7.8	97	52.781	ENSVVUG00000005389	SRBD1	99	51.855	Vulpes_vulpes
ENSATEG00000010844	si:ch211-117n7.8	98	45.821	ENSXETG00000002760	srbd1	98	45.663	Xenopus_tropicalis
ENSATEG00000010844	si:ch211-117n7.8	100	77.591	ENSXMAG00000016861	si:ch211-117n7.8	100	77.591	Xiphophorus_maculatus