EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000011040 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 16523 bases
Position: chrOOHO01000015.1:8074027-8090549
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000015874	MMR_HSR1	PF01926.23	8.8e-11	1	1
ENSATEP00000015871	MMR_HSR1	PF01926.23	1.2e-09	1	1
ENSATEP00000015861	MMR_HSR1	PF01926.23	1.5e-09	1	1
ENSATEP00000015864	MMR_HSR1	PF01926.23	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000016126	-	2831	-	ENSATEP00000015874	709 (aa)	-	-
ENSATET00000016116	-	4972	-	ENSATEP00000015864	1121 (aa)	-	-
ENSATET00000016123	-	5165	-	ENSATEP00000015871	1226 (aa)	-	-
ENSATET00000016111	-	4981	-	ENSATEP00000015861	1124 (aa)	-	-

Gene Model

Click here to download ENSATEG00000011040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000011040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000011040	-	50	55.858	ENSATEG00000010901	-	95	57.951
ENSATEG00000011040	-	56	30.380	ENSATEG00000010770	si:ch211-219a4.3	53	30.380
ENSATEG00000011040	-	50	53.672	ENSATEG00000011021	-	95	56.160

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000011040	-	75	60.409	ENSAPOG00000000444	-	91	60.668	Acanthochromis_polyacanthus
ENSATEG00000011040	-	74	58.523	ENSACLG00000001777	-	100	58.412	Astatotilapia_calliptera
ENSATEG00000011040	-	63	56.541	ENSACLG00000001800	-	98	56.541	Astatotilapia_calliptera
ENSATEG00000011040	-	79	59.858	ENSACLG00000001833	-	96	64.530	Astatotilapia_calliptera
ENSATEG00000011040	-	61	47.335	ENSCSEG00000020077	-	87	49.706	Cynoglossus_semilaevis
ENSATEG00000011040	-	50	48.596	ENSCVAG00000009934	-	96	50.284	Cyprinodon_variegatus
ENSATEG00000011040	-	99	55.326	ENSCVAG00000003284	-	77	65.482	Cyprinodon_variegatus
ENSATEG00000011040	-	50	55.899	ENSFHEG00000010623	-	97	54.424	Fundulus_heteroclitus
ENSATEG00000011040	-	90	50.072	ENSFHEG00000010603	-	98	48.609	Fundulus_heteroclitus
ENSATEG00000011040	-	90	48.489	ENSFHEG00000010614	-	99	47.969	Fundulus_heteroclitus
ENSATEG00000011040	-	50	42.365	ENSGAFG00000006141	-	90	41.337	Gambusia_affinis
ENSATEG00000011040	-	79	54.211	ENSGAFG00000006087	-	98	65.641	Gambusia_affinis
ENSATEG00000011040	-	99	56.583	ENSHBUG00000015375	-	99	59.583	Haplochromis_burtoni
ENSATEG00000011040	-	78	57.473	ENSHBUG00000018072	-	99	64.957	Haplochromis_burtoni
ENSATEG00000011040	-	100	51.965	ENSKMAG00000011735	-	93	58.562	Kryptolebias_marmoratus
ENSATEG00000011040	-	50	55.464	ENSKMAG00000014098	-	92	55.914	Kryptolebias_marmoratus
ENSATEG00000011040	-	100	61.815	ENSLBEG00000015796	-	99	59.250	Labrus_bergylta
ENSATEG00000011040	-	51	65.556	ENSMAMG00000013255	-	99	66.205	Mastacembelus_armatus
ENSATEG00000011040	-	100	62.304	ENSMAMG00000013245	-	99	52.719	Mastacembelus_armatus
ENSATEG00000011040	-	50	54.301	ENSMAMG00000013290	-	94	55.946	Mastacembelus_armatus
ENSATEG00000011040	-	68	56.364	ENSMAMG00000013262	-	96	60.909	Mastacembelus_armatus
ENSATEG00000011040	-	51	58.496	ENSMZEG00005020600	-	96	58.496	Maylandia_zebra
ENSATEG00000011040	-	50	58.380	ENSMZEG00005020592	-	99	57.778	Maylandia_zebra
ENSATEG00000011040	-	50	53.760	ENSMZEG00005020576	-	92	54.596	Maylandia_zebra
ENSATEG00000011040	-	77	58.318	ENSMZEG00005020584	-	100	58.318	Maylandia_zebra
ENSATEG00000011040	-	50	55.899	ENSNBRG00000005554	-	99	55.899	Neolamprologus_brichardi
ENSATEG00000011040	-	63	58.057	ENSNBRG00000005577	-	99	58.057	Neolamprologus_brichardi
ENSATEG00000011040	-	63	53.977	ENSORLG00000026065	-	92	64.088	Oryzias_latipes
ENSATEG00000011040	-	51	44.722	ENSORLG00020017380	-	97	45.787	Oryzias_latipes_hni
ENSATEG00000011040	-	78	50.082	ENSORLG00020017362	-	76	60.382	Oryzias_latipes_hni
ENSATEG00000011040	-	65	55.858	ENSORLG00020017391	-	99	52.911	Oryzias_latipes_hni
ENSATEG00000011040	-	54	60.105	ENSORLG00015018216	-	94	60.051	Oryzias_latipes_hsok
ENSATEG00000011040	-	67	55.228	ENSORLG00015018247	-	97	55.228	Oryzias_latipes_hsok
ENSATEG00000011040	-	77	53.747	ENSOMEG00000018412	-	79	53.747	Oryzias_melastigma
ENSATEG00000011040	-	50	52.809	ENSOMEG00000018453	-	89	52.809	Oryzias_melastigma
ENSATEG00000011040	-	81	56.735	ENSOMEG00000018335	-	84	55.516	Oryzias_melastigma
ENSATEG00000011040	-	50	55.738	ENSPFOG00000020090	-	83	57.260	Poecilia_formosa
ENSATEG00000011040	-	50	55.738	ENSPLAG00000002595	-	91	57.260	Poecilia_latipinna
ENSATEG00000011040	-	73	54.269	ENSPLAG00000023261	-	98	54.545	Poecilia_latipinna
ENSATEG00000011040	-	50	44.652	ENSPMEG00000008974	-	96	44.652	Poecilia_mexicana
ENSATEG00000011040	-	70	57.312	ENSPMEG00000009099	-	95	66.842	Poecilia_mexicana
ENSATEG00000011040	-	94	54.464	ENSPMEG00000009067	-	82	57.471	Poecilia_mexicana
ENSATEG00000011040	-	50	56.425	ENSPREG00000006778	-	98	57.263	Poecilia_reticulata
ENSATEG00000011040	-	79	55.179	ENSPREG00000006740	-	75	55.179	Poecilia_reticulata
ENSATEG00000011040	-	53	51.538	ENSPREG00000008166	-	99	47.872	Poecilia_reticulata
ENSATEG00000011040	-	50	55.464	ENSPREG00000008226	-	91	56.164	Poecilia_reticulata
ENSATEG00000011040	-	50	44.568	ENSPNAG00000018629	-	91	45.404	Pygocentrus_nattereri
ENSATEG00000011040	-	99	64.865	ENSSMAG00000003569	-	99	64.865	Scophthalmus_maximus
ENSATEG00000011040	-	89	83.010	ENSSDUG00000001451	-	97	83.010	Seriola_dumerili
ENSATEG00000011040	-	50	55.367	ENSSDUG00000023612	-	95	55.367	Seriola_dumerili
ENSATEG00000011040	-	50	53.672	ENSSLDG00000005632	-	96	54.520	Seriola_lalandi_dorsalis
ENSATEG00000011040	-	96	52.439	ENSXMAG00000028779	-	99	60.680	Xiphophorus_maculatus
ENSATEG00000011040	-	50	54.596	ENSXMAG00000021016	-	90	54.596	Xiphophorus_maculatus