EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000011097 (Gene tree)
Gene ID: 113153984
Gene Symbol: cpsf1
Alias: wu:fb24c01
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 14767 bases
Position: chrOOHO01000017.1:43133796-43148562
Accession: 113153984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000016146	CPSF_A	PF03178.15	4.8e-92	1	1
ENSATEP00000016103	CPSF_A	PF03178.15	7.8e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000016399	-	6350	-	ENSATEP00000016146	1474 (aa)	XP_026203717	UPI000E4586EF
ENSATET00000016356	-	6450	-	ENSATEP00000016103	1435 (aa)	-	-

Gene Model

Click here to download ENSATEG00000011097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000011097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000011097	cpsf1	100	77.815	ENSG00000071894	CPSF1	100	80.093	Homo_sapiens
ENSATEG00000011097	cpsf1	100	94.912	ENSAPOG00000019621	cpsf1	100	94.369	Acanthochromis_polyacanthus
ENSATEG00000011097	cpsf1	99	76.928	ENSAMEG00000005557	CPSF1	98	77.080	Ailuropoda_melanoleuca
ENSATEG00000011097	cpsf1	100	89.317	ENSACIG00000006112	cpsf1	100	89.114	Amphilophus_citrinellus
ENSATEG00000011097	cpsf1	100	90.897	ENSAOCG00000007120	cpsf1	100	90.762	Amphiprion_ocellaris
ENSATEG00000011097	cpsf1	100	91.976	ENSAPEG00000005755	cpsf1	100	91.976	Amphiprion_percula
ENSATEG00000011097	cpsf1	93	74.366	ENSACAG00000009655	CPSF1	100	73.986	Anolis_carolinensis
ENSATEG00000011097	cpsf1	100	78.018	ENSANAG00000036514	CPSF1	100	77.815	Aotus_nancymaae
ENSATEG00000011097	cpsf1	99	93.634	ENSACLG00000012231	cpsf1	99	92.837	Astatotilapia_calliptera
ENSATEG00000011097	cpsf1	100	79.164	ENSAMXG00000008485	cpsf1	100	78.624	Astyanax_mexicanus
ENSATEG00000011097	cpsf1	100	77.071	ENSBTAG00000008355	CPSF1	100	77.521	Bos_taurus
ENSATEG00000011097	cpsf1	100	32.582	WBGene00022301	cpsf-1	99	41.808	Caenorhabditis_elegans
ENSATEG00000011097	cpsf1	100	78.152	ENSCJAG00000021421	CPSF1	100	77.748	Callithrix_jacchus
ENSATEG00000011097	cpsf1	99	78.358	ENSCAFG00000001600	CPSF1	100	77.419	Canis_familiaris
ENSATEG00000011097	cpsf1	100	78.032	ENSCAFG00020020821	CPSF1	100	77.695	Canis_lupus_dingo
ENSATEG00000011097	cpsf1	100	74.497	ENSCHIG00000015833	CPSF1	100	74.072	Capra_hircus
ENSATEG00000011097	cpsf1	100	78.167	ENSTSYG00000028560	CPSF1	100	81.019	Carlito_syrichta
ENSATEG00000011097	cpsf1	99	77.393	ENSCAPG00000014921	CPSF1	98	77.841	Cavia_aperea
ENSATEG00000011097	cpsf1	100	77.006	ENSCPOG00000011448	CPSF1	100	76.669	Cavia_porcellus
ENSATEG00000011097	cpsf1	100	78.220	ENSCCAG00000037658	CPSF1	100	80.275	Cebus_capucinus
ENSATEG00000011097	cpsf1	100	77.898	ENSCATG00000037234	CPSF1	100	80.093	Cercocebus_atys
ENSATEG00000011097	cpsf1	100	78.340	ENSCLAG00000012166	CPSF1	100	78.003	Chinchilla_lanigera
ENSATEG00000011097	cpsf1	100	78.287	ENSCSAG00000008502	CPSF1	100	77.815	Chlorocebus_sabaeus
ENSATEG00000011097	cpsf1	99	80.027	ENSCPBG00000018910	CPSF1	96	80.164	Chrysemys_picta_bellii
ENSATEG00000011097	cpsf1	96	48.143	ENSCING00000000514	-	100	47.829	Ciona_intestinalis
ENSATEG00000011097	cpsf1	99	48.318	ENSCSAVG00000002293	-	99	50.698	Ciona_savignyi
ENSATEG00000011097	cpsf1	99	75.694	ENSCANG00000032760	CPSF1	100	80.556	Colobus_angolensis_palliatus
ENSATEG00000011097	cpsf1	100	78.070	ENSCGRG00001016344	Cpsf1	100	77.598	Cricetulus_griseus_chok1gshd
ENSATEG00000011097	cpsf1	100	76.383	ENSCGRG00000003118	Cpsf1	100	75.911	Cricetulus_griseus_crigri
ENSATEG00000011097	cpsf1	100	86.883	ENSCSEG00000013464	cpsf1	99	89.956	Cynoglossus_semilaevis
ENSATEG00000011097	cpsf1	88	86.219	ENSCVAG00000014059	cpsf1	100	81.944	Cyprinodon_variegatus
ENSATEG00000011097	cpsf1	100	86.689	ENSDARG00000034178	cpsf1	100	86.486	Danio_rerio
ENSATEG00000011097	cpsf1	57	81.792	ENSDNOG00000043654	CPSF1	94	81.503	Dasypus_novemcinctus
ENSATEG00000011097	cpsf1	99	77.940	ENSDORG00000006278	Cpsf1	98	78.193	Dipodomys_ordii
ENSATEG00000011097	cpsf1	100	44.232	FBgn0024698	Cpsf160	100	43.845	Drosophila_melanogaster
ENSATEG00000011097	cpsf1	81	85.235	ENSETEG00000006022	CPSF1	83	85.235	Echinops_telfairi
ENSATEG00000011097	cpsf1	100	77.995	ENSEASG00005010774	CPSF1	100	77.793	Equus_asinus_asinus
ENSATEG00000011097	cpsf1	100	77.860	ENSECAG00000022209	CPSF1	100	77.658	Equus_caballus
ENSATEG00000011097	cpsf1	99	78.848	ENSEEUG00000000471	CPSF1	100	77.508	Erinaceus_europaeus
ENSATEG00000011097	cpsf1	100	86.770	ENSELUG00000012271	cpsf1	100	86.299	Esox_lucius
ENSATEG00000011097	cpsf1	100	78.543	ENSFDAG00000016060	CPSF1	100	78.205	Fukomys_damarensis
ENSATEG00000011097	cpsf1	100	87.062	ENSFHEG00000016801	cpsf1	100	86.995	Fundulus_heteroclitus
ENSATEG00000011097	cpsf1	100	86.244	ENSGMOG00000000796	cpsf1	100	86.379	Gadus_morhua
ENSATEG00000011097	cpsf1	96	85.484	ENSGAFG00000018890	cpsf1	100	85.484	Gambusia_affinis
ENSATEG00000011097	cpsf1	100	89.449	ENSGACG00000008703	cpsf1	100	89.400	Gasterosteus_aculeatus
ENSATEG00000011097	cpsf1	100	77.172	ENSGAGG00000004276	CPSF1	98	80.569	Gopherus_agassizii
ENSATEG00000011097	cpsf1	100	78.003	ENSGGOG00000016185	CPSF1	100	80.093	Gorilla_gorilla
ENSATEG00000011097	cpsf1	100	91.045	ENSHBUG00000018900	cpsf1	100	90.977	Haplochromis_burtoni
ENSATEG00000011097	cpsf1	100	78.475	ENSHGLG00000016139	CPSF1	100	78.138	Heterocephalus_glaber_female
ENSATEG00000011097	cpsf1	100	78.408	ENSHGLG00100009750	CPSF1	100	78.070	Heterocephalus_glaber_male
ENSATEG00000011097	cpsf1	100	89.756	ENSHCOG00000018509	cpsf1	100	89.756	Hippocampus_comes
ENSATEG00000011097	cpsf1	100	83.614	ENSIPUG00000011259	cpsf1	100	83.345	Ictalurus_punctatus
ENSATEG00000011097	cpsf1	99	77.801	ENSSTOG00000009957	CPSF1	98	78.536	Ictidomys_tridecemlineatus
ENSATEG00000011097	cpsf1	100	78.340	ENSJJAG00000023002	Cpsf1	100	77.935	Jaculus_jaculus
ENSATEG00000011097	cpsf1	91	93.730	ENSKMAG00000001940	cpsf1	99	93.730	Kryptolebias_marmoratus
ENSATEG00000011097	cpsf1	100	91.859	ENSLBEG00000003601	cpsf1	100	91.791	Labrus_bergylta
ENSATEG00000011097	cpsf1	87	79.665	ENSLACG00000000233	CPSF1	92	79.545	Latimeria_chalumnae
ENSATEG00000011097	cpsf1	100	82.020	ENSLOCG00000008484	cpsf1	100	82.088	Lepisosteus_oculatus
ENSATEG00000011097	cpsf1	99	78.234	ENSLAFG00000022601	CPSF1	98	78.476	Loxodonta_africana
ENSATEG00000011097	cpsf1	100	77.950	ENSMFAG00000037013	CPSF1	100	80.093	Macaca_fascicularis
ENSATEG00000011097	cpsf1	100	77.950	ENSMMUG00000007380	CPSF1	100	80.093	Macaca_mulatta
ENSATEG00000011097	cpsf1	99	78.328	ENSMNEG00000043564	CPSF1	100	80.093	Macaca_nemestrina
ENSATEG00000011097	cpsf1	100	77.950	ENSMLEG00000043010	CPSF1	100	80.093	Mandrillus_leucophaeus
ENSATEG00000011097	cpsf1	100	94.980	ENSMAMG00000003803	cpsf1	100	94.573	Mastacembelus_armatus
ENSATEG00000011097	cpsf1	100	87.653	ENSMZEG00005001168	cpsf1	100	87.585	Maylandia_zebra
ENSATEG00000011097	cpsf1	100	78.070	ENSMAUG00000003601	Cpsf1	100	77.598	Mesocricetus_auratus
ENSATEG00000011097	cpsf1	100	78.003	ENSMICG00000015767	CPSF1	100	77.546	Microcebus_murinus
ENSATEG00000011097	cpsf1	100	77.868	ENSMOCG00000022758	Cpsf1	100	77.530	Microtus_ochrogaster
ENSATEG00000011097	cpsf1	100	90.209	ENSMMOG00000021245	cpsf1	100	89.602	Mola_mola
ENSATEG00000011097	cpsf1	100	78.855	ENSMODG00000010755	CPSF1	100	78.586	Monodelphis_domestica
ENSATEG00000011097	cpsf1	100	93.419	ENSMALG00000020545	cpsf1	100	93.419	Monopterus_albus
ENSATEG00000011097	cpsf1	100	78.273	MGP_CAROLIEiJ_G0019936	Cpsf1	100	77.935	Mus_caroli
ENSATEG00000011097	cpsf1	100	78.340	ENSMUSG00000034022	Cpsf1	100	78.003	Mus_musculus
ENSATEG00000011097	cpsf1	100	78.273	MGP_PahariEiJ_G0019946	Cpsf1	100	77.935	Mus_pahari
ENSATEG00000011097	cpsf1	100	78.340	MGP_SPRETEiJ_G0020839	Cpsf1	100	78.003	Mus_spretus
ENSATEG00000011097	cpsf1	96	78.474	ENSMPUG00000006419	CPSF1	93	78.402	Mustela_putorius_furo
ENSATEG00000011097	cpsf1	100	78.205	ENSNGAG00000022460	Cpsf1	100	77.800	Nannospalax_galili
ENSATEG00000011097	cpsf1	100	85.017	ENSNBRG00000000813	cpsf1	100	85.017	Neolamprologus_brichardi
ENSATEG00000011097	cpsf1	86	69.369	ENSNLEG00000010633	-	100	80.093	Nomascus_leucogenys
ENSATEG00000011097	cpsf1	85	87.209	ENSMEUG00000014922	CPSF1	84	87.209	Notamacropus_eugenii
ENSATEG00000011097	cpsf1	63	88.947	ENSOPRG00000004693	-	70	88.947	Ochotona_princeps
ENSATEG00000011097	cpsf1	100	78.408	ENSODEG00000013995	CPSF1	100	78.138	Octodon_degus
ENSATEG00000011097	cpsf1	100	91.425	ENSONIG00000007676	cpsf1	100	91.020	Oreochromis_niloticus
ENSATEG00000011097	cpsf1	61	77.143	ENSOANG00000010716	CPSF1	89	77.143	Ornithorhynchus_anatinus
ENSATEG00000011097	cpsf1	100	90.231	ENSORLG00000013544	cpsf1	100	89.824	Oryzias_latipes
ENSATEG00000011097	cpsf1	100	90.231	ENSORLG00020021693	cpsf1	100	89.824	Oryzias_latipes_hni
ENSATEG00000011097	cpsf1	100	90.163	ENSORLG00015009979	cpsf1	100	89.824	Oryzias_latipes_hsok
ENSATEG00000011097	cpsf1	100	90.508	ENSOMEG00000011849	cpsf1	100	90.237	Oryzias_melastigma
ENSATEG00000011097	cpsf1	100	78.220	ENSOGAG00000000315	CPSF1	100	77.950	Otolemur_garnettii
ENSATEG00000011097	cpsf1	100	78.018	ENSPPAG00000019280	CPSF1	100	81.448	Pan_paniscus
ENSATEG00000011097	cpsf1	100	76.724	ENSPTRG00000051253	-	100	81.448	Pan_troglodytes
ENSATEG00000011097	cpsf1	100	78.018	ENSPTRG00000049288	-	100	81.448	Pan_troglodytes
ENSATEG00000011097	cpsf1	99	78.397	ENSPANG00000015005	CPSF1	100	80.093	Papio_anubis
ENSATEG00000011097	cpsf1	100	85.965	ENSPKIG00000002582	cpsf1	100	85.999	Paramormyrops_kingsleyae
ENSATEG00000011097	cpsf1	100	78.937	ENSPCIG00000009035	CPSF1	100	78.668	Phascolarctos_cinereus
ENSATEG00000011097	cpsf1	100	89.891	ENSPFOG00000012870	cpsf1	100	89.756	Poecilia_formosa
ENSATEG00000011097	cpsf1	100	90.434	ENSPREG00000016307	cpsf1	100	89.824	Poecilia_reticulata
ENSATEG00000011097	cpsf1	100	71.159	ENSPPYG00000018973	CPSF1	100	70.755	Pongo_abelii
ENSATEG00000011097	cpsf1	94	85.227	ENSPCAG00000011541	CPSF1	93	85.227	Procavia_capensis
ENSATEG00000011097	cpsf1	100	74.848	ENSPCOG00000020001	CPSF1	100	80.093	Propithecus_coquereli
ENSATEG00000011097	cpsf1	91	88.286	ENSPVAG00000006761	CPSF1	91	88.286	Pteropus_vampyrus
ENSATEG00000011097	cpsf1	100	93.831	ENSPNYG00000004906	cpsf1	100	93.085	Pundamilia_nyererei
ENSATEG00000011097	cpsf1	100	81.517	ENSPNAG00000024395	cpsf1	100	80.907	Pygocentrus_nattereri
ENSATEG00000011097	cpsf1	100	78.176	ENSRNOG00000030705	Cpsf1	100	77.838	Rattus_norvegicus
ENSATEG00000011097	cpsf1	100	77.883	ENSRBIG00000044907	CPSF1	100	80.556	Rhinopithecus_bieti
ENSATEG00000011097	cpsf1	100	77.950	ENSRROG00000044861	CPSF1	100	80.556	Rhinopithecus_roxellana
ENSATEG00000011097	cpsf1	99	78.397	ENSSBOG00000027177	CPSF1	99	78.491	Saimiri_boliviensis_boliviensis
ENSATEG00000011097	cpsf1	100	78.855	ENSSHAG00000006500	CPSF1	100	78.519	Sarcophilus_harrisii
ENSATEG00000011097	cpsf1	100	83.502	ENSSFOG00015004606	cpsf1	100	86.151	Scleropages_formosus
ENSATEG00000011097	cpsf1	100	92.881	ENSSMAG00000020547	cpsf1	100	93.153	Scophthalmus_maximus
ENSATEG00000011097	cpsf1	100	91.864	ENSSDUG00000001100	cpsf1	100	91.260	Seriola_dumerili
ENSATEG00000011097	cpsf1	100	91.864	ENSSLDG00000003619	cpsf1	100	91.051	Seriola_lalandi_dorsalis
ENSATEG00000011097	cpsf1	89	74.883	ENSSARG00000003643	CPSF1	92	74.804	Sorex_araneus
ENSATEG00000011097	cpsf1	99	81.053	ENSSPUG00000014396	CPSF1	99	80.959	Sphenodon_punctatus
ENSATEG00000011097	cpsf1	100	95.387	ENSSPAG00000005349	cpsf1	100	94.437	Stegastes_partitus
ENSATEG00000011097	cpsf1	100	77.104	ENSSSCG00000005906	CPSF1	100	76.970	Sus_scrofa
ENSATEG00000011097	cpsf1	99	91.983	ENSTRUG00000013134	cpsf1	99	91.366	Takifugu_rubripes
ENSATEG00000011097	cpsf1	100	89.113	ENSTNIG00000014027	cpsf1	100	88.844	Tetraodon_nigroviridis
ENSATEG00000011097	cpsf1	77	73.438	ENSTBEG00000001756	CPSF1	89	74.549	Tupaia_belangeri
ENSATEG00000011097	cpsf1	90	83.793	ENSTTRG00000001937	CPSF1	90	83.621	Tursiops_truncatus
ENSATEG00000011097	cpsf1	99	78.512	ENSUAMG00000006476	CPSF1	97	78.829	Ursus_americanus
ENSATEG00000011097	cpsf1	100	87.720	ENSXCOG00000003608	cpsf1	100	87.313	Xiphophorus_couchianus
ENSATEG00000011097	cpsf1	100	86.644	ENSXMAG00000005798	cpsf1	100	86.305	Xiphophorus_maculatus