EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000011117 (Gene tree)
Gene ID: 113173104
Gene Symbol: rab20
Alias: fb01f02|wu:fb01f02|wu:fj82g08|zgc:64047
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 2711 bases
Position: chrOOHO01000008.1:10092518-10095228
Accession: ZDB-GENE-030131-9143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000015979	MMR_HSR1	PF01926.23	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000016231	-	774	-	ENSATEP00000015979	257 (aa)	-	-

Gene Model

Click here to download ENSATEG00000011117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000011117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000011117	rab20	51	37.037	ENSATEG00000014748	rab5aa	63	37.037
ENSATEG00000011117	rab20	51	34.815	ENSATEG00000010475	rab30	67	34.815
ENSATEG00000011117	rab20	63	31.548	ENSATEG00000023662	-	82	31.548
ENSATEG00000011117	rab20	56	31.613	ENSATEG00000006851	rab34b	59	31.613
ENSATEG00000011117	rab20	51	34.074	ENSATEG00000023730	rab11ba	62	34.074
ENSATEG00000011117	rab20	60	30.435	ENSATEG00000010784	si:dkey-34d22.5	57	30.435
ENSATEG00000011117	rab20	50	33.582	ENSATEG00000006124	rab25b	64	33.582
ENSATEG00000011117	rab20	74	30.732	ENSATEG00000017702	rab33a	89	30.732
ENSATEG00000011117	rab20	51	36.296	ENSATEG00000001937	rab5c	62	36.296
ENSATEG00000011117	rab20	51	34.074	ENSATEG00000023725	-	62	34.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000011117	rab20	100	60.700	ENSAPLG00000011744	RAB20	99	60.700	Anas_platyrhynchos
ENSATEG00000011117	rab20	99	57.422	ENSACAG00000014045	RAB20	99	57.422	Anolis_carolinensis
ENSATEG00000011117	rab20	100	67.442	ENSAMXG00000003504	rab20	99	68.217	Astyanax_mexicanus
ENSATEG00000011117	rab20	99	63.922	ENSCPBG00000005866	RAB20	99	63.922	Chrysemys_picta_bellii
ENSATEG00000011117	rab20	100	77.432	ENSCSEG00000011160	rab20	100	77.432	Cynoglossus_semilaevis
ENSATEG00000011117	rab20	99	73.047	ENSDARG00000005049	rab20	97	73.047	Danio_rerio
ENSATEG00000011117	rab20	99	78.988	ENSELUG00000004092	rab20	98	78.988	Esox_lucius
ENSATEG00000011117	rab20	100	60.311	ENSFALG00000004409	RAB20	99	60.311	Ficedula_albicollis
ENSATEG00000011117	rab20	100	82.625	ENSGACG00000003527	rab20	100	82.625	Gasterosteus_aculeatus
ENSATEG00000011117	rab20	100	81.783	ENSHCOG00000013468	rab20	98	81.783	Hippocampus_comes
ENSATEG00000011117	rab20	100	69.261	ENSIPUG00000000432	RAB20	97	69.261	Ictalurus_punctatus
ENSATEG00000011117	rab20	100	69.261	ENSIPUG00000018288	RAB20	97	69.261	Ictalurus_punctatus
ENSATEG00000011117	rab20	99	63.281	ENSLACG00000011001	RAB20	99	63.281	Latimeria_chalumnae
ENSATEG00000011117	rab20	100	91.829	ENSMAMG00000015214	rab20	98	91.829	Mastacembelus_armatus
ENSATEG00000011117	rab20	100	79.767	ENSMMOG00000020022	rab20	100	79.767	Mola_mola
ENSATEG00000011117	rab20	100	58.755	ENSMEUG00000009442	RAB20	99	58.755	Notamacropus_eugenii
ENSATEG00000011117	rab20	86	45.455	ENSPMAG00000004439	rab20	98	45.455	Petromyzon_marinus
ENSATEG00000011117	rab20	100	70.039	ENSPNAG00000008867	rab20	99	71.595	Pygocentrus_nattereri
ENSATEG00000011117	rab20	100	86.770	ENSSMAG00000018818	rab20	100	86.770	Scophthalmus_maximus
ENSATEG00000011117	rab20	100	90.272	ENSSDUG00000005148	rab20	98	90.272	Seriola_dumerili
ENSATEG00000011117	rab20	100	61.089	ENSTGUG00000008797	RAB20	99	61.089	Taeniopygia_guttata
ENSATEG00000011117	rab20	100	80.934	ENSTRUG00000022951	rab20	98	80.934	Takifugu_rubripes
ENSATEG00000011117	rab20	95	75.820	ENSTNIG00000013920	rab20	100	75.486	Tetraodon_nigroviridis