EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000011734 (Gene tree)
Gene ID: 113157493
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 11021 bases
Position: chrOOHO01000015.1:8372142-8383162
Accession: 113157493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000016872	RRM_1	PF00076.22	4.8e-13	1	1
ENSATEP00000016855	RRM_1	PF00076.22	5.1e-13	1	1
ENSATEP00000016864	RRM_1	PF00076.22	5.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000017157	-	3173	-	ENSATEP00000016872	296 (aa)	-	-
ENSATET00000017149	-	2850	-	ENSATEP00000016864	307 (aa)	XP_026208803	UPI000E4636E3
ENSATET00000017140	-	3127	-	ENSATEP00000016855	307 (aa)	XP_026208803	UPI000E4636E3

Gene Model

Click here to download ENSATEG00000011734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000011734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000011734	-	74	52.610	ENSATEG00000022219	-	76	51.639
ENSATEG00000011734	-	71	53.271	ENSATEG00000004870	raly	68	52.358
ENSATEG00000011734	-	85	82.625	ENSATEG00000018006	-	79	88.940
ENSATEG00000011734	-	74	56.485	ENSATEG00000023356	-	96	54.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000011734	-	74	58.296	ENSG00000184672	RALYL	93	78.481	Homo_sapiens
ENSATEG00000011734	-	92	94.346	ENSAPOG00000006963	hnrnpc	92	94.346	Acanthochromis_polyacanthus
ENSATEG00000011734	-	100	93.960	ENSACIG00000000270	-	100	94.966	Amphilophus_citrinellus
ENSATEG00000011734	-	99	76.623	ENSACIG00000016568	-	92	78.884	Amphilophus_citrinellus
ENSATEG00000011734	-	92	93.993	ENSAOCG00000003896	-	92	93.993	Amphiprion_ocellaris
ENSATEG00000011734	-	84	81.890	ENSAOCG00000021616	-	79	83.721	Amphiprion_ocellaris
ENSATEG00000011734	-	92	93.993	ENSAPEG00000001489	-	92	93.993	Amphiprion_percula
ENSATEG00000011734	-	85	81.783	ENSAPEG00000019962	-	82	83.333	Amphiprion_percula
ENSATEG00000011734	-	74	53.390	ENSAPLG00000015574	RALYL	79	54.274	Anas_platyrhynchos
ENSATEG00000011734	-	95	46.644	ENSACAG00000028464	RALYL	78	53.846	Anolis_carolinensis
ENSATEG00000011734	-	74	57.848	ENSANAG00000023383	RALYL	77	57.658	Aotus_nancymaae
ENSATEG00000011734	-	100	88.673	ENSACLG00000000995	-	92	92.606	Astatotilapia_calliptera
ENSATEG00000011734	-	85	81.250	ENSACLG00000005707	-	86	83.071	Astatotilapia_calliptera
ENSATEG00000011734	-	100	88.350	ENSACLG00000013636	-	90	92.254	Astatotilapia_calliptera
ENSATEG00000011734	-	70	76.667	ENSAMXG00000042946	hnrnpc	97	75.393	Astyanax_mexicanus
ENSATEG00000011734	-	85	76.984	ENSAMXG00000034915	zgc:55733	87	77.381	Astyanax_mexicanus
ENSATEG00000011734	-	74	57.848	ENSCJAG00000000402	RALYL	77	57.658	Callithrix_jacchus
ENSATEG00000011734	-	95	47.315	ENSCPOG00000012314	RALYL	78	54.506	Cavia_porcellus
ENSATEG00000011734	-	74	58.296	ENSCCAG00000025003	RALYL	77	78.481	Cebus_capucinus
ENSATEG00000011734	-	74	58.296	ENSCATG00000042145	RALYL	77	58.108	Cercocebus_atys
ENSATEG00000011734	-	95	47.315	ENSCLAG00000005228	RALYL	78	54.506	Chinchilla_lanigera
ENSATEG00000011734	-	71	53.304	ENSCHOG00000013228	RALYL	75	52.863	Choloepus_hoffmanni
ENSATEG00000011734	-	74	58.296	ENSCANG00000039144	RALYL	77	58.108	Colobus_angolensis_palliatus
ENSATEG00000011734	-	95	47.315	ENSCGRG00001009241	Ralyl	78	54.701	Cricetulus_griseus_chok1gshd
ENSATEG00000011734	-	85	76.078	ENSCSEG00000021349	-	79	77.821	Cynoglossus_semilaevis
ENSATEG00000011734	-	74	82.727	ENSCSEG00000019769	-	75	80.909	Cynoglossus_semilaevis
ENSATEG00000011734	-	84	85.039	ENSCVAG00000016981	-	78	82.558	Cyprinodon_variegatus
ENSATEG00000011734	-	99	72.148	ENSCVAG00000002797	-	86	70.703	Cyprinodon_variegatus
ENSATEG00000011734	-	92	79.412	ENSDARG00000103845	zgc:55733	91	79.051	Danio_rerio
ENSATEG00000011734	-	78	80.169	ENSDARG00000053810	hnrnpc	80	78.210	Danio_rerio
ENSATEG00000011734	-	74	54.237	ENSDORG00000003721	Ralyl	78	55.128	Dipodomys_ordii
ENSATEG00000011734	-	55	57.143	ENSETEG00000014028	RALYL	82	60.123	Echinops_telfairi
ENSATEG00000011734	-	72	48.018	ENSEBUG00000012363	hnrnpc	67	47.137	Eptatretus_burgeri
ENSATEG00000011734	-	70	50.000	ENSEBUG00000006049	RALYL	74	48.113	Eptatretus_burgeri
ENSATEG00000011734	-	74	54.237	ENSEEUG00000007202	RALYL	79	55.411	Erinaceus_europaeus
ENSATEG00000011734	-	85	83.137	ENSELUG00000004132	-	88	80.843	Esox_lucius
ENSATEG00000011734	-	79	81.538	ENSELUG00000007714	-	88	78.462	Esox_lucius
ENSATEG00000011734	-	71	57.870	ENSFALG00000008647	RALYL	97	58.605	Ficedula_albicollis
ENSATEG00000011734	-	92	86.620	ENSFHEG00000003605	-	93	85.915	Fundulus_heteroclitus
ENSATEG00000011734	-	85	79.336	ENSFHEG00000007278	-	94	71.521	Fundulus_heteroclitus
ENSATEG00000011734	-	74	56.054	ENSGALG00000036938	RALYL	78	54.274	Gallus_gallus
ENSATEG00000011734	-	99	75.000	ENSGAFG00000020992	-	78	86.636	Gambusia_affinis
ENSATEG00000011734	-	100	83.495	ENSGAFG00000020486	-	100	85.437	Gambusia_affinis
ENSATEG00000011734	-	74	74.667	ENSGACG00000018932	-	88	72.727	Gasterosteus_aculeatus
ENSATEG00000011734	-	89	81.413	ENSGACG00000017772	-	97	82.609	Gasterosteus_aculeatus
ENSATEG00000011734	-	74	58.296	ENSGGOG00000000841	RALYL	77	58.108	Gorilla_gorilla
ENSATEG00000011734	-	99	75.806	ENSHBUG00000010527	-	81	82.308	Haplochromis_burtoni
ENSATEG00000011734	-	100	88.997	ENSHBUG00000018342	-	92	92.958	Haplochromis_burtoni
ENSATEG00000011734	-	74	53.617	ENSHGLG00000004866	RALYL	78	54.077	Heterocephalus_glaber_female
ENSATEG00000011734	-	74	53.617	ENSHGLG00100017480	RALYL	78	54.077	Heterocephalus_glaber_male
ENSATEG00000011734	-	84	78.868	ENSHCOG00000012333	hnrnpc	87	74.815	Hippocampus_comes
ENSATEG00000011734	-	85	79.528	ENSIPUG00000011271	hnrnpc	97	79.372	Ictalurus_punctatus
ENSATEG00000011734	-	92	78.445	ENSIPUG00000008666	zgc:55733	94	82.160	Ictalurus_punctatus
ENSATEG00000011734	-	74	53.814	ENSSTOG00000012583	RALYL	80	54.701	Ictidomys_tridecemlineatus
ENSATEG00000011734	-	84	81.423	ENSKMAG00000018265	-	80	83.268	Kryptolebias_marmoratus
ENSATEG00000011734	-	91	90.000	ENSKMAG00000011170	-	89	91.176	Kryptolebias_marmoratus
ENSATEG00000011734	-	85	80.784	ENSLBEG00000006193	-	80	84.047	Labrus_bergylta
ENSATEG00000011734	-	92	82.562	ENSLBEG00000024418	-	92	80.427	Labrus_bergylta
ENSATEG00000011734	-	90	87.732	ENSLBEG00000006979	-	91	85.821	Labrus_bergylta
ENSATEG00000011734	-	85	72.243	ENSLOCG00000002560	hnrnpc	89	71.538	Lepisosteus_oculatus
ENSATEG00000011734	-	74	58.296	ENSMNEG00000033288	RALYL	77	58.108	Macaca_nemestrina
ENSATEG00000011734	-	74	58.296	ENSMLEG00000038284	RALYL	77	58.108	Mandrillus_leucophaeus
ENSATEG00000011734	-	99	92.491	ENSMAMG00000012236	-	100	91.586	Mastacembelus_armatus
ENSATEG00000011734	-	85	81.081	ENSMAMG00000008033	-	89	82.625	Mastacembelus_armatus
ENSATEG00000011734	-	99	75.484	ENSMZEG00005024249	-	81	82.812	Maylandia_zebra
ENSATEG00000011734	-	100	88.673	ENSMZEG00005020460	-	92	92.606	Maylandia_zebra
ENSATEG00000011734	-	95	47.315	ENSMAUG00000015149	Ralyl	78	54.701	Mesocricetus_auratus
ENSATEG00000011734	-	74	56.696	ENSMICG00000005558	RALYL	80	78.481	Microcebus_murinus
ENSATEG00000011734	-	95	47.333	ENSMOCG00000017371	Ralyl	78	54.701	Microtus_ochrogaster
ENSATEG00000011734	-	85	89.804	ENSMMOG00000021465	-	89	91.765	Mola_mola
ENSATEG00000011734	-	83	81.600	ENSMMOG00000019520	-	83	87.383	Mola_mola
ENSATEG00000011734	-	85	81.102	ENSMALG00000007520	-	99	81.081	Monopterus_albus
ENSATEG00000011734	-	85	84.411	ENSMALG00000014623	-	81	84.375	Monopterus_albus
ENSATEG00000011734	-	95	46.980	ENSMUSG00000039717	Ralyl	93	77.215	Mus_musculus
ENSATEG00000011734	-	74	54.661	ENSMPUG00000010724	RALYL	78	53.846	Mustela_putorius_furo
ENSATEG00000011734	-	95	47.333	ENSNGAG00000013375	Ralyl	78	54.701	Nannospalax_galili
ENSATEG00000011734	-	100	89.597	ENSNBRG00000004912	-	99	92.282	Neolamprologus_brichardi
ENSATEG00000011734	-	99	75.563	ENSNBRG00000015676	-	76	87.500	Neolamprologus_brichardi
ENSATEG00000011734	-	74	58.296	ENSNLEG00000002702	RALYL	74	58.108	Nomascus_leucogenys
ENSATEG00000011734	-	60	50.515	ENSOPRG00000013650	-	98	49.485	Ochotona_princeps
ENSATEG00000011734	-	95	47.315	ENSODEG00000001012	RALYL	78	54.506	Octodon_degus
ENSATEG00000011734	-	99	85.256	ENSONIG00000007859	-	100	88.462	Oreochromis_niloticus
ENSATEG00000011734	-	99	75.806	ENSONIG00000018350	-	81	82.308	Oreochromis_niloticus
ENSATEG00000011734	-	84	80.077	ENSORLG00000003144	-	79	81.509	Oryzias_latipes
ENSATEG00000011734	-	100	77.670	ENSORLG00000009999	-	100	79.935	Oryzias_latipes
ENSATEG00000011734	-	100	77.346	ENSORLG00020018228	hnrnpc	100	79.612	Oryzias_latipes_hni
ENSATEG00000011734	-	84	80.077	ENSORLG00015009460	-	79	81.509	Oryzias_latipes_hsok
ENSATEG00000011734	-	100	77.670	ENSORLG00015019755	-	100	79.935	Oryzias_latipes_hsok
ENSATEG00000011734	-	86	80.150	ENSOMEG00000020488	-	100	80.000	Oryzias_melastigma
ENSATEG00000011734	-	84	82.677	ENSOMEG00000022665	-	80	84.109	Oryzias_melastigma
ENSATEG00000011734	-	74	58.296	ENSPPAG00000038705	RALYL	77	58.108	Pan_paniscus
ENSATEG00000011734	-	74	58.407	ENSPPRG00000018612	RALYL	77	57.658	Panthera_pardus
ENSATEG00000011734	-	74	58.407	ENSPTIG00000020331	RALYL	77	57.658	Panthera_tigris_altaica
ENSATEG00000011734	-	74	58.296	ENSPTRG00000020381	RALYL	77	58.108	Pan_troglodytes
ENSATEG00000011734	-	74	58.296	ENSPANG00000029305	RALYL	77	58.108	Papio_anubis
ENSATEG00000011734	-	92	80.071	ENSPKIG00000008592	-	88	80.427	Paramormyrops_kingsleyae
ENSATEG00000011734	-	92	78.571	ENSPKIG00000022837	-	88	81.786	Paramormyrops_kingsleyae
ENSATEG00000011734	-	74	54.202	ENSPSIG00000011135	RALYL	78	54.661	Pelodiscus_sinensis
ENSATEG00000011734	-	69	80.976	ENSPMGG00000017774	-	92	66.667	Periophthalmus_magnuspinnatus
ENSATEG00000011734	-	73	91.204	ENSPMGG00000013144	-	82	88.372	Periophthalmus_magnuspinnatus
ENSATEG00000011734	-	95	47.315	ENSPEMG00000016447	Ralyl	78	54.701	Peromyscus_maniculatus_bairdii
ENSATEG00000011734	-	71	54.783	ENSPMAG00000002407	RALYL	97	53.540	Petromyzon_marinus
ENSATEG00000011734	-	100	84.194	ENSPFOG00000001583	-	100	85.806	Poecilia_formosa
ENSATEG00000011734	-	98	72.638	ENSPFOG00000002643	-	81	81.609	Poecilia_formosa
ENSATEG00000011734	-	100	83.495	ENSPLAG00000015305	-	100	85.113	Poecilia_latipinna
ENSATEG00000011734	-	84	81.028	ENSPLAG00000000061	-	79	82.879	Poecilia_latipinna
ENSATEG00000011734	-	84	80.632	ENSPMEG00000016524	-	79	84.436	Poecilia_mexicana
ENSATEG00000011734	-	100	84.466	ENSPMEG00000004802	-	100	85.761	Poecilia_mexicana
ENSATEG00000011734	-	92	85.915	ENSPREG00000007928	-	93	85.915	Poecilia_reticulata
ENSATEG00000011734	-	84	80.237	ENSPREG00000001852	-	85	82.101	Poecilia_reticulata
ENSATEG00000011734	-	71	48.165	ENSPPYG00000018710	-	63	78.495	Pongo_abelii
ENSATEG00000011734	-	74	53.191	ENSPVAG00000010821	RALYL	79	53.814	Pteropus_vampyrus
ENSATEG00000011734	-	93	87.004	ENSPNYG00000020293	-	87	92.157	Pundamilia_nyererei
ENSATEG00000011734	-	99	73.826	ENSPNYG00000003747	-	86	82.308	Pundamilia_nyererei
ENSATEG00000011734	-	86	73.801	ENSPNAG00000019200	zgc:55733	83	72.692	Pygocentrus_nattereri
ENSATEG00000011734	-	79	80.932	ENSPNAG00000015686	hnrnpc	86	79.608	Pygocentrus_nattereri
ENSATEG00000011734	-	74	58.296	ENSRROG00000023925	RALYL	82	76.543	Rhinopithecus_roxellana
ENSATEG00000011734	-	85	77.778	ENSSFOG00015012015	-	82	85.981	Scleropages_formosus
ENSATEG00000011734	-	85	79.771	ENSSFOG00015012924	-	80	97.468	Scleropages_formosus
ENSATEG00000011734	-	92	88.070	ENSSMAG00000013592	-	91	86.316	Scophthalmus_maximus
ENSATEG00000011734	-	99	73.651	ENSSMAG00000011147	-	97	74.286	Scophthalmus_maximus
ENSATEG00000011734	-	100	93.506	ENSSDUG00000001723	-	100	93.831	Seriola_dumerili
ENSATEG00000011734	-	99	79.934	ENSSDUG00000006730	-	81	85.938	Seriola_dumerili
ENSATEG00000011734	-	85	85.938	ENSSLDG00000007474	-	88	85.938	Seriola_lalandi_dorsalis
ENSATEG00000011734	-	90	94.245	ENSSLDG00000007454	-	87	95.094	Seriola_lalandi_dorsalis
ENSATEG00000011734	-	99	77.524	ENSSPAG00000013996	-	80	84.436	Stegastes_partitus
ENSATEG00000011734	-	91	95.000	ENSSPAG00000023204	-	92	95.053	Stegastes_partitus
ENSATEG00000011734	-	76	52.893	ENSTGUG00000011689	RALYL	82	53.750	Taeniopygia_guttata
ENSATEG00000011734	-	85	88.538	ENSTRUG00000020158	-	84	88.538	Takifugu_rubripes
ENSATEG00000011734	-	85	84.556	ENSTNIG00000007427	-	84	84.170	Tetraodon_nigroviridis
ENSATEG00000011734	-	85	79.608	ENSTNIG00000000334	-	94	80.156	Tetraodon_nigroviridis
ENSATEG00000011734	-	74	48.523	ENSTBEG00000005551	RALYL	91	48.291	Tupaia_belangeri
ENSATEG00000011734	-	74	51.948	ENSTTRG00000015762	RALYL	78	53.070	Tursiops_truncatus
ENSATEG00000011734	-	74	52.679	ENSVPAG00000008501	RALYL	78	53.363	Vicugna_pacos
ENSATEG00000011734	-	89	80.075	ENSXCOG00000006552	-	82	80.237	Xiphophorus_couchianus
ENSATEG00000011734	-	52	88.415	ENSXCOG00000019434	-	95	76.000	Xiphophorus_couchianus
ENSATEG00000011734	-	84	80.237	ENSXMAG00000022849	-	83	82.101	Xiphophorus_maculatus
ENSATEG00000011734	-	100	83.819	ENSXMAG00000009333	-	100	84.466	Xiphophorus_maculatus