EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000011758 (Gene tree)
Gene ID: 113170186
Gene Symbol: scaf4b
Alias: im:6900467|si:ch211-245g11.2
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 16808 bases
Position: chrOOHO01000021.1:5594742-5611549
Accession: 113170186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000016891	RRM_1	PF00076.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000017176	-	3125	XM_026372162	ENSATEP00000016891	741 (aa)	XP_026227947	-

Gene Model

Click here to download ENSATEG00000011758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000011758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000011758	scaf4b	100	76.604	ENSAPOG00000019615	scaf4b	98	77.674	Acanthochromis_polyacanthus
ENSATEG00000011758	scaf4b	78	50.077	ENSAPOG00000002946	scaf4a	60	49.412	Acanthochromis_polyacanthus
ENSATEG00000011758	scaf4b	100	77.406	ENSAOCG00000010433	scaf4b	98	77.674	Amphiprion_ocellaris
ENSATEG00000011758	scaf4b	100	77.273	ENSAPEG00000010913	scaf4b	98	77.540	Amphiprion_percula
ENSATEG00000011758	scaf4b	100	74.064	ENSACLG00000024833	scaf4b	98	73.797	Astatotilapia_calliptera
ENSATEG00000011758	scaf4b	54	72.222	ENSBTAG00000018855	SCAF4	58	66.667	Bos_taurus
ENSATEG00000011758	scaf4b	54	72.222	ENSCJAG00000008993	SCAF4	66	57.143	Callithrix_jacchus
ENSATEG00000011758	scaf4b	59	67.513	ENSCAFG00020026019	SCAF4	65	55.678	Canis_lupus_dingo
ENSATEG00000011758	scaf4b	54	72.222	ENSTSYG00000011344	SCAF4	57	56.800	Carlito_syrichta
ENSATEG00000011758	scaf4b	100	64.048	ENSCSEG00000012808	-	98	62.583	Cynoglossus_semilaevis
ENSATEG00000011758	scaf4b	100	64.847	ENSCVAG00000009142	scaf4b	98	63.515	Cyprinodon_variegatus
ENSATEG00000011758	scaf4b	51	72.028	ENSDARG00000018854	scaf4b	56	71.333	Danio_rerio
ENSATEG00000011758	scaf4b	65	47.248	ENSEBUG00000003891	SCAF8	62	45.059	Eptatretus_burgeri
ENSATEG00000011758	scaf4b	100	68.400	ENSFHEG00000007634	scaf4b	98	68.267	Fundulus_heteroclitus
ENSATEG00000011758	scaf4b	72	50.967	ENSGMOG00000015188	scaf4a	54	58.367	Gadus_morhua
ENSATEG00000011758	scaf4b	54	72.840	ENSJJAG00000019447	Scaf4	50	53.906	Jaculus_jaculus
ENSATEG00000011758	scaf4b	100	70.093	ENSKMAG00000005742	scaf4b	98	68.892	Kryptolebias_marmoratus
ENSATEG00000011758	scaf4b	99	44.789	ENSLOCG00000009162	scaf4a	84	44.900	Lepisosteus_oculatus
ENSATEG00000011758	scaf4b	54	72.222	ENSMICG00000005256	SCAF4	51	56.800	Microcebus_murinus
ENSATEG00000011758	scaf4b	58	60.000	ENSMALG00000013825	scaf4a	70	56.627	Monopterus_albus
ENSATEG00000011758	scaf4b	54	72.840	MGP_CAROLIEiJ_G0020944	Scaf4	53	57.977	Mus_caroli
ENSATEG00000011758	scaf4b	71	62.701	ENSONIG00000005610	scaf4b	98	64.032	Oreochromis_niloticus
ENSATEG00000011758	scaf4b	100	65.013	ENSORLG00000003420	scaf4b	98	65.818	Oryzias_latipes
ENSATEG00000011758	scaf4b	100	65.194	ENSORLG00020013853	scaf4b	98	66.131	Oryzias_latipes_hni
ENSATEG00000011758	scaf4b	58	66.497	ENSPKIG00000022408	scaf4a	98	49.433	Paramormyrops_kingsleyae
ENSATEG00000011758	scaf4b	59	71.250	ENSPSIG00000014242	SCAF4	50	56.846	Pelodiscus_sinensis
ENSATEG00000011758	scaf4b	51	58.865	ENSPMAG00000006192	SCAF8	81	45.289	Petromyzon_marinus
ENSATEG00000011758	scaf4b	83	71.111	ENSPFOG00000003261	scaf4b	78	71.004	Poecilia_formosa
ENSATEG00000011758	scaf4b	100	63.764	ENSPLAG00000004403	-	98	63.205	Poecilia_latipinna
ENSATEG00000011758	scaf4b	100	63.764	ENSPMEG00000006666	-	98	63.205	Poecilia_mexicana
ENSATEG00000011758	scaf4b	100	63.555	ENSPREG00000013510	scaf4b	98	62.868	Poecilia_reticulata
ENSATEG00000011758	scaf4b	54	72.222	ENSPCOG00000018710	SCAF4	53	60.759	Propithecus_coquereli
ENSATEG00000011758	scaf4b	100	73.797	ENSPNYG00000010526	scaf4b	98	73.529	Pundamilia_nyererei
ENSATEG00000011758	scaf4b	100	60.000	ENSPNAG00000015199	-	64	60.000	Pygocentrus_nattereri
ENSATEG00000011758	scaf4b	100	78.400	ENSSMAG00000003738	scaf4b	98	77.733	Scophthalmus_maximus
ENSATEG00000011758	scaf4b	77	46.986	ENSSMAG00000017901	scaf4a	61	50.820	Scophthalmus_maximus
ENSATEG00000011758	scaf4b	99	41.860	ENSSDUG00000012918	scaf4a	59	48.521	Seriola_dumerili
ENSATEG00000011758	scaf4b	100	82.109	ENSSDUG00000012380	scaf4b	98	80.908	Seriola_dumerili
ENSATEG00000011758	scaf4b	100	81.976	ENSSLDG00000023152	-	98	80.774	Seriola_lalandi_dorsalis
ENSATEG00000011758	scaf4b	99	41.731	ENSSLDG00000021671	scaf4a	58	48.665	Seriola_lalandi_dorsalis
ENSATEG00000011758	scaf4b	100	60.940	ENSTRUG00000009536	-	98	59.732	Takifugu_rubripes
ENSATEG00000011758	scaf4b	59	67.005	ENSUMAG00000016962	SCAF4	68	49.515	Ursus_maritimus
ENSATEG00000011758	scaf4b	68	55.686	ENSXETG00000007351	scaf4	52	54.839	Xenopus_tropicalis