EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000011790 (Gene tree)
Gene ID: 113172345
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 12476 bases
Position: chrOOHO01000021.1:5614452-5626927
Accession: 113172345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000016940	Npa1	PF11707.8	2.6e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000017226	-	7284	XM_026375280	ENSATEP00000016940	2294 (aa)	XP_026231065	-

Gene Model

Click here to download ENSATEG00000011790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000011790's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000011790	urb1	96	44.330	ENSG00000142207	URB1	99	43.383	Homo_sapiens
ENSATEG00000011790	urb1	100	73.805	ENSAPOG00000020308	urb1	99	75.588	Acanthochromis_polyacanthus
ENSATEG00000011790	urb1	97	44.931	ENSAMEG00000011998	URB1	98	44.936	Ailuropoda_melanoleuca
ENSATEG00000011790	urb1	94	70.887	ENSACIG00000003248	urb1	97	70.980	Amphilophus_citrinellus
ENSATEG00000011790	urb1	100	68.439	ENSAOCG00000010364	urb1	100	68.439	Amphiprion_ocellaris
ENSATEG00000011790	urb1	97	76.994	ENSAPEG00000010758	urb1	99	76.994	Amphiprion_percula
ENSATEG00000011790	urb1	95	46.334	ENSAPLG00000012791	URB1	99	46.469	Anas_platyrhynchos
ENSATEG00000011790	urb1	97	44.768	ENSACAG00000002817	URB1	99	43.809	Anolis_carolinensis
ENSATEG00000011790	urb1	97	44.484	ENSANAG00000024617	URB1	99	43.648	Aotus_nancymaae
ENSATEG00000011790	urb1	100	74.663	ENSACLG00000024865	urb1	100	74.663	Astatotilapia_calliptera
ENSATEG00000011790	urb1	99	48.052	ENSAMXG00000012306	urb1	99	48.052	Astyanax_mexicanus
ENSATEG00000011790	urb1	99	42.637	ENSBTAG00000012412	URB1	99	42.765	Bos_taurus
ENSATEG00000011790	urb1	96	44.444	ENSCJAG00000009118	URB1	99	43.611	Callithrix_jacchus
ENSATEG00000011790	urb1	99	43.064	ENSCAFG00000008892	URB1	99	43.064	Canis_familiaris
ENSATEG00000011790	urb1	99	42.894	ENSCAFG00020025987	-	99	42.894	Canis_lupus_dingo
ENSATEG00000011790	urb1	99	42.374	ENSCAFG00020025994	-	99	42.374	Canis_lupus_dingo
ENSATEG00000011790	urb1	99	43.261	ENSCHIG00000015645	URB1	99	43.272	Capra_hircus
ENSATEG00000011790	urb1	100	43.499	ENSTSYG00000013286	URB1	99	43.510	Carlito_syrichta
ENSATEG00000011790	urb1	96	43.405	ENSCAPG00000015589	URB1	99	43.405	Cavia_aperea
ENSATEG00000011790	urb1	97	44.326	ENSCPOG00000006748	URB1	98	44.326	Cavia_porcellus
ENSATEG00000011790	urb1	96	44.558	ENSCCAG00000021299	URB1	99	43.721	Cebus_capucinus
ENSATEG00000011790	urb1	97	44.642	ENSCATG00000042630	URB1	99	43.817	Cercocebus_atys
ENSATEG00000011790	urb1	97	45.114	ENSCLAG00000005262	URB1	98	45.114	Chinchilla_lanigera
ENSATEG00000011790	urb1	97	43.717	ENSCSAG00000009584	URB1	99	42.973	Chlorocebus_sabaeus
ENSATEG00000011790	urb1	99	46.288	ENSCPBG00000006454	URB1	99	46.493	Chrysemys_picta_bellii
ENSATEG00000011790	urb1	97	44.509	ENSCANG00000031088	URB1	99	43.688	Colobus_angolensis_palliatus
ENSATEG00000011790	urb1	97	44.135	ENSCGRG00001010616	Urb1	98	44.135	Cricetulus_griseus_chok1gshd
ENSATEG00000011790	urb1	96	44.039	ENSCGRG00000015840	Urb1	99	44.039	Cricetulus_griseus_crigri
ENSATEG00000011790	urb1	100	67.703	ENSCSEG00000012616	urb1	99	67.703	Cynoglossus_semilaevis
ENSATEG00000011790	urb1	93	68.577	ENSCVAG00000009076	urb1	98	70.492	Cyprinodon_variegatus
ENSATEG00000011790	urb1	99	53.457	ENSDARG00000060308	urb1	99	53.587	Danio_rerio
ENSATEG00000011790	urb1	85	47.035	ENSDNOG00000015586	URB1	99	47.012	Dasypus_novemcinctus
ENSATEG00000011790	urb1	99	43.409	ENSDORG00000006735	Urb1	99	43.564	Dipodomys_ordii
ENSATEG00000011790	urb1	82	55.777	ENSETEG00000009080	URB1	83	55.777	Echinops_telfairi
ENSATEG00000011790	urb1	92	52.235	ENSEASG00005007711	URB1	97	45.390	Equus_asinus_asinus
ENSATEG00000011790	urb1	92	51.732	ENSECAG00000013206	URB1	99	51.732	Equus_caballus
ENSATEG00000011790	urb1	99	56.769	ENSELUG00000020516	urb1	99	56.702	Esox_lucius
ENSATEG00000011790	urb1	96	44.276	ENSFCAG00000002177	URB1	98	44.276	Felis_catus
ENSATEG00000011790	urb1	96	42.219	ENSFALG00000004636	URB1	99	42.168	Ficedula_albicollis
ENSATEG00000011790	urb1	97	44.922	ENSFDAG00000007288	URB1	93	44.913	Fukomys_damarensis
ENSATEG00000011790	urb1	99	65.717	ENSFHEG00000000202	urb1	99	68.867	Fundulus_heteroclitus
ENSATEG00000011790	urb1	93	59.269	ENSGMOG00000001838	urb1	94	59.269	Gadus_morhua
ENSATEG00000011790	urb1	99	45.217	ENSGALG00000015887	URB1	98	45.368	Gallus_gallus
ENSATEG00000011790	urb1	99	66.028	ENSGAFG00000020694	urb1	98	68.135	Gambusia_affinis
ENSATEG00000011790	urb1	99	74.650	ENSGACG00000011703	urb1	99	74.650	Gasterosteus_aculeatus
ENSATEG00000011790	urb1	99	45.960	ENSGAGG00000022544	URB1	99	45.960	Gopherus_agassizii
ENSATEG00000011790	urb1	97	44.489	ENSGGOG00000000285	URB1	99	43.584	Gorilla_gorilla
ENSATEG00000011790	urb1	100	74.663	ENSHBUG00000001904	urb1	100	74.663	Haplochromis_burtoni
ENSATEG00000011790	urb1	97	43.695	ENSHGLG00000004907	URB1	98	43.651	Heterocephalus_glaber_female
ENSATEG00000011790	urb1	97	44.055	ENSHGLG00100010749	URB1	98	44.011	Heterocephalus_glaber_male
ENSATEG00000011790	urb1	71	71.747	ENSHCOG00000018683	urb1	98	71.747	Hippocampus_comes
ENSATEG00000011790	urb1	99	48.384	ENSIPUG00000014721	urb1	99	48.557	Ictalurus_punctatus
ENSATEG00000011790	urb1	96	44.913	ENSSTOG00000004539	URB1	98	44.962	Ictidomys_tridecemlineatus
ENSATEG00000011790	urb1	90	76.056	ENSKMAG00000006001	urb1	97	75.965	Kryptolebias_marmoratus
ENSATEG00000011790	urb1	97	69.344	ENSLBEG00000027208	urb1	99	69.344	Labrus_bergylta
ENSATEG00000011790	urb1	99	43.811	ENSLACG00000017059	URB1	99	43.854	Latimeria_chalumnae
ENSATEG00000011790	urb1	100	52.800	ENSLOCG00000009190	urb1	100	52.800	Lepisosteus_oculatus
ENSATEG00000011790	urb1	96	45.058	ENSLAFG00000010407	URB1	98	45.058	Loxodonta_africana
ENSATEG00000011790	urb1	97	44.400	ENSMFAG00000034391	URB1	97	43.584	Macaca_fascicularis
ENSATEG00000011790	urb1	97	44.356	ENSMMUG00000010295	URB1	99	43.541	Macaca_mulatta
ENSATEG00000011790	urb1	97	43.528	ENSMNEG00000032981	URB1	99	42.900	Macaca_nemestrina
ENSATEG00000011790	urb1	97	44.642	ENSMLEG00000041435	URB1	99	43.817	Mandrillus_leucophaeus
ENSATEG00000011790	urb1	99	74.164	ENSMAMG00000011238	urb1	99	74.164	Mastacembelus_armatus
ENSATEG00000011790	urb1	100	67.703	ENSMZEG00005011862	urb1	100	67.703	Maylandia_zebra
ENSATEG00000011790	urb1	95	46.192	ENSMGAG00000014512	URB1	98	46.507	Meleagris_gallopavo
ENSATEG00000011790	urb1	90	52.859	ENSMAUG00000010516	Urb1	98	52.859	Mesocricetus_auratus
ENSATEG00000011790	urb1	97	44.282	ENSMICG00000016424	URB1	98	44.400	Microcebus_murinus
ENSATEG00000011790	urb1	97	42.977	ENSMOCG00000012613	Urb1	98	43.248	Microtus_ochrogaster
ENSATEG00000011790	urb1	99	43.267	ENSMODG00000021076	URB1	99	43.267	Monodelphis_domestica
ENSATEG00000011790	urb1	99	74.142	ENSMALG00000017411	urb1	99	74.142	Monopterus_albus
ENSATEG00000011790	urb1	96	43.484	MGP_CAROLIEiJ_G0020948	Urb1	97	43.484	Mus_caroli
ENSATEG00000011790	urb1	96	43.221	ENSMUSG00000039929	Urb1	97	43.221	Mus_musculus
ENSATEG00000011790	urb1	96	43.826	MGP_PahariEiJ_G0016653	Urb1	97	43.826	Mus_pahari
ENSATEG00000011790	urb1	96	43.498	MGP_SPRETEiJ_G0021854	Urb1	97	43.498	Mus_spretus
ENSATEG00000011790	urb1	96	44.509	ENSMPUG00000001123	URB1	98	44.554	Mustela_putorius_furo
ENSATEG00000011790	urb1	97	43.268	ENSNGAG00000001905	Urb1	98	43.268	Nannospalax_galili
ENSATEG00000011790	urb1	82	70.588	ENSNBRG00000001049	urb1	99	70.588	Neolamprologus_brichardi
ENSATEG00000011790	urb1	96	42.927	ENSNLEG00000026872	URB1	99	42.038	Nomascus_leucogenys
ENSATEG00000011790	urb1	92	45.471	ENSMEUG00000010828	URB1	95	39.963	Notamacropus_eugenii
ENSATEG00000011790	urb1	99	41.825	ENSOPRG00000013482	URB1	99	41.825	Ochotona_princeps
ENSATEG00000011790	urb1	97	44.278	ENSODEG00000002587	URB1	98	44.166	Octodon_degus
ENSATEG00000011790	urb1	100	74.935	ENSONIG00000005599	urb1	100	74.935	Oreochromis_niloticus
ENSATEG00000011790	urb1	99	44.125	ENSOCUG00000009381	URB1	99	44.168	Oryctolagus_cuniculus
ENSATEG00000011790	urb1	99	67.899	ENSORLG00000003429	urb1	99	67.899	Oryzias_latipes
ENSATEG00000011790	urb1	99	67.420	ENSORLG00020013785	urb1	99	68.508	Oryzias_latipes_hni
ENSATEG00000011790	urb1	93	73.407	ENSORLG00015019421	urb1	99	73.407	Oryzias_latipes_hsok
ENSATEG00000011790	urb1	81	66.930	ENSOMEG00000002094	urb1	99	66.930	Oryzias_melastigma
ENSATEG00000011790	urb1	99	43.881	ENSOGAG00000017140	URB1	99	43.881	Otolemur_garnettii
ENSATEG00000011790	urb1	92	47.950	ENSOARG00000013679	URB1	97	47.950	Ovis_aries
ENSATEG00000011790	urb1	97	44.222	ENSPPAG00000003423	URB1	99	43.328	Pan_paniscus
ENSATEG00000011790	urb1	96	44.346	ENSPPRG00000023131	URB1	98	44.346	Panthera_pardus
ENSATEG00000011790	urb1	87	45.360	ENSPTIG00000016125	URB1	95	45.360	Panthera_tigris_altaica
ENSATEG00000011790	urb1	97	44.133	ENSPTRG00000013852	URB1	99	43.242	Pan_troglodytes
ENSATEG00000011790	urb1	97	44.553	ENSPANG00000021964	URB1	98	44.642	Papio_anubis
ENSATEG00000011790	urb1	99	52.420	ENSPKIG00000003683	urb1	99	52.509	Paramormyrops_kingsleyae
ENSATEG00000011790	urb1	97	43.530	ENSPEMG00000021205	Urb1	97	43.530	Peromyscus_maniculatus_bairdii
ENSATEG00000011790	urb1	76	32.615	ENSPMAG00000009733	URB1	99	33.297	Petromyzon_marinus
ENSATEG00000011790	urb1	99	42.807	ENSPCIG00000016350	URB1	99	43.240	Phascolarctos_cinereus
ENSATEG00000011790	urb1	95	70.698	ENSPLAG00000004371	urb1	100	70.698	Poecilia_latipinna
ENSATEG00000011790	urb1	100	69.752	ENSPMEG00000006634	urb1	100	69.752	Poecilia_mexicana
ENSATEG00000011790	urb1	100	69.344	ENSPREG00000013453	urb1	100	69.344	Poecilia_reticulata
ENSATEG00000011790	urb1	96	44.271	ENSPPYG00000011359	URB1	98	44.222	Pongo_abelii
ENSATEG00000011790	urb1	96	40.089	ENSPCAG00000007430	URB1	97	40.142	Procavia_capensis
ENSATEG00000011790	urb1	99	43.629	ENSPCOG00000022695	URB1	99	43.501	Propithecus_coquereli
ENSATEG00000011790	urb1	96	43.950	ENSPVAG00000000889	URB1	98	43.950	Pteropus_vampyrus
ENSATEG00000011790	urb1	100	70.703	ENSPNYG00000010589	urb1	100	70.703	Pundamilia_nyererei
ENSATEG00000011790	urb1	99	49.265	ENSPNAG00000019324	urb1	99	49.481	Pygocentrus_nattereri
ENSATEG00000011790	urb1	97	43.478	ENSRNOG00000002080	Urb1	98	43.501	Rattus_norvegicus
ENSATEG00000011790	urb1	97	44.296	ENSRBIG00000033122	URB1	99	43.469	Rhinopithecus_bieti
ENSATEG00000011790	urb1	97	44.227	ENSRROG00000040237	URB1	99	43.402	Rhinopithecus_roxellana
ENSATEG00000011790	urb1	97	44.400	ENSSBOG00000027672	URB1	99	43.637	Saimiri_boliviensis_boliviensis
ENSATEG00000011790	urb1	99	43.601	ENSSHAG00000005140	URB1	99	43.644	Sarcophilus_harrisii
ENSATEG00000011790	urb1	93	55.400	ENSSFOG00015000339	urb1	99	55.400	Scleropages_formosus
ENSATEG00000011790	urb1	100	77.373	ENSSMAG00000003782	urb1	100	77.460	Scophthalmus_maximus
ENSATEG00000011790	urb1	100	81.652	ENSSDUG00000012313	urb1	99	81.652	Seriola_dumerili
ENSATEG00000011790	urb1	100	81.130	ENSSLDG00000023179	urb1	99	81.130	Seriola_lalandi_dorsalis
ENSATEG00000011790	urb1	99	44.369	ENSSPUG00000012447	URB1	100	44.369	Sphenodon_punctatus
ENSATEG00000011790	urb1	99	76.376	ENSSPAG00000006325	urb1	99	76.376	Stegastes_partitus
ENSATEG00000011790	urb1	96	43.767	ENSSSCG00000032024	URB1	98	43.811	Sus_scrofa
ENSATEG00000011790	urb1	72	47.919	ENSTGUG00000013442	URB1	100	47.919	Taeniopygia_guttata
ENSATEG00000011790	urb1	100	69.913	ENSTRUG00000009372	urb1	100	69.913	Takifugu_rubripes
ENSATEG00000011790	urb1	99	67.498	ENSTNIG00000016277	urb1	99	67.498	Tetraodon_nigroviridis
ENSATEG00000011790	urb1	78	48.997	ENSTBEG00000010044	URB1	78	48.997	Tupaia_belangeri
ENSATEG00000011790	urb1	89	49.281	ENSTTRG00000007712	URB1	91	49.284	Tursiops_truncatus
ENSATEG00000011790	urb1	96	44.676	ENSUAMG00000012231	URB1	97	44.676	Ursus_americanus
ENSATEG00000011790	urb1	86	46.790	ENSUMAG00000017419	URB1	95	45.391	Ursus_maritimus
ENSATEG00000011790	urb1	62	70.833	ENSVPAG00000001164	URB1	66	70.833	Vicugna_pacos
ENSATEG00000011790	urb1	99	43.182	ENSVVUG00000000551	URB1	99	43.182	Vulpes_vulpes
ENSATEG00000011790	urb1	99	43.313	ENSXETG00000009895	urb1	99	43.046	Xenopus_tropicalis
ENSATEG00000011790	urb1	100	65.233	ENSXCOG00000005500	urb1	100	65.233	Xiphophorus_couchianus
ENSATEG00000011790	urb1	100	65.826	ENSXMAG00000007253	urb1	100	65.826	Xiphophorus_maculatus