EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000011794 (Gene tree)
Gene ID: 113152945
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 5120 bases
Position: chrOOHO01000016.1:14980086-14985205
Accession: 113152945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000016944	MMR_HSR1	PF01926.23	1.1e-13	1	1
ENSATEP00000016963	MMR_HSR1	PF01926.23	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000017230	-	2922	-	ENSATEP00000016944	579 (aa)	-	-
ENSATET00000017249	-	2803	-	ENSATEP00000016963	630 (aa)	XP_026202266	UPI000E464934

Gene Model

Click here to download ENSATEG00000011794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000011794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000011794	lsg1	72	32.319	ENSATEG00000020647	gnl1	65	31.935
ENSATEG00000011794	lsg1	56	32.258	ENSATEG00000009762	gnl3l	51	35.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000011794	lsg1	99	64.992	ENSG00000041802	LSG1	90	77.019	Homo_sapiens
ENSATEG00000011794	lsg1	100	82.019	ENSAPOG00000009694	lsg1	99	82.126	Acanthochromis_polyacanthus
ENSATEG00000011794	lsg1	100	62.519	ENSAMEG00000009343	LSG1	98	62.923	Ailuropoda_melanoleuca
ENSATEG00000011794	lsg1	98	81.833	ENSACIG00000012406	lsg1	98	81.994	Amphilophus_citrinellus
ENSATEG00000011794	lsg1	100	81.546	ENSAOCG00000016066	lsg1	99	82.126	Amphiprion_ocellaris
ENSATEG00000011794	lsg1	100	82.177	ENSAPEG00000003252	lsg1	99	82.287	Amphiprion_percula
ENSATEG00000011794	lsg1	94	62.872	ENSACAG00000004222	LSG1	100	61.661	Anolis_carolinensis
ENSATEG00000011794	lsg1	99	65.145	ENSANAG00000021153	LSG1	98	65.528	Aotus_nancymaae
ENSATEG00000011794	lsg1	100	82.589	ENSACLG00000000520	lsg1	98	82.704	Astatotilapia_calliptera
ENSATEG00000011794	lsg1	100	72.685	ENSAMXG00000008271	lsg1	98	73.543	Astyanax_mexicanus
ENSATEG00000011794	lsg1	99	65.802	ENSBTAG00000008461	LSG1	98	65.576	Bos_taurus
ENSATEG00000011794	lsg1	80	46.288	WBGene00016907	C53H9.2	77	54.762	Caenorhabditis_elegans
ENSATEG00000011794	lsg1	99	64.653	ENSCJAG00000013962	LSG1	98	65.023	Callithrix_jacchus
ENSATEG00000011794	lsg1	95	63.365	ENSCAFG00000013445	LSG1	100	64.058	Canis_familiaris
ENSATEG00000011794	lsg1	100	62.351	ENSCAFG00020002216	LSG1	99	63.826	Canis_lupus_dingo
ENSATEG00000011794	lsg1	100	63.444	ENSCHIG00000015769	LSG1	98	65.197	Capra_hircus
ENSATEG00000011794	lsg1	99	65.158	ENSTSYG00000001447	LSG1	98	65.123	Carlito_syrichta
ENSATEG00000011794	lsg1	95	66.172	ENSCAPG00000009856	LSG1	99	66.172	Cavia_aperea
ENSATEG00000011794	lsg1	99	64.048	ENSCCAG00000035744	LSG1	98	64.506	Cebus_capucinus
ENSATEG00000011794	lsg1	99	65.350	ENSCATG00000042060	LSG1	98	64.752	Cercocebus_atys
ENSATEG00000011794	lsg1	99	65.198	ENSCSAG00000008796	LSG1	90	65.528	Chlorocebus_sabaeus
ENSATEG00000011794	lsg1	100	65.559	ENSCPBG00000015941	LSG1	82	64.969	Chrysemys_picta_bellii
ENSATEG00000011794	lsg1	83	54.321	ENSCING00000007079	-	92	60.204	Ciona_intestinalis
ENSATEG00000011794	lsg1	92	49.153	ENSCSAVG00000002514	-	96	53.750	Ciona_savignyi
ENSATEG00000011794	lsg1	99	63.897	ENSCANG00000030709	LSG1	98	64.715	Colobus_angolensis_palliatus
ENSATEG00000011794	lsg1	99	65.991	ENSCGRG00001019846	Lsg1	98	66.349	Cricetulus_griseus_chok1gshd
ENSATEG00000011794	lsg1	99	65.745	ENSCGRG00000014617	Lsg1	98	66.094	Cricetulus_griseus_crigri
ENSATEG00000011794	lsg1	98	79.403	ENSCSEG00000008522	lsg1	98	79.403	Cynoglossus_semilaevis
ENSATEG00000011794	lsg1	96	83.813	ENSCVAG00000002484	lsg1	98	82.848	Cyprinodon_variegatus
ENSATEG00000011794	lsg1	100	75.194	ENSDARG00000015352	lsg1	98	75.917	Danio_rerio
ENSATEG00000011794	lsg1	99	64.590	ENSDNOG00000006224	LSG1	98	64.806	Dasypus_novemcinctus
ENSATEG00000011794	lsg1	99	50.000	FBgn0266284	Ns3	98	49.840	Drosophila_melanogaster
ENSATEG00000011794	lsg1	88	76.000	ENSETEG00000003888	LSG1	87	79.032	Echinops_telfairi
ENSATEG00000011794	lsg1	88	57.216	ENSEBUG00000003119	lsg1	85	57.216	Eptatretus_burgeri
ENSATEG00000011794	lsg1	99	65.611	ENSEASG00005000678	LSG1	98	65.902	Equus_asinus_asinus
ENSATEG00000011794	lsg1	99	64.555	ENSECAG00000017659	LSG1	98	66.049	Equus_caballus
ENSATEG00000011794	lsg1	86	60.684	ENSEEUG00000015217	LSG1	85	60.684	Erinaceus_europaeus
ENSATEG00000011794	lsg1	100	74.495	ENSELUG00000023973	lsg1	98	73.968	Esox_lucius
ENSATEG00000011794	lsg1	100	64.599	ENSFCAG00000024957	LSG1	98	64.706	Felis_catus
ENSATEG00000011794	lsg1	92	62.561	ENSFALG00000007210	LSG1	94	62.825	Ficedula_albicollis
ENSATEG00000011794	lsg1	99	64.852	ENSFDAG00000017373	LSG1	98	65.079	Fukomys_damarensis
ENSATEG00000011794	lsg1	97	81.833	ENSFHEG00000003680	lsg1	98	82.080	Fundulus_heteroclitus
ENSATEG00000011794	lsg1	98	71.704	ENSGMOG00000015834	lsg1	87	79.151	Gadus_morhua
ENSATEG00000011794	lsg1	99	61.203	ENSGALG00000007058	LSG1	86	61.824	Gallus_gallus
ENSATEG00000011794	lsg1	97	82.258	ENSGAFG00000015831	lsg1	98	82.504	Gambusia_affinis
ENSATEG00000011794	lsg1	98	82.080	ENSGACG00000009323	lsg1	98	81.440	Gasterosteus_aculeatus
ENSATEG00000011794	lsg1	99	64.840	ENSGGOG00000000520	LSG1	98	65.217	Gorilla_gorilla
ENSATEG00000011794	lsg1	100	83.619	ENSHBUG00000005659	lsg1	98	83.758	Haplochromis_burtoni
ENSATEG00000011794	lsg1	99	63.495	ENSHGLG00000017390	LSG1	98	63.565	Heterocephalus_glaber_female
ENSATEG00000011794	lsg1	99	63.495	ENSHGLG00100018587	LSG1	98	63.565	Heterocephalus_glaber_male
ENSATEG00000011794	lsg1	97	81.731	ENSHCOG00000016848	lsg1	98	81.659	Hippocampus_comes
ENSATEG00000011794	lsg1	100	75.276	ENSIPUG00000008631	lsg1	98	75.362	Ictalurus_punctatus
ENSATEG00000011794	lsg1	75	59.681	ENSSTOG00000010234	LSG1	92	59.880	Ictidomys_tridecemlineatus
ENSATEG00000011794	lsg1	99	66.301	ENSJJAG00000015513	Lsg1	98	65.561	Jaculus_jaculus
ENSATEG00000011794	lsg1	98	77.512	ENSKMAG00000009681	lsg1	98	77.352	Kryptolebias_marmoratus
ENSATEG00000011794	lsg1	98	82.391	ENSLBEG00000024261	lsg1	98	81.906	Labrus_bergylta
ENSATEG00000011794	lsg1	100	67.117	ENSLACG00000013399	LSG1	98	66.922	Latimeria_chalumnae
ENSATEG00000011794	lsg1	98	73.041	ENSLOCG00000004918	lsg1	98	72.586	Lepisosteus_oculatus
ENSATEG00000011794	lsg1	99	64.606	ENSLAFG00000012919	-	98	63.651	Loxodonta_africana
ENSATEG00000011794	lsg1	99	64.992	ENSMFAG00000039903	LSG1	98	64.596	Macaca_fascicularis
ENSATEG00000011794	lsg1	99	65.198	ENSMMUG00000010708	LSG1	98	65.683	Macaca_mulatta
ENSATEG00000011794	lsg1	99	64.992	ENSMNEG00000031538	LSG1	98	64.596	Macaca_nemestrina
ENSATEG00000011794	lsg1	99	65.653	ENSMLEG00000041184	LSG1	98	65.683	Mandrillus_leucophaeus
ENSATEG00000011794	lsg1	100	83.150	ENSMAMG00000000470	lsg1	98	83.441	Mastacembelus_armatus
ENSATEG00000011794	lsg1	100	83.619	ENSMZEG00005017865	lsg1	98	83.758	Maylandia_zebra
ENSATEG00000011794	lsg1	88	62.818	ENSMGAG00000007050	LSG1	99	62.818	Meleagris_gallopavo
ENSATEG00000011794	lsg1	99	64.796	ENSMAUG00000016976	Lsg1	97	61.889	Mesocricetus_auratus
ENSATEG00000011794	lsg1	99	64.286	ENSMICG00000049087	LSG1	98	64.386	Microcebus_murinus
ENSATEG00000011794	lsg1	99	64.969	ENSMOCG00000022136	Lsg1	98	64.386	Microtus_ochrogaster
ENSATEG00000011794	lsg1	87	89.167	ENSMMOG00000008884	lsg1	98	77.544	Mola_mola
ENSATEG00000011794	lsg1	99	55.573	ENSMODG00000019828	LSG1	98	55.385	Monodelphis_domestica
ENSATEG00000011794	lsg1	100	67.183	MGP_CAROLIEiJ_G0020648	Lsg1	98	66.351	Mus_caroli
ENSATEG00000011794	lsg1	100	65.944	ENSMUSG00000022538	Lsg1	98	66.035	Mus_musculus
ENSATEG00000011794	lsg1	98	65.781	MGP_PahariEiJ_G0016352	Lsg1	98	65.777	Mus_pahari
ENSATEG00000011794	lsg1	100	66.099	MGP_SPRETEiJ_G0021544	Lsg1	98	66.193	Mus_spretus
ENSATEG00000011794	lsg1	100	64.188	ENSMPUG00000003734	LSG1	98	64.396	Mustela_putorius_furo
ENSATEG00000011794	lsg1	100	65.038	ENSMLUG00000012548	LSG1	98	64.798	Myotis_lucifugus
ENSATEG00000011794	lsg1	99	64.923	ENSNGAG00000021872	Lsg1	98	64.678	Nannospalax_galili
ENSATEG00000011794	lsg1	99	64.804	ENSNLEG00000008293	LSG1	98	64.869	Nomascus_leucogenys
ENSATEG00000011794	lsg1	69	72.165	ENSMEUG00000009041	-	85	72.165	Notamacropus_eugenii
ENSATEG00000011794	lsg1	100	82.663	ENSONIG00000002635	lsg1	98	83.412	Oreochromis_niloticus
ENSATEG00000011794	lsg1	95	65.764	ENSOANG00000012742	LSG1	99	65.287	Ornithorhynchus_anatinus
ENSATEG00000011794	lsg1	99	65.053	ENSOCUG00000004817	LSG1	98	65.325	Oryctolagus_cuniculus
ENSATEG00000011794	lsg1	98	79.968	ENSORLG00000007695	lsg1	98	79.968	Oryzias_latipes
ENSATEG00000011794	lsg1	98	80.452	ENSORLG00020016286	lsg1	98	80.452	Oryzias_latipes_hni
ENSATEG00000011794	lsg1	98	79.483	ENSORLG00015012025	lsg1	98	79.645	Oryzias_latipes_hsok
ENSATEG00000011794	lsg1	98	78.871	ENSOMEG00000022379	lsg1	98	79.032	Oryzias_melastigma
ENSATEG00000011794	lsg1	99	64.599	ENSOGAG00000003475	LSG1	98	64.969	Otolemur_garnettii
ENSATEG00000011794	lsg1	100	63.229	ENSOARG00000020403	LSG1	98	64.953	Ovis_aries
ENSATEG00000011794	lsg1	99	64.992	ENSPPAG00000029271	LSG1	98	65.062	Pan_paniscus
ENSATEG00000011794	lsg1	100	63.772	ENSPPRG00000010281	LSG1	98	63.859	Panthera_pardus
ENSATEG00000011794	lsg1	100	64.599	ENSPTIG00000010789	LSG1	98	64.706	Panthera_tigris_altaica
ENSATEG00000011794	lsg1	99	64.992	ENSPTRG00000015760	LSG1	98	65.062	Pan_troglodytes
ENSATEG00000011794	lsg1	99	65.350	ENSPANG00000018249	LSG1	98	64.752	Papio_anubis
ENSATEG00000011794	lsg1	99	71.900	ENSPKIG00000002895	lsg1	98	73.034	Paramormyrops_kingsleyae
ENSATEG00000011794	lsg1	96	62.520	ENSPSIG00000009821	LSG1	99	62.362	Pelodiscus_sinensis
ENSATEG00000011794	lsg1	95	78.642	ENSPMGG00000000931	lsg1	100	78.642	Periophthalmus_magnuspinnatus
ENSATEG00000011794	lsg1	99	64.516	ENSPEMG00000012082	-	98	64.186	Peromyscus_maniculatus_bairdii
ENSATEG00000011794	lsg1	99	60.741	ENSPMAG00000007451	lsg1	98	60.725	Petromyzon_marinus
ENSATEG00000011794	lsg1	98	66.316	ENSPCIG00000013890	LSG1	80	66.316	Phascolarctos_cinereus
ENSATEG00000011794	lsg1	97	82.770	ENSPFOG00000021882	lsg1	98	83.013	Poecilia_formosa
ENSATEG00000011794	lsg1	97	81.965	ENSPLAG00000019536	lsg1	98	82.212	Poecilia_latipinna
ENSATEG00000011794	lsg1	97	81.701	ENSPMEG00000017281	lsg1	98	81.949	Poecilia_mexicana
ENSATEG00000011794	lsg1	97	71.497	ENSPREG00000006048	lsg1	98	71.791	Poecilia_reticulata
ENSATEG00000011794	lsg1	99	64.426	ENSPPYG00000014425	LSG1	98	63.926	Pongo_abelii
ENSATEG00000011794	lsg1	89	73.333	ENSPCAG00000005511	LSG1	80	77.419	Procavia_capensis
ENSATEG00000011794	lsg1	99	63.994	ENSPCOG00000012360	LSG1	98	63.932	Propithecus_coquereli
ENSATEG00000011794	lsg1	100	82.589	ENSPNYG00000021994	lsg1	98	82.704	Pundamilia_nyererei
ENSATEG00000011794	lsg1	100	75.428	ENSPNAG00000015533	lsg1	98	75.556	Pygocentrus_nattereri
ENSATEG00000011794	lsg1	100	65.753	ENSRNOG00000001727	Lsg1	98	65.741	Rattus_norvegicus
ENSATEG00000011794	lsg1	99	65.145	ENSRBIG00000029053	LSG1	98	65.474	Rhinopithecus_bieti
ENSATEG00000011794	lsg1	99	64.939	ENSRROG00000037702	LSG1	98	65.474	Rhinopithecus_roxellana
ENSATEG00000011794	lsg1	89	42.243	YGL099W	LSG1	70	44.135	Saccharomyces_cerevisiae
ENSATEG00000011794	lsg1	99	64.955	ENSSBOG00000034938	LSG1	98	65.485	Saimiri_boliviensis_boliviensis
ENSATEG00000011794	lsg1	77	62.572	ENSSHAG00000003487	LSG1	100	62.572	Sarcophilus_harrisii
ENSATEG00000011794	lsg1	98	74.281	ENSSFOG00015008955	lsg1	98	74.281	Scleropages_formosus
ENSATEG00000011794	lsg1	98	87.619	ENSSDUG00000004622	lsg1	98	86.667	Seriola_dumerili
ENSATEG00000011794	lsg1	98	86.817	ENSSLDG00000010869	lsg1	98	86.174	Seriola_lalandi_dorsalis
ENSATEG00000011794	lsg1	82	68.389	ENSSARG00000012981	LSG1	80	64.986	Sorex_araneus
ENSATEG00000011794	lsg1	100	65.449	ENSSPUG00000016347	LSG1	98	65.319	Sphenodon_punctatus
ENSATEG00000011794	lsg1	100	78.583	ENSSPAG00000005508	lsg1	99	80.547	Stegastes_partitus
ENSATEG00000011794	lsg1	100	64.142	ENSSSCG00000011827	LSG1	98	64.038	Sus_scrofa
ENSATEG00000011794	lsg1	88	60.496	ENSTGUG00000009068	LSG1	100	61.474	Taeniopygia_guttata
ENSATEG00000011794	lsg1	97	75.321	ENSTRUG00000017380	lsg1	98	75.439	Takifugu_rubripes
ENSATEG00000011794	lsg1	97	79.073	ENSTNIG00000015570	lsg1	98	79.809	Tetraodon_nigroviridis
ENSATEG00000011794	lsg1	91	73.333	ENSTTRG00000000559	LSG1	89	73.333	Tursiops_truncatus
ENSATEG00000011794	lsg1	100	63.348	ENSUAMG00000012454	LSG1	98	63.622	Ursus_americanus
ENSATEG00000011794	lsg1	100	63.348	ENSUMAG00000000855	LSG1	98	63.622	Ursus_maritimus
ENSATEG00000011794	lsg1	95	61.722	ENSVPAG00000012400	LSG1	100	61.244	Vicugna_pacos
ENSATEG00000011794	lsg1	95	62.461	ENSVVUG00000008956	LSG1	98	62.754	Vulpes_vulpes
ENSATEG00000011794	lsg1	100	66.411	ENSXETG00000003451	lsg1	98	66.352	Xenopus_tropicalis
ENSATEG00000011794	lsg1	97	82.391	ENSXCOG00000003239	lsg1	98	82.797	Xiphophorus_couchianus
ENSATEG00000011794	lsg1	96	82.363	ENSXMAG00000005536	lsg1	98	80.560	Xiphophorus_maculatus