EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000012140 (Gene tree)
Gene ID: 113155297
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 6901 bases
Position: chrOOHO01000017.1:44274603-44281503
Accession: 113155297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000017438	RRM_1	PF00076.22	4.3e-24	1	2
ENSATEP00000017438	RRM_1	PF00076.22	4.3e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000017730	-	3317	-	ENSATEP00000017438	315 (aa)	XP_026205703	UPI000E462A4C

Gene Model

Click here to download ENSATEG00000012140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000012140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000012140	trnau1apa	56	32.044	ENSATEG00000014593	-	59	32.222
ENSATEG00000012140	trnau1apa	94	40.462	ENSATEG00000002196	trnau1apb	96	43.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000012140	trnau1apa	98	56.270	ENSG00000180098	TRNAU1AP	98	58.199	Homo_sapiens
ENSATEG00000012140	trnau1apa	100	86.435	ENSAPOG00000007148	TRNAU1AP	100	87.697	Acanthochromis_polyacanthus
ENSATEG00000012140	trnau1apa	98	56.592	ENSAMEG00000011367	TRNAU1AP	98	58.199	Ailuropoda_melanoleuca
ENSATEG00000012140	trnau1apa	91	94.681	ENSACIG00000004161	trnau1apa	93	94.681	Amphilophus_citrinellus
ENSATEG00000012140	trnau1apa	100	86.392	ENSAOCG00000008056	trnau1apa	100	87.658	Amphiprion_ocellaris
ENSATEG00000012140	trnau1apa	100	86.392	ENSAPEG00000008868	trnau1apa	100	87.658	Amphiprion_percula
ENSATEG00000012140	trnau1apa	92	56.997	ENSAPLG00000002606	TRNAU1AP	99	59.044	Anas_platyrhynchos
ENSATEG00000012140	trnau1apa	93	48.311	ENSACAG00000003995	-	95	49.329	Anolis_carolinensis
ENSATEG00000012140	trnau1apa	73	34.483	ENSACAG00000004205	-	80	36.638	Anolis_carolinensis
ENSATEG00000012140	trnau1apa	98	56.270	ENSANAG00000018976	TRNAU1AP	98	58.199	Aotus_nancymaae
ENSATEG00000012140	trnau1apa	100	82.911	ENSACLG00000018515	trnau1apa	100	83.228	Astatotilapia_calliptera
ENSATEG00000012140	trnau1apa	92	69.892	ENSAMXG00000029240	-	95	69.892	Astyanax_mexicanus
ENSATEG00000012140	trnau1apa	99	52.960	ENSAMXG00000013750	trnau1apa	97	52.960	Astyanax_mexicanus
ENSATEG00000012140	trnau1apa	98	55.949	ENSBTAG00000010393	TRNAU1AP	98	57.878	Bos_taurus
ENSATEG00000012140	trnau1apa	98	56.270	ENSCJAG00000009717	TRNAU1AP	98	58.199	Callithrix_jacchus
ENSATEG00000012140	trnau1apa	98	56.270	ENSCAFG00000011735	TRNAU1AP	96	59.732	Canis_familiaris
ENSATEG00000012140	trnau1apa	98	56.270	ENSCAFG00020023584	TRNAU1AP	96	59.732	Canis_lupus_dingo
ENSATEG00000012140	trnau1apa	99	55.732	ENSCHIG00000023215	TRNAU1AP	99	57.643	Capra_hircus
ENSATEG00000012140	trnau1apa	98	56.270	ENSTSYG00000003506	TRNAU1AP	96	59.732	Carlito_syrichta
ENSATEG00000012140	trnau1apa	98	56.270	ENSCPOG00000001925	TRNAU1AP	96	59.732	Cavia_porcellus
ENSATEG00000012140	trnau1apa	98	56.270	ENSCCAG00000037506	TRNAU1AP	98	58.199	Cebus_capucinus
ENSATEG00000012140	trnau1apa	98	56.270	ENSCATG00000044617	TRNAU1AP	98	58.199	Cercocebus_atys
ENSATEG00000012140	trnau1apa	98	56.270	ENSCLAG00000008223	TRNAU1AP	96	59.732	Chinchilla_lanigera
ENSATEG00000012140	trnau1apa	98	56.270	ENSCSAG00000001014	TRNAU1AP	98	58.199	Chlorocebus_sabaeus
ENSATEG00000012140	trnau1apa	95	53.974	ENSCPBG00000000121	TRNAU1AP	99	56.187	Chrysemys_picta_bellii
ENSATEG00000012140	trnau1apa	56	47.191	ENSCSAVG00000011781	-	89	47.429	Ciona_savignyi
ENSATEG00000012140	trnau1apa	98	48.232	ENSCANG00000041949	TRNAU1AP	98	53.030	Colobus_angolensis_palliatus
ENSATEG00000012140	trnau1apa	98	56.270	ENSCGRG00001004713	Trnau1ap	98	58.199	Cricetulus_griseus_chok1gshd
ENSATEG00000012140	trnau1apa	98	56.270	ENSCGRG00000014532	Trnau1ap	98	58.199	Cricetulus_griseus_crigri
ENSATEG00000012140	trnau1apa	100	78.683	ENSCSEG00000006663	trnau1apa	100	78.997	Cynoglossus_semilaevis
ENSATEG00000012140	trnau1apa	99	78.344	ENSCVAG00000018069	trnau1apa	99	79.618	Cyprinodon_variegatus
ENSATEG00000012140	trnau1apa	99	49.842	ENSDARG00000101323	trnau1apa	95	48.137	Danio_rerio
ENSATEG00000012140	trnau1apa	56	59.887	ENSDNOG00000047959	-	89	59.887	Dasypus_novemcinctus
ENSATEG00000012140	trnau1apa	98	56.270	ENSDNOG00000033009	TRNAU1AP	98	58.199	Dasypus_novemcinctus
ENSATEG00000012140	trnau1apa	98	53.871	ENSDORG00000006349	Trnau1ap	97	60.324	Dipodomys_ordii
ENSATEG00000012140	trnau1apa	93	35.866	FBgn0031607	CG15440	96	35.152	Drosophila_melanogaster
ENSATEG00000012140	trnau1apa	83	54.373	ENSETEG00000012594	TRNAU1AP	95	58.400	Echinops_telfairi
ENSATEG00000012140	trnau1apa	61	46.237	ENSEBUG00000006349	-	56	46.237	Eptatretus_burgeri
ENSATEG00000012140	trnau1apa	98	56.270	ENSEASG00005010062	TRNAU1AP	98	58.199	Equus_asinus_asinus
ENSATEG00000012140	trnau1apa	98	56.270	ENSECAG00000012980	TRNAU1AP	98	58.199	Equus_caballus
ENSATEG00000012140	trnau1apa	93	77.419	ENSELUG00000022790	-	93	77.419	Esox_lucius
ENSATEG00000012140	trnau1apa	100	73.101	ENSELUG00000017686	trnau1apa	100	74.843	Esox_lucius
ENSATEG00000012140	trnau1apa	98	56.270	ENSFCAG00000013401	TRNAU1AP	98	58.199	Felis_catus
ENSATEG00000012140	trnau1apa	95	55.000	ENSFALG00000001371	TRNAU1AP	99	57.191	Ficedula_albicollis
ENSATEG00000012140	trnau1apa	99	56.051	ENSFDAG00000018599	TRNAU1AP	99	57.962	Fukomys_damarensis
ENSATEG00000012140	trnau1apa	78	88.259	ENSFHEG00000018232	trnau1apa	86	86.312	Fundulus_heteroclitus
ENSATEG00000012140	trnau1apa	100	64.151	ENSGMOG00000016508	trnau1apa	99	64.151	Gadus_morhua
ENSATEG00000012140	trnau1apa	68	38.249	ENSGALG00000012721	C2H6orf52	90	37.218	Gallus_gallus
ENSATEG00000012140	trnau1apa	98	56.592	ENSGALG00000001310	-	98	57.235	Gallus_gallus
ENSATEG00000012140	trnau1apa	80	84.585	ENSGAFG00000004928	trnau1apa	97	83.650	Gambusia_affinis
ENSATEG00000012140	trnau1apa	100	87.302	ENSGACG00000001443	trnau1apa	100	87.619	Gasterosteus_aculeatus
ENSATEG00000012140	trnau1apa	95	55.518	ENSGAGG00000004940	TRNAU1AP	99	57.191	Gopherus_agassizii
ENSATEG00000012140	trnau1apa	98	56.270	ENSGGOG00000003511	TRNAU1AP	98	58.199	Gorilla_gorilla
ENSATEG00000012140	trnau1apa	100	93.571	ENSHBUG00000002510	trnau1apa	95	93.571	Haplochromis_burtoni
ENSATEG00000012140	trnau1apa	98	56.270	ENSHGLG00000010380	TRNAU1AP	96	59.732	Heterocephalus_glaber_female
ENSATEG00000012140	trnau1apa	98	54.341	ENSHGLG00100012699	TRNAU1AP	98	56.270	Heterocephalus_glaber_male
ENSATEG00000012140	trnau1apa	99	75.080	ENSHCOG00000014770	trnau1apa	99	73.802	Hippocampus_comes
ENSATEG00000012140	trnau1apa	98	56.270	ENSSTOG00000000079	TRNAU1AP	98	58.199	Ictidomys_tridecemlineatus
ENSATEG00000012140	trnau1apa	98	56.270	ENSJJAG00000010128	Trnau1ap	98	57.878	Jaculus_jaculus
ENSATEG00000012140	trnau1apa	100	84.494	ENSKMAG00000001230	trnau1apa	100	84.494	Kryptolebias_marmoratus
ENSATEG00000012140	trnau1apa	100	83.962	ENSLBEG00000011683	trnau1apa	100	83.648	Labrus_bergylta
ENSATEG00000012140	trnau1apa	99	49.206	ENSLACG00000005541	TRNAU1AP	99	52.050	Latimeria_chalumnae
ENSATEG00000012140	trnau1apa	98	60.450	ENSLOCG00000004041	trnau1apa	99	58.842	Lepisosteus_oculatus
ENSATEG00000012140	trnau1apa	98	56.592	ENSLAFG00000007628	TRNAU1AP	98	58.521	Loxodonta_africana
ENSATEG00000012140	trnau1apa	98	56.270	ENSMFAG00000043751	TRNAU1AP	98	58.199	Macaca_fascicularis
ENSATEG00000012140	trnau1apa	98	56.270	ENSMMUG00000006561	TRNAU1AP	98	58.199	Macaca_mulatta
ENSATEG00000012140	trnau1apa	98	56.270	ENSMNEG00000044201	TRNAU1AP	98	58.199	Macaca_nemestrina
ENSATEG00000012140	trnau1apa	98	56.270	ENSMLEG00000015649	TRNAU1AP	98	58.199	Mandrillus_leucophaeus
ENSATEG00000012140	trnau1apa	99	91.139	ENSMAMG00000001247	trnau1apa	100	91.139	Mastacembelus_armatus
ENSATEG00000012140	trnau1apa	100	82.911	ENSMZEG00005017722	trnau1apa	100	83.228	Maylandia_zebra
ENSATEG00000012140	trnau1apa	96	55.592	ENSMGAG00000002105	TRNAU1AP	99	56.436	Meleagris_gallopavo
ENSATEG00000012140	trnau1apa	98	56.270	ENSMICG00000008386	TRNAU1AP	98	58.199	Microcebus_murinus
ENSATEG00000012140	trnau1apa	98	56.270	ENSMOCG00000011189	Trnau1ap	98	58.199	Microtus_ochrogaster
ENSATEG00000012140	trnau1apa	100	72.013	ENSMMOG00000012107	trnau1apa	99	72.327	Mola_mola
ENSATEG00000012140	trnau1apa	98	56.913	ENSMODG00000010927	TRNAU1AP	98	56.774	Monodelphis_domestica
ENSATEG00000012140	trnau1apa	100	89.841	ENSMALG00000016778	trnau1apa	100	89.841	Monopterus_albus
ENSATEG00000012140	trnau1apa	98	56.270	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	58.199	Mus_caroli
ENSATEG00000012140	trnau1apa	98	56.270	ENSMUSG00000028898	Trnau1ap	98	58.199	Mus_musculus
ENSATEG00000012140	trnau1apa	98	56.270	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSATEG00000012140	trnau1apa	98	56.270	MGP_SPRETEiJ_G0027544	Trnau1ap	98	58.199	Mus_spretus
ENSATEG00000012140	trnau1apa	99	56.369	ENSMPUG00000015511	TRNAU1AP	99	58.280	Mustela_putorius_furo
ENSATEG00000012140	trnau1apa	98	56.270	ENSMLUG00000012586	TRNAU1AP	98	58.199	Myotis_lucifugus
ENSATEG00000012140	trnau1apa	98	56.913	ENSNGAG00000015881	Trnau1ap	98	57.742	Nannospalax_galili
ENSATEG00000012140	trnau1apa	100	71.787	ENSNBRG00000001758	trnau1apa	99	72.100	Neolamprologus_brichardi
ENSATEG00000012140	trnau1apa	98	56.270	ENSNLEG00000009822	TRNAU1AP	98	58.199	Nomascus_leucogenys
ENSATEG00000012140	trnau1apa	96	56.579	ENSMEUG00000006117	TRNAU1AP	99	56.436	Notamacropus_eugenii
ENSATEG00000012140	trnau1apa	57	60.870	ENSOPRG00000007084	-	55	61.039	Ochotona_princeps
ENSATEG00000012140	trnau1apa	98	56.270	ENSODEG00000002970	TRNAU1AP	96	59.732	Octodon_degus
ENSATEG00000012140	trnau1apa	80	85.259	ENSONIG00000004715	trnau1apa	95	85.657	Oreochromis_niloticus
ENSATEG00000012140	trnau1apa	95	45.033	ENSOANG00000005325	-	97	44.850	Ornithorhynchus_anatinus
ENSATEG00000012140	trnau1apa	98	54.984	ENSOCUG00000011704	-	96	58.389	Oryctolagus_cuniculus
ENSATEG00000012140	trnau1apa	98	47.910	ENSOCUG00000002353	-	98	47.910	Oryctolagus_cuniculus
ENSATEG00000012140	trnau1apa	86	47.810	ENSOCUG00000006834	-	98	46.154	Oryctolagus_cuniculus
ENSATEG00000012140	trnau1apa	100	77.215	ENSORLG00000010428	trnau1apa	100	79.114	Oryzias_latipes
ENSATEG00000012140	trnau1apa	100	77.215	ENSORLG00020000926	trnau1ap	100	79.114	Oryzias_latipes_hni
ENSATEG00000012140	trnau1apa	100	77.215	ENSORLG00015009858	trnau1ap	100	79.114	Oryzias_latipes_hsok
ENSATEG00000012140	trnau1apa	100	76.266	ENSOMEG00000007873	trnau1apa	100	77.848	Oryzias_melastigma
ENSATEG00000012140	trnau1apa	98	56.270	ENSOGAG00000002274	TRNAU1AP	98	58.199	Otolemur_garnettii
ENSATEG00000012140	trnau1apa	99	55.732	ENSOARG00000002843	TRNAU1AP	99	57.643	Ovis_aries
ENSATEG00000012140	trnau1apa	98	56.270	ENSPPAG00000033927	TRNAU1AP	98	58.199	Pan_paniscus
ENSATEG00000012140	trnau1apa	98	56.270	ENSPPRG00000004416	TRNAU1AP	98	58.199	Panthera_pardus
ENSATEG00000012140	trnau1apa	98	56.270	ENSPTIG00000016677	TRNAU1AP	98	58.199	Panthera_tigris_altaica
ENSATEG00000012140	trnau1apa	91	50.523	ENSPTRG00000000434	-	94	51.034	Pan_troglodytes
ENSATEG00000012140	trnau1apa	98	56.270	ENSPANG00000016019	TRNAU1AP	98	58.199	Papio_anubis
ENSATEG00000012140	trnau1apa	93	58.644	ENSPKIG00000015511	trnau1apa	93	57.966	Paramormyrops_kingsleyae
ENSATEG00000012140	trnau1apa	92	77.419	ENSPKIG00000022205	-	94	77.419	Paramormyrops_kingsleyae
ENSATEG00000012140	trnau1apa	95	56.333	ENSPSIG00000006864	TRNAU1AP	99	56.623	Pelodiscus_sinensis
ENSATEG00000012140	trnau1apa	99	68.269	ENSPMGG00000023893	trnau1apa	98	66.987	Periophthalmus_magnuspinnatus
ENSATEG00000012140	trnau1apa	98	55.949	ENSPEMG00000007877	Trnau1ap	98	57.878	Peromyscus_maniculatus_bairdii
ENSATEG00000012140	trnau1apa	55	52.247	ENSPMAG00000000592	trnau1apa	95	52.247	Petromyzon_marinus
ENSATEG00000012140	trnau1apa	75	49.789	ENSPMAG00000005934	trnau1apa	96	47.257	Petromyzon_marinus
ENSATEG00000012140	trnau1apa	99	79.936	ENSPFOG00000008100	trnau1apa	99	80.255	Poecilia_formosa
ENSATEG00000012140	trnau1apa	96	79.470	ENSPLAG00000010236	trnau1apa	99	79.801	Poecilia_latipinna
ENSATEG00000012140	trnau1apa	99	77.955	ENSPMEG00000016387	trnau1apa	97	78.275	Poecilia_mexicana
ENSATEG00000012140	trnau1apa	89	78.000	ENSPREG00000019821	trnau1apa	98	78.000	Poecilia_reticulata
ENSATEG00000012140	trnau1apa	89	48.239	ENSPPYG00000001639	-	96	51.661	Pongo_abelii
ENSATEG00000012140	trnau1apa	98	56.270	ENSPCOG00000027712	-	98	58.199	Propithecus_coquereli
ENSATEG00000012140	trnau1apa	97	44.444	ENSPCOG00000023470	-	96	47.782	Propithecus_coquereli
ENSATEG00000012140	trnau1apa	98	56.270	ENSPVAG00000017214	TRNAU1AP	98	58.199	Pteropus_vampyrus
ENSATEG00000012140	trnau1apa	100	84.494	ENSPNYG00000010130	trnau1apa	98	87.645	Pundamilia_nyererei
ENSATEG00000012140	trnau1apa	99	52.848	ENSPNAG00000024905	trnau1apa	97	51.411	Pygocentrus_nattereri
ENSATEG00000012140	trnau1apa	92	52.740	ENSRNOG00000055344	Trnau1ap	92	54.795	Rattus_norvegicus
ENSATEG00000012140	trnau1apa	98	56.270	ENSRBIG00000029083	TRNAU1AP	98	58.199	Rhinopithecus_bieti
ENSATEG00000012140	trnau1apa	98	56.270	ENSRROG00000029128	TRNAU1AP	98	58.199	Rhinopithecus_roxellana
ENSATEG00000012140	trnau1apa	98	56.270	ENSSBOG00000021299	TRNAU1AP	98	58.199	Saimiri_boliviensis_boliviensis
ENSATEG00000012140	trnau1apa	98	56.913	ENSSHAG00000008108	TRNAU1AP	98	56.774	Sarcophilus_harrisii
ENSATEG00000012140	trnau1apa	100	83.019	ENSSMAG00000020851	trnau1apa	100	84.591	Scophthalmus_maximus
ENSATEG00000012140	trnau1apa	100	88.125	ENSSDUG00000011734	trnau1apa	100	88.750	Seriola_dumerili
ENSATEG00000012140	trnau1apa	100	71.746	ENSSLDG00000012101	trnau1apa	99	71.746	Seriola_lalandi_dorsalis
ENSATEG00000012140	trnau1apa	96	56.250	ENSSARG00000007536	TRNAU1AP	99	58.224	Sorex_araneus
ENSATEG00000012140	trnau1apa	98	54.341	ENSSPUG00000010400	-	99	55.161	Sphenodon_punctatus
ENSATEG00000012140	trnau1apa	63	49.746	ENSSPUG00000010415	-	99	49.239	Sphenodon_punctatus
ENSATEG00000012140	trnau1apa	100	88.924	ENSSPAG00000005029	trnau1apa	100	89.241	Stegastes_partitus
ENSATEG00000012140	trnau1apa	98	56.270	ENSSSCG00000030284	TRNAU1AP	98	58.199	Sus_scrofa
ENSATEG00000012140	trnau1apa	96	55.592	ENSTGUG00000000735	-	99	57.237	Taeniopygia_guttata
ENSATEG00000012140	trnau1apa	68	40.092	ENSTGUG00000005908	-	99	40.807	Taeniopygia_guttata
ENSATEG00000012140	trnau1apa	100	81.587	ENSTRUG00000003352	trnau1apa	100	81.270	Takifugu_rubripes
ENSATEG00000012140	trnau1apa	100	79.048	ENSTNIG00000006129	trnau1apa	100	79.048	Tetraodon_nigroviridis
ENSATEG00000012140	trnau1apa	79	53.200	ENSTBEG00000008049	-	95	54.800	Tupaia_belangeri
ENSATEG00000012140	trnau1apa	98	56.270	ENSTTRG00000001854	TRNAU1AP	98	58.199	Tursiops_truncatus
ENSATEG00000012140	trnau1apa	95	56.000	ENSUAMG00000008789	TRNAU1AP	99	58.000	Ursus_americanus
ENSATEG00000012140	trnau1apa	98	56.270	ENSUMAG00000011068	TRNAU1AP	98	58.199	Ursus_maritimus
ENSATEG00000012140	trnau1apa	98	50.321	ENSVPAG00000006778	TRNAU1AP	97	53.512	Vicugna_pacos
ENSATEG00000012140	trnau1apa	98	55.484	ENSVVUG00000012518	TRNAU1AP	89	58.923	Vulpes_vulpes
ENSATEG00000012140	trnau1apa	99	78.662	ENSXMAG00000017361	trnau1apa	99	79.936	Xiphophorus_maculatus